prot_E-siliculosus-1a_F_contig12056.1317.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig12056.1317.1
Unique Nameprot_E-siliculosus-1a_F_contig12056.1317.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length65
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig12056.1317.1 vs. uniprot
Match: D1J6Z8_ECTSI (Uncharacterized protein ycf33 n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D1J6Z8_ECTSI)

HSP 1 Score: 121 bits (303), Expect = 7.330e-35
Identity = 63/64 (98.44%), Postives = 63/64 (98.44%), Query Frame = 0
Query:    1 MVFWDNLLRYPRFFVSSMIGLILVLINPLIVVLKKFDDKKLIYIVFISGLIALFCILKEMLNLE 64
            MVFWDNLLRYPRFFVSSMIGLILVLINPLI VLKKFDDKKLIYIVFISGLIALFCILKEMLNLE
Sbjct:    1 MVFWDNLLRYPRFFVSSMIGLILVLINPLIAVLKKFDDKKLIYIVFISGLIALFCILKEMLNLE 64          
BLAST of mRNA_E-siliculosus-1a_F_contig12056.1317.1 vs. uniprot
Match: A0A344PFF7_9PHAE (Uncharacterized protein ycf33 n=3 Tax=Scytosiphonaceae TaxID=2891 RepID=A0A344PFF7_9PHAE)

HSP 1 Score: 106 bits (264), Expect = 6.580e-29
Identity = 50/64 (78.12%), Postives = 59/64 (92.19%), Query Frame = 0
Query:    1 MVFWDNLLRYPRFFVSSMIGLILVLINPLIVVLKKFDDKKLIYIVFISGLIALFCILKEMLNLE 64
            M+FWDNLLRYPRFF+SSMIGLIL+LINP++V+LKKFDDKK+IYI FIS ++ LFCILK MLN E
Sbjct:    1 MIFWDNLLRYPRFFLSSMIGLILILINPIVVILKKFDDKKIIYIFFISVVVTLFCILKAMLNFE 64          
BLAST of mRNA_E-siliculosus-1a_F_contig12056.1317.1 vs. uniprot
Match: A0A5A4MNY1_9PHAE (Uncharacterized protein ycf33 n=1 Tax=Hapterophycus canaliculatus TaxID=2567908 RepID=A0A5A4MNY1_9PHAE)

HSP 1 Score: 104 bits (260), Expect = 2.680e-28
Identity = 49/64 (76.56%), Postives = 59/64 (92.19%), Query Frame = 0
Query:    1 MVFWDNLLRYPRFFVSSMIGLILVLINPLIVVLKKFDDKKLIYIVFISGLIALFCILKEMLNLE 64
            MVFWDN+LRYPRFF+SSMIGLILVLINP++V+LKKFDDKK+IY+ FI  L++LFCILK MLN +
Sbjct:    1 MVFWDNILRYPRFFLSSMIGLILVLINPIVVILKKFDDKKIIYVFFIGVLVSLFCILKAMLNFD 64          
BLAST of mRNA_E-siliculosus-1a_F_contig12056.1317.1 vs. uniprot
Match: A0A1I9LW10_9PHAE (Uncharacterized protein ycf33 n=1 Tax=Pleurocladia lacustris TaxID=246121 RepID=A0A1I9LW10_9PHAE)

HSP 1 Score: 102 bits (254), Expect = 2.210e-27
Identity = 50/64 (78.12%), Postives = 56/64 (87.50%), Query Frame = 0
Query:    1 MVFWDNLLRYPRFFVSSMIGLILVLINPLIVVLKKFDDKKLIYIVFISGLIALFCILKEMLNLE 64
            M+FWDNLLRYPRFF+SSM+GLILVLINP+I+ LKKFDDKK+IYI     LI LFCILKEMLN E
Sbjct:    1 MIFWDNLLRYPRFFISSMLGLILVLINPMIIWLKKFDDKKIIYIXXXXXLITLFCILKEMLNFE 64          
BLAST of mRNA_E-siliculosus-1a_F_contig12056.1317.1 vs. uniprot
Match: A0A6B7F270_9PHAE (Uncharacterized protein ycf33 n=1 Tax=Cladosiphon okamuranus TaxID=309737 RepID=A0A6B7F270_9PHAE)

HSP 1 Score: 95.9 bits (237), Expect = 8.680e-25
Identity = 47/64 (73.44%), Postives = 54/64 (84.38%), Query Frame = 0
Query:    1 MVFWDNLLRYPRFFVSSMIGLILVLINPLIVVLKKFDDKKLIYIVFISGLIALFCILKEMLNLE 64
            MVFWDNLLRYPRFF+SSMIGLILV+INP+I   KKF+DKK+IY+     LI LFCILKEMLN +
Sbjct:    1 MVFWDNLLRYPRFFISSMIGLILVVINPIINQFKKFNDKKIIYLFLFISLITLFCILKEMLNFD 64          
BLAST of mRNA_E-siliculosus-1a_F_contig12056.1317.1 vs. uniprot
Match: A0A8F0JYS8_9PHAE (Uncharacterized protein ycf33 n=8 Tax=Laminariales TaxID=2886 RepID=A0A8F0JYS8_9PHAE)

HSP 1 Score: 95.5 bits (236), Expect = 1.230e-24
Identity = 46/64 (71.88%), Postives = 56/64 (87.50%), Query Frame = 0
Query:    1 MVFWDNLLRYPRFFVSSMIGLILVLINPLIVVLKKFDDKKLIYIVFISGLIALFCILKEMLNLE 64
            MVFWDNLLRYPRFF+SSMIGLIL+L+ P+I  LKKF+DK++++   IS LI LFCILKEMLN+E
Sbjct:    1 MVFWDNLLRYPRFFISSMIGLILILLTPIINQLKKFNDKRIVFFFLISILITLFCILKEMLNIE 64          
BLAST of mRNA_E-siliculosus-1a_F_contig12056.1317.1 vs. uniprot
Match: A0A0S0GM32_COSCS (Uncharacterized protein ycf33 n=12 Tax=Laminariales TaxID=2886 RepID=A0A0S0GM32_COSCS)

HSP 1 Score: 90.5 bits (223), Expect = 1.190e-22
Identity = 43/64 (67.19%), Postives = 55/64 (85.94%), Query Frame = 0
Query:    1 MVFWDNLLRYPRFFVSSMIGLILVLINPLIVVLKKFDDKKLIYIVFISGLIALFCILKEMLNLE 64
            MVFWDNLLRYPRFF+SSM+GL+L+L+ P++  LKKF+DKK+I+   IS LI LFCILK ML++E
Sbjct:    1 MVFWDNLLRYPRFFISSMLGLVLILLTPILEQLKKFNDKKIIFFFVISILITLFCILKGMLSME 64          
BLAST of mRNA_E-siliculosus-1a_F_contig12056.1317.1 vs. uniprot
Match: A0A0R6M2R2_UNDPI (Uncharacterized protein ycf33 n=4 Tax=Laminariales TaxID=2886 RepID=A0A0R6M2R2_UNDPI)

HSP 1 Score: 90.1 bits (222), Expect = 1.690e-22
Identity = 46/64 (71.88%), Postives = 53/64 (82.81%), Query Frame = 0
Query:    1 MVFWDNLLRYPRFFVSSMIGLILVLINPLIVVLKKFDDKKLIYIVFISGLIALFCILKEMLNLE 64
            MVFWDNLLRYPRFF+SSM+GLIL+L+ P+I  LKKF DKK+IY   IS LI LF ILKEML+ E
Sbjct:    1 MVFWDNLLRYPRFFISSMLGLILILLTPIIEQLKKFKDKKIIYFFLISILITLFYILKEMLSTE 64          
BLAST of mRNA_E-siliculosus-1a_F_contig12056.1317.1 vs. uniprot
Match: A0A8F0F926_9PHAE (Uncharacterized protein ycf33 n=2 Tax=Laminariaceae TaxID=33636 RepID=A0A8F0F926_9PHAE)

