prot_E-siliculosus-1a_F_contig12111.1349.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig12111.1349.1
Unique Nameprot_E-siliculosus-1a_F_contig12111.1349.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length52
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig12111.1349.1 vs. uniprot
Match: A0A6H5K4H2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4H2_9PHAE)

HSP 1 Score: 56.2 bits (134), Expect = 7.430e-8
Identity = 28/49 (57.14%), Postives = 29/49 (59.18%), Query Frame = 0 
Query:    1 FGPGFNEPLAGVVSSWPSLRKLVLGNTFNQPIAQVSWPSSLQELSLGEG 49
            FGPGFNEPLAGVV+SWPSLRK                    QELSLGEG
Sbjct:  316 FGPGFNEPLAGVVASWPSLRKXXXXXXXXXXXXXXXXXXXXQELSLGEG 364
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BLAST of mRNA_E-siliculosus-1a_F_contig12111.1349.1 vs. uniprot
Match: A0A6H5L2G4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2G4_9PHAE)

HSP 1 Score: 50.8 bits (120), Expect = 5.970e-6
Identity = 25/47 (53.19%), Postives = 27/47 (57.45%), Query Frame = 0 
Query:    1 FGPGFNEPLAGVVSSWPSLRKLVLGNTFNQPIAQVSWPSSLQELSLG 47
            FGPGFNEPLAGVVSSWPSLRK                 +SL+ L  G
Sbjct:  322 FGPGFNEPLAGVVSSWPSLRKXXXXXXXXXXXXXXXXXASLRALEFG 368
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig12111.1349.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K4H2_9PHAE7.430e-857.14Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L2G4_9PHAE5.970e-653.19Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008615FNIPPFAMPF05725FNIPcoord: 17..48
e-value: 1.2E-7
score: 31.7

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig12111contigE-siliculosus-1a_F_contig12111:1548..1703 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig12111.1349.1mRNA_E-siliculosus-1a_F_contig12111.1349.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig12111 1548..1703 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig12111.1349.1 ID=prot_E-siliculosus-1a_F_contig12111.1349.1|Name=mRNA_E-siliculosus-1a_F_contig12111.1349.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=52bp
FGPGFNEPLAGVVSSWPSLRKLVLGNTFNQPIAQVSWPSSLQELSLGEGF
HN
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008615FNIP