prot_E-siliculosus-1a_F_contig1211.1347.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1211.1347.1
Unique Nameprot_E-siliculosus-1a_F_contig1211.1347.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length229
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1211.1347.1 vs. uniprot
Match: D7FTS3_ECTSI (CAB/ELIP/HLIP superfamily of protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTS3_ECTSI)

HSP 1 Score: 437 bits (1124), Expect = 8.770e-155
Identity = 226/228 (99.12%), Postives = 228/228 (100.00%), Query Frame = 0
Query:    1 MKAVFALCAAMVAGAQAFVPTTTAFSGARVASPSSASAATTTPRMAAGSFSVFDNAQAEFAAEFPEYSKYGWGPTAKAERWNGRHAMFGWAAIIATGYCQAHNLIPDANVALDPKVWGTLAYTTGTETITNERAIIMMGHVHALAVSVCATVAPLSFQDKLFLDVDAGEKDAPAPGLIPSFVPGLTPEAEIFNGRMAMMGLVVTATTALTTGQSFLEVVNAGLGGLLM 228
            MKAVFALCAAMVAGAQAFVPTTTAFSGARVASP+SASAATTTPRMAAGSFSVFDNAQAEFAAEFPEYSKYGWGPTAKAERWNGRHAMFGWAAIIATGYCQAHNLIPDA+VALDPKVWGTLAYTTGTETITNERAIIMMGHVHALAVSVCATVAPLSFQDKLFLDVDAGEKDAPAPGLIPSFVPGLTPEAEIFNGRMAMMGLVVTATTALTTGQSFLEVVNAGLGGLLM
Sbjct:    1 MKAVFALCAAMVAGAQAFVPTTTAFSGARVASPASASAATTTPRMAAGSFSVFDNAQAEFAAEFPEYSKYGWGPTAKAERWNGRHAMFGWAAIIATGYCQAHNLIPDADVALDPKVWGTLAYTTGTETITNERAIIMMGHVHALAVSVCATVAPLSFQDKLFLDVDAGEKDAPAPGLIPSFVPGLTPEAEIFNGRMAMMGLVVTATTALTTGQSFLEVVNAGLGGLLM 228          
BLAST of mRNA_E-siliculosus-1a_F_contig1211.1347.1 vs. uniprot
Match: A0A6U4CWQ9_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4CWQ9_9STRA)

HSP 1 Score: 227 bits (579), Expect = 9.970e-72
Identity = 111/178 (62.36%), Postives = 136/178 (76.40%), Query Frame = 0
Query:   51 SVFDNAQAEFAAEFPEYSKYGWGPTAKAERWNGRHAMFGWAAIIATGYCQAHNLIPDANVALDPKVWGTLAYTTGTETITNERAIIMMGHVHALAVSVCATVAPLSFQDKLFLDVDAGEKDAPAPGLIPSFVPGLTPEAEIFNGRMAMMGLVVTATTALTTGQSFLEVVNAGLGGLLM 228
            SVFD+A  +F  +FPE+ + GWGPT KAERWNGRHAMFGW AI+ATGY QAH LIPD +  LD K WGTLA   G  TITN RA+I++GH+HAL +SVCAT+APLSFQDKLFL+   GE D PA GLIP+   GLT  AE++NGR+AM+GL+V    ++ +G   L VV+AGLGGLL+
Sbjct:   60 SVFDDATTDFGKQFPEFYQLGWGPTTKAERWNGRHAMFGWVAIVATGYAQAHGLIPDFDKPLDLKEWGTLAIIAGKTTITNGRAVILIGHIHALMMSVCATIAPLSFQDKLFLE--EGEADEPAAGLIPAMDTGLTKSAELWNGRVAMLGLIVLVACSVGSGTPVLNVVDAGLGGLLL 235          
BLAST of mRNA_E-siliculosus-1a_F_contig1211.1347.1 vs. uniprot
Match: A0A6U4CP98_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4CP98_9STRA)

HSP 1 Score: 227 bits (579), Expect = 5.130e-71
Identity = 111/178 (62.36%), Postives = 136/178 (76.40%), Query Frame = 0
Query:   51 SVFDNAQAEFAAEFPEYSKYGWGPTAKAERWNGRHAMFGWAAIIATGYCQAHNLIPDANVALDPKVWGTLAYTTGTETITNERAIIMMGHVHALAVSVCATVAPLSFQDKLFLDVDAGEKDAPAPGLIPSFVPGLTPEAEIFNGRMAMMGLVVTATTALTTGQSFLEVVNAGLGGLLM 228
            SVFD+A  +F  +FPE+ + GWGPT KAERWNGRHAMFGW AI+ATGY QAH LIPD +  LD K WGTLA   G  TITN RA+I++GH+HAL +SVCAT+APLSFQDKLFL+   GE D PA GLIP+   GLT  AE++NGR+AM+GL+V    ++ +G   L VV+AGLGGLL+
Sbjct:  112 SVFDDATTDFGKQFPEFYQLGWGPTTKAERWNGRHAMFGWVAIVATGYAQAHGLIPDFDKPLDLKEWGTLAIIAGKTTITNGRAVILIGHIHALMMSVCATIAPLSFQDKLFLE--EGEADEPAAGLIPAMDTGLTKSAELWNGRVAMLGLIVLVACSVGSGTPVLNVVDAGLGGLLL 287          
BLAST of mRNA_E-siliculosus-1a_F_contig1211.1347.1 vs. uniprot
Match: A0A7S2MHN0_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2MHN0_9STRA)

HSP 1 Score: 214 bits (546), Expect = 6.170e-67
Identity = 109/177 (61.58%), Postives = 132/177 (74.58%), Query Frame = 0
Query:   51 SVFDNAQAEFAAEFPEYSKYGWGPTAKAERWNGRHAMFGWAAIIATGYCQAHNLIPDANVALDPKVWGTLAYTTGTETITNERAIIMMGHVHALAVSVCATVAPLSFQDKLFLDVDAGEKDAPAPGLIPSFVPGLTPEAEIFNGRMAMMGLVVTATTALTTGQSFLEVVNAGLGGLL 227
            SVF +A  EFA ++P  +KYGWGP+ KAERWNGRHAMFGW AI+ TGYCQAH+LIPDA+  LD K WGTLA  +G  TI+NERAII++ HVHAL VSVCAT+AP+   D L L+   GE D PA G+ P F  GLT  AE++NGRMAMMGL+  ++ +L TG SFL  V+  LGGLL
Sbjct:   47 SVFTDATTEFANDYPMMAKYGWGPSTKAERWNGRHAMFGWFAIVCTGYCQAHHLIPDADKLLDLKEWGTLATISGKATISNERAIILIAHVHALMVSVCATMAPM--MDTLLLE--PGEADEPAAGVFPPFETGLTSAAELWNGRMAMMGLITASSYSLMTGTSFLNTVDLWLGGLL 219          
BLAST of mRNA_E-siliculosus-1a_F_contig1211.1347.1 vs. uniprot
Match: A0A835Z6M5_9STRA (CAB/ELIP/HLIP superfamily of protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6M5_9STRA)

HSP 1 Score: 213 bits (541), Expect = 3.310e-66
Identity = 116/224 (51.79%), Postives = 149/224 (66.52%), Query Frame = 0
Query:    4 VFALCAAMVAGAQAFVPTTTAFSGARVASPSSASAATTTPRMAAGSFSVFDNAQAEFAAEFPEYSKYGWGPTAKAERWNGRHAMFGWAAIIATGYCQAHNLIPDANVALDPKVWGTLAYTTGTETITNERAIIMMGHVHALAVSVCATVAPLSFQDKLFLDVDAGEKDAPAPGLIPSFVPGLTPEAEIFNGRMAMMGLVVTATTALTTGQSFLEVVNAGLGGLL 227
            VFAL A ++A   AF+P T A S    A       A   P  ++   SVF +A   F+ ++P++ K GWGPT KAERWNGRHAMFGW  I+ATGY +AH LIPD  VAL+ K WGTL+   G +TI+NERA++++ +VHAL +S+CA  APLSFQD L   +  G+KD PA GLIP+ VPGLT EAE+ NGR+AM+GLV+    +L TG  FL  V+  LG  L
Sbjct:    3 VFALFALLLASVSAFMPATPASSFVAKAG------AAVKPSASSMQMSVFTDATEAFSKDYPDFYKAGWGPTTKAERWNGRHAMFGWVLIVATGYAKAHGLIPDPEVALNLKEWGTLSILAGPQTISNERAVVLIANVHALFMSLCAAFAPLSFQDPLL--IPKGQKDEPAAGLIPAIVPGLTKEAELLNGRLAMLGLVLVMGHSLATGTPFLNSVDLFLGNRL 218          
BLAST of mRNA_E-siliculosus-1a_F_contig1211.1347.1 vs. uniprot
Match: A0A7S2W341_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W341_9STRA)

HSP 1 Score: 201 bits (510), Expect = 1.850e-61
Identity = 100/177 (56.50%), Postives = 126/177 (71.19%), Query Frame = 0
Query:   52 VFDNAQAEFAAEFPEYSKYGWGPTAKAERWNGRHAMFGWAAIIATGYCQAHNLIPDANVALDPKVWGTLAYTTGTETITNERAIIMMGHVHALAVSVCATVAPLSFQDKLFLDVDAGEKDAPAPGLIPSFVPGLTPEAEIFNGRMAMMGLVVTATTALTTGQSFLEVVNAGLGGLLM 228
            VFDNA A+F  ++PE+S  GWGP+ KAERWNGRHAMFGW  II TGY QAH LIP+ +  LD K WGTLA  +GT+TI+NERAII++ +VHA  V + A  APLS+ D L L+   GE D    G+ P F  G+T  AE++NGRMAMMG+V T + +L TG  F++ VN  LGGLL+
Sbjct:   48 VFDNAVAKFKEDYPEFSAAGWGPSTKAERWNGRHAMFGWFFIICTGYAQAHGLIPEGDKLLDLKEWGTLATISGTKTISNERAIILIANVHAFMVGILAAFAPLSYMDTLLLE--DGEADEEPAGVFPPFDTGITSAAELWNGRMAMMGIVTTTSYSLLTGTPFMQTVNLWLGGLLI 222          
BLAST of mRNA_E-siliculosus-1a_F_contig1211.1347.1 vs. uniprot
Match: A0A7S1BP97_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BP97_9STRA)

HSP 1 Score: 200 bits (509), Expect = 6.250e-61
Identity = 100/176 (56.82%), Postives = 126/176 (71.59%), Query Frame = 0
Query:   52 VFDNAQAEFAAEFPEYSKYGWGPTAKAERWNGRHAMFGWAAIIATGYCQAHNLIPDANVALDPKVWGTLAYTTGTETITNERAIIMMGHVHALAVSVCATVAPLSFQDKLFLDVDAGEKDAPAPGLIPSFVPGLTPEAEIFNGRMAMMGLVVTATTALTTGQSFLEVVNAGLGGLL 227
            VF++A  E+ AE+P+++K+GWGP+ KAERWNGRHAMFGW  I+A+ Y   HNLIP+A++ALD K WGTLA  +G  TITNERA+I++ +VHAL VS  A +AP SF D+L L    GE D    GL+P  V GLTPEAEI NGRMAMMGL+    T+       ++VVN  LGGLL
Sbjct:   78 VFEDAMGEWKAEYPKFAKFGWGPSTKAERWNGRHAMFGWFVIVASAYAHGHNLIPNADMALDLKQWGTLATISGKSTITNERAVILIANVHALFVSFLAAMAPSSFADQLLLK--EGEVDEEPYGLVPPLVTGLTPEAEIMNGRMAMMGLIALVGTSAINQMPMVDVVNEWLGGLL 251          
BLAST of mRNA_E-siliculosus-1a_F_contig1211.1347.1 vs. uniprot
Match: A0A8J6CBU4_DIALT (Uncharacterized protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6CBU4_DIALT)

HSP 1 Score: 198 bits (503), Expect = 2.120e-60
Identity = 106/198 (53.54%), Postives = 134/198 (67.68%), Query Frame = 0
Query:   36 ASAATTTPRMAAGSFSVFDNAQAEFAAEFPEYSKYGWGPTAKAERWNGRHAMFGWAAIIATGYCQAHNLIPDANVALDPKVWGTLAYTTGTETITNERAIIMMGHVHALAVSVCATVAPLSFQDKLFLDVDAGEKDAPAPGLIPSFVP-----GLTPEAEIFNGRMAMMGLVVTATTALTTGQSFLEVVNAGLGGLLM 228
            A A+  + R A  + SVF+ A A F  +FPE+SK G+GPT KAERWNGRHAMFGW  I+ATGY Q+HNLIP+ +  LD   WG LA      +ITN RAII++ HVHAL VS+ ++++P  FQD L L++ A E+D  A GL   FVP     GLT  AE+ NGR+AM+GL+     +L TGQ  LEVVN GLGGLL+
Sbjct:   29 AKASAVSARAAPRAASVFEGAMANFEKDFPEFSKRGFGPTTKAERWNGRHAMFGWVVILATGYAQSHNLIPNFDAPLDLSAWGPLARQGDYSSITNGRAIILIAHVHALFVSLASSLSPFGFQDSLTLNMKAAERDEAAYGL---FVPIPGQAGLTAAAEMMNGRLAMLGLIAAVGASLATGQPLLEVVNTGLGGLLL 223          
BLAST of mRNA_E-siliculosus-1a_F_contig1211.1347.1 vs. uniprot
Match: A0A7S3Q4Z5_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q4Z5_9STRA)

HSP 1 Score: 196 bits (497), Expect = 1.660e-59
Identity = 101/198 (51.01%), Postives = 129/198 (65.15%), Query Frame = 0
Query:   34 SSASAATTTPRMAAGSFSVFDNAQAEFAAEFPEYSKYGWGPTAKAERWNGRHAMFGWAAIIATGYCQAHNLIPDANVALDPKVWGTLAYTTGTETITNERAIIMMGHVHALAVSVCATVAPLSFQDKLFLDVDAGE-----KDAPAPGLIPSFVPGLTPEAEIFNGRMAMMGLVVTATTALTTGQSFLEVVNAGLGGL 226
            S+ S  T  P ++  S  VFD A A++ AE+P+++K+GWGP+ +AE+WNGRHAMFGW  I AT Y + H LIPDA+  L+ K WGTLA  +G  TITNERAII+M +VH   V + AT+ PL F D L LD + GE     K   A G++P    GLT EAEI NGRMAMMGL+    T+   G+  L VVN  +GGL
Sbjct:   24 STLSVRTAAPVVSETSLEVFDKAMADWEAEYPQFAKWGWGPSVQAEKWNGRHAMFGWVFICATAYAKGHGLIPDADTVLNLKEWGTLATISGKNTITNERAIILMANVHCFCVGLLATICPLPFSDPLLLDPNQGEMYEKAKATKAYGVLPEMKTGLTEEAEIMNGRMAMMGLITLTATSFIEGKDMLTVVNDWVGGL 221          
BLAST of mRNA_E-siliculosus-1a_F_contig1211.1347.1 vs. uniprot
Match: A0A7S3JY58_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JY58_9STRA)

HSP 1 Score: 193 bits (491), Expect = 1.010e-58
Identity = 97/179 (54.19%), Postives = 124/179 (69.27%), Query Frame = 0
Query:   51 SVFDNAQAEFAAEFPEYSKYGWGPTAKAERWNGRHAMFGWAAIIATGYCQAHNLIPDANVALDPKVWGTLAYTTG-TETITNERAIIMMGHVHALAVSVCATVAPLSFQDKLFLDVDAGEKDAPAPGLIPSFVPGLTPEAEIFNGRMAMMGLVVTATTALTTGQSFLEVVNAGLGGLLM 228
            S F  A  +F +++P ++ YGWG + KAERWNGRHAMFGW  II TGY Q+H LIPDA+  LD  VWGTLA  T    TITNERAII++ ++HAL VS+CA  AP   QDKL L+   GE D    G+IP F PGL P+AE+ NGR+AM+G+   +  +L  G  F++VVN+ LGGLL+
Sbjct:   37 SPFTEATDKFKSDYPSFAAYGWGVSPKAERWNGRHAMFGWFFIICTGYAQSHGLIPDADKTLDLSVWGTLAQITPRVSTITNERAIILVANIHALMVSLCAAFAPFPTQDKLLLE--PGEADEDPAGIIPKFTPGLNPDAEMINGRLAMLGITTVSAYSLIYGVPFMDVVNSMLGGLLL 213          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1211.1347.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FTS3_ECTSI8.770e-15599.12CAB/ELIP/HLIP superfamily of protein n=2 Tax=Ectoc... [more]
A0A6U4CWQ9_9STRA9.970e-7262.36Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A6U4CP98_9STRA5.130e-7162.36Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S2MHN0_9STRA6.170e-6761.58Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A835Z6M5_9STRA3.310e-6651.79CAB/ELIP/HLIP superfamily of protein n=1 Tax=Tribo... [more]
A0A7S2W341_9STRA1.850e-6156.50Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S1BP97_9STRA6.250e-6156.82Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
A0A8J6CBU4_DIALT2.120e-6053.54Uncharacterized protein n=2 Tax=Diacronema lutheri... [more]
A0A7S3Q4Z5_9STRA1.660e-5951.01Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A7S3JY58_9STRA1.010e-5854.19Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR022796Chlorophyll A-B binding proteinPFAMPF00504Chloroa_b-bindcoord: 76..206
e-value: 8.1E-6
score: 26.5
IPR023329Chlorophyll a/b binding domain superfamilyGENE3D1.10.3460.10coord: 53..223
e-value: 6.3E-8
score: 34.8
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..13
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 18..228
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..17
score: 0.759
NoneNo IPR availableSUPERFAMILY103511Chlorophyll a-b binding proteincoord: 57..220

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1211contigE-siliculosus-1a_F_contig1211:16074..20749 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1211.1347.1mRNA_E-siliculosus-1a_F_contig1211.1347.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1211 16074..22081 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1211.1347.1 ID=prot_E-siliculosus-1a_F_contig1211.1347.1|Name=mRNA_E-siliculosus-1a_F_contig1211.1347.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=229bp
MKAVFALCAAMVAGAQAFVPTTTAFSGARVASPSSASAATTTPRMAAGSF
SVFDNAQAEFAAEFPEYSKYGWGPTAKAERWNGRHAMFGWAAIIATGYCQ
AHNLIPDANVALDPKVWGTLAYTTGTETITNERAIIMMGHVHALAVSVCA
TVAPLSFQDKLFLDVDAGEKDAPAPGLIPSFVPGLTPEAEIFNGRMAMMG
LVVTATTALTTGQSFLEVVNAGLGGLLM*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023329Chlorophyll_a/b-bd_dom_sf
IPR022796Chloroa_b-bind