HSP 1 Score: 89.0 bits (219), Expect = 4.840e-22
Identity = 42/64 (65.62%), Postives = 54/64 (84.38%), Query Frame = 0
Query:    1 MVFWDNLLRYPRFFVSSMIGLILVLINPLIVVLKKFDDKKLIYIVFISGLIALFCILKEMLNLE 64
            M+FWDNLLRYPRFF+SSM+GLIL+L+ P+I   KKF+DKK+I+   IS LI LFCILK ML+++
Sbjct:    1 MIFWDNLLRYPRFFISSMLGLILILLTPIIEQFKKFNDKKIIFFFLISILITLFCILKGMLSID 64          
BLAST of mRNA_E-siliculosus-1a_F_contig12056.1317.1 vs. uniprot
Match: A0A8F0F9R8_9PHAE (Uncharacterized protein ycf33 n=1 Tax=Chorda asiatica TaxID=1281577 RepID=A0A8F0F9R8_9PHAE)

HSP 1 Score: 83.2 bits (204), Expect = 9.400e-20
Identity = 40/64 (62.50%), Postives = 51/64 (79.69%), Query Frame = 0
Query:    1 MVFWDNLLRYPRFFVSSMIGLILVLINPLIVVLKKFDDKKLIYIVFISGLIALFCILKEMLNLE 64
            M+FWDNLLRYPRFF+SSM+GLIL+L+ P++  LKKF+D+K+     IS L  LF ILK MLN+E
Sbjct:    1 MIFWDNLLRYPRFFISSMVGLILILVTPILDQLKKFNDRKIYIFFLISFLFGLFSILKGMLNVE 64          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig12056.1317.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D1J6Z8_ECTSI7.330e-3598.44Uncharacterized protein ycf33 n=2 Tax=Ectocarpus s... [more]
A0A344PFF7_9PHAE6.580e-2978.13Uncharacterized protein ycf33 n=3 Tax=Scytosiphona... [more]
A0A5A4MNY1_9PHAE2.680e-2876.56Uncharacterized protein ycf33 n=1 Tax=Hapterophycu... [more]
A0A1I9LW10_9PHAE2.210e-2778.13Uncharacterized protein ycf33 n=1 Tax=Pleurocladia... [more]
A0A6B7F270_9PHAE8.680e-2573.44Uncharacterized protein ycf33 n=1 Tax=Cladosiphon ... [more]
A0A8F0JYS8_9PHAE1.230e-2471.88Uncharacterized protein ycf33 n=8 Tax=Laminariales... [more]
A0A0S0GM32_COSCS1.190e-2267.19Uncharacterized protein ycf33 n=12 Tax=Laminariale... [more]
A0A0R6M2R2_UNDPI1.690e-2271.88Uncharacterized protein ycf33 n=4 Tax=Laminariales... [more]
A0A8F0F926_9PHAE4.840e-2265.63Uncharacterized protein ycf33 n=2 Tax=Laminariacea... [more]
A0A8F0F9R8_9PHAE9.400e-2062.50Uncharacterized protein ycf33 n=1 Tax=Chorda asiat... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008470Uncharacterised protein family Ycf33PFAMPF05421DUF751coord: 3..62
e-value: 8.3E-20
score: 71.3
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 62..64
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..33
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 34..39
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 40..61
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..11
NoneNo IPR availableTMHMMTMhelixcoord: 41..63
NoneNo IPR availableTMHMMTMhelixcoord: 13..31

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig12056contigE-siliculosus-1a_F_contig12056:10..204 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig12056.1317.1mRNA_E-siliculosus-1a_F_contig12056.1317.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig12056 10..204 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig12056.1317.1 ID=prot_E-siliculosus-1a_F_contig12056.1317.1|Name=mRNA_E-siliculosus-1a_F_contig12056.1317.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=65bp
MVFWDNLLRYPRFFVSSMIGLILVLINPLIVVLKKFDDKKLIYIVFISGL
IALFCILKEMLNLE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008470Uncharacterised_Ycf33