prot_E-siliculosus-1a_F_contig1193.1232.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1193.1232.1
Unique Nameprot_E-siliculosus-1a_F_contig1193.1232.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length179
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1193.1232.1 vs. uniprot
Match: D7FHG3_ECTSI (40S ribosomal protein S8 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FHG3_ECTSI)

HSP 1 Score: 354 bits (909), Expect = 3.120e-123
Identity = 176/178 (98.88%), Postives = 176/178 (98.88%), Query Frame = 0
Query:    1 MGRPAANTKLGHKRVHPVRCRGGNMKYRALRLDSGNFSWGTEVCTRKTRILDVVYNASNNELVRTKTLVKNAIVVVDAHPFKHWYENHYGVTIGLKKGKKAAPVEEEAVAKSDHVKRKLAKRQADRTLSTLLDEQVASGRFLACISSRPGQSGRCDGYILEGKELEFYQKMLAKKKSK 178
            MGRPAANTKLGHKRVHPVRCRGGNMKYRALRLDSGNFSWGTEVCTRKTRILDVVYNASNNELVRTKTLVKNAIVVVDAHPFKHWYENHYGV IGLKKGKKAAPVEEEAVAKSDHVKRKLAKRQ DRTLSTLLDEQVASGRFLACISSRPGQSGRCDGYILEGKELEFYQKMLAKKKSK
Sbjct:   29 MGRPAANTKLGHKRVHPVRCRGGNMKYRALRLDSGNFSWGTEVCTRKTRILDVVYNASNNELVRTKTLVKNAIVVVDAHPFKHWYENHYGVVIGLKKGKKAAPVEEEAVAKSDHVKRKLAKRQTDRTLSTLLDEQVASGRFLACISSRPGQSGRCDGYILEGKELEFYQKMLAKKKSK 206          
BLAST of mRNA_E-siliculosus-1a_F_contig1193.1232.1 vs. uniprot
Match: A0A836CLT8_9STRA (40S ribosomal protein S8 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLT8_9STRA)

HSP 1 Score: 275 bits (704), Expect = 6.550e-92
Identity = 136/183 (74.32%), Postives = 154/183 (84.15%), Query Frame = 0
Query:    1 MGRPAANTKLGHKRVHPVRCRGGNMKYRALRLDSGNFSWGTEVCTRKTRILDVVYNASNNