prot_E-siliculosus-1a_F_contig1216.1374.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1216.1374.1
Unique Nameprot_E-siliculosus-1a_F_contig1216.1374.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length285
Homology
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig1216.1374.1 vs. uniprot
Match: D7G7Z2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7Z2_ECTSI)

HSP 1 Score: 159 bits (401), Expect = 1.880e-41
Identity = 243/284 (85.56%), Postives = 245/284 (86.27%), Query Frame = 0 
Query:    1 MSGVDKLLEIGGSIDVRDTAQRTLLHRACEEASITTVSXXXXXXXXXXXXXXXXXXXXXXXXXXXRLDIVRLLVEKAGADSRARAKVMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAIGPKGHRPLHLAAKEERAVIVELLIGRKADLHAKDDRGRDALHYTDSRRCKERIREAQRREERAAEAQRQLALQKKREXXXXRREQELLDRVDLRARARR 284
            MSGVDKLLEIGGSIDVRDTAQRTLLHRACEEASI TV XXXXXXXXXXXXXXXXXXXXXXXXXXXRL+IVRLLVEKAGADSRARAKVMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX AIGPKGHR                                DALHYTDSRRCKERIREAQRREERAAEAQRQLALQKKR+    RREQELLDRVDLRARARR
Sbjct:  229 MSGVDKLLEIGGSIDVRDTAQRTLLHRACEEASIATVXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLEIVRLLVEKAGADSRARAKVMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAIGPKGHRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDALHYTDSRRCKERIREAQRREERAAEAQRQLALQKKRDDENRRREQELLDRVDLRARARR 512
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1216.1374.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G7Z2_ECTSI1.880e-4185.56Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 231..279
NoneNo IPR availablePFAMPF13637Ank_4coord: 22..74
e-value: 6.0E-11
score: 42.6
NoneNo IPR availablePANTHERPTHR24180FAMILY NOT NAMEDcoord: 125..229
coord: 4..123
coord: 78..151
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 154..184
e-value: 16.0
score: 14.4
coord: 121..150
e-value: 0.0062
score: 25.7
coord: 188..217
e-value: 0.068
score: 22.3
coord: 53..83
e-value: 0.018
score: 24.2
coord: 20..49
e-value: 0.69
score: 19.0
coord: 87..117
e-value: 410.0
score: 7.9
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 121..153
score: 10.846
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 20..52
score: 9.431
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 53..76
score: 9.511
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 188..220
score: 11.968
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 158..219
e-value: 2.5E-8
score: 34.4
coord: 90..151
e-value: 2.2E-9
score: 37.8
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 1..228
score: 52.47
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 103..263
e-value: 1.2E-35
score: 124.5
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 1..102
e-value: 5.5E-26
score: 92.8
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 4..235

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1216contigE-siliculosus-1a_F_contig1216:16422..18973 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1216.1374.1mRNA_E-siliculosus-1a_F_contig1216.1374.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1216 16422..18973 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1216.1374.1 ID=prot_E-siliculosus-1a_F_contig1216.1374.1|Name=mRNA_E-siliculosus-1a_F_contig1216.1374.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=285bp
MSGVDKLLEIGGSIDVRDTAQRTLLHRACEEASITTVSRLLELGATVNAT
EKRKQTPLHRACERGRLDIVRLLVEKAGADSRARAKVMHEPLHVACLGNW
GQVVKFLLSEGNVDVEAVDKNGMRSLHLAVQRNRLEAIRELLKHGCDVEA
TMPDGLTRPLHMACASGYEKAATLLLDHHAEIGAIGPKGHRPLHLAAKEE
RAVIVELLIGRKADLHAKDDRGRDALHYTDSRRCKERIREAQRREERAAE
AQRQLALQKKREEENRRREQELLDRVDLRARARR*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036770Ankyrin_rpt-contain_sf
IPR020683Ankyrin_rpt-contain_dom
IPR002110Ankyrin_rpt