prot_E-siliculosus-1a_F_contig1205.1314.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1205.1314.1
Unique Nameprot_E-siliculosus-1a_F_contig1205.1314.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length108
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1205.1314.1 vs. uniprot
Match: A0A6H5KPY7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPY7_9PHAE)

HSP 1 Score: 100 bits (249), Expect = 1.790e-22
Identity = 52/79 (65.82%), Postives = 59/79 (74.68%), Query Frame = 0
Query:   30 SSDGWGPAVASGDATKLTELVLVWSGSKPERALSILRSCISLMEKEVACSAPASSLLHWPHTTPGPTRNSCLNAFTVAL 108
            S D WG AVA+GDATKL ELVLVWSGS+PE ALS+LR C+ L+E+E A S P SS L  P  T GPTR+SCL   TVAL
Sbjct:   66 SPDKWGLAVATGDATKLAELVLVWSGSRPEAALSLLRECVLLLEEEAAFSVPDSSPLQSPSCTLGPTRSSCLKTLTVAL 144          
BLAST of mRNA_E-siliculosus-1a_F_contig1205.1314.1 vs. uniprot
Match: D7FUL5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUL5_ECTSI)

HSP 1 Score: 94.7 bits (234), Expect = 3.850e-21
Identity = 52/74 (70.27%), Postives = 56/74 (75.68%), Query Frame = 0
Query:   35 GPAVASGDATKLTELVLVWSGSKPERALSILRSCISLMEKEVACSAPASSLLHWPHTTPGPTRNSCLNAFTVAL 108
            G AVASG ATKL ELVLVWS SKPERALSI R+C+SL+EKE A SA  SS L    T PGP R+SCLNA  VAL
Sbjct:   71 GSAVASGAATKLAELVLVWSVSKPERALSIARTCVSLLEKEDAHSASGSSPLXXXSTAPGPGRSSCLNAIVVAL 144          
BLAST of mRNA_E-siliculosus-1a_F_contig1205.1314.1 vs. uniprot
Match: D7FH80_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH80_ECTSI)

HSP 1 Score: 89.0 bits (219), Expect = 4.070e-21
Identity = 44/63 (69.84%), Postives = 50/63 (79.37%), Query Frame = 0
Query:   32 DGWGPAVASGDATKLTELVLVWSGSKPERALSILRSCISLMEKEVACSAPASSLLHWPHTTPG 94
            D WGPAVASGDATKL ELVL+WSG KPERALS++R C+S++EKEVA S P SS L    TT G
Sbjct:   13 DEWGPAVASGDATKLAELVLLWSGLKPERALSVIRDCVSVLEKEVALSTPGSSPLRATPTTLG 75          
BLAST of mRNA_E-siliculosus-1a_F_contig1205.1314.1 vs. uniprot
Match: D7G2S9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2S9_ECTSI)

HSP 1 Score: 83.2 bits (204), Expect = 1.650e-16
Identity = 41/66 (62.12%), Postives = 51/66 (77.27%), Query Frame = 0
Query:   43 ATKLTELVLVWSGSKPERALSILRSCISLMEKEVACSAPASSLLHWPHTTPGPTRNSCLNAFTVAL 108
            AT+L +LVLVWSGS+PE ALSIL+ C+SL+EKE A SAPA   +    T PGP+R+SCLNA  +AL
Sbjct:   56 ATRLAQLVLVWSGSEPEPALSILKDCVSLLEKEFAFSAPAFPAVPLLPTMPGPSRSSCLNALVIAL 121          
BLAST of mRNA_E-siliculosus-1a_F_contig1205.1314.1 vs. uniprot
Match: D7FTA8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTA8_ECTSI)

HSP 1 Score: 77.8 bits (190), Expect = 4.830e-16
Identity = 40/63 (63.49%), Postives = 46/63 (73.02%), Query Frame = 0
Query:   32 DGWGPAVASGDATKLTELVLVWSGSKPERALSILRSCISLMEKEVACSAPASSLLHWPHTTPG 94
            D WG AVASGDAT L ELVL+W G  P  ALSILR C++++EKEVA SAP SS L  P T+ G
Sbjct:   13 DAWGSAVASGDATGLAELVLLWCGVLPHPALSILRRCVAVLEKEVALSAPTSSPLPSPQTSRG 75          
BLAST of mRNA_E-siliculosus-1a_F_contig1205.1314.1 vs. uniprot
Match: D7FH98_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH98_ECTSI)

HSP 1 Score: 53.9 bits (128), Expect = 3.130e-6
Identity = 26/48 (54.17%), Postives = 36/48 (75.00%), Query Frame = 0
Query:   32 DGWGPAVASGDATKLTELVLVWSGSKPERALSILRSCISLMEKEVACS 79
            D W  AVA GDA KL++LVL  +GS  E ALSIL+SC++++EK+ A +
Sbjct:    2 DEWNSAVAGGDAEKLSDLVLSSAGSSTEAALSILKSCVTILEKKQAAA 49          
BLAST of mRNA_E-siliculosus-1a_F_contig1205.1314.1 vs. uniprot
Match: A0A6H5KI43_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KI43_9PHAE)

HSP 1 Score: 52.0 bits (123), Expect = 1.880e-5
Identity = 24/43 (55.81%), Postives = 34/43 (79.07%), Query Frame = 0
Query:   32 DGWGPAVASGDATKLTELVLVWSGSKPERALSILRSCISLMEK 74
            D W  AVA GDA KL++LVL+ +GS  + ALSIL+SC++++EK
Sbjct:    2 DEWKSAVAGGDAAKLSDLVLLSAGSSTDAALSILKSCVTMLEK 44          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1205.1314.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A6H5KPY7_9PHAE1.790e-2265.82Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FUL5_ECTSI3.850e-2170.27Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FH80_ECTSI4.070e-2169.84Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G2S9_ECTSI1.650e-1662.12Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FTA8_ECTSI4.830e-1663.49Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FH98_ECTSI3.130e-654.17Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KI43_9PHAE1.880e-555.81Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 16..108
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..10
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 11..15
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..15

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1205contigE-siliculosus-1a_F_contig1205:26058..32370 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1205.1314.1mRNA_E-siliculosus-1a_F_contig1205.1314.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1205 26043..32370 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1205.1314.1 ID=prot_E-siliculosus-1a_F_contig1205.1314.1|Name=mRNA_E-siliculosus-1a_F_contig1205.1314.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=108bp
MLLRVCVFLLEKEVAFSNPASSPLQTPPTSSDGWGPAVASGDATKLTELV
LVWSGSKPERALSILRSCISLMEKEVACSAPASSLLHWPHTTPGPTRNSC
LNAFTVAL
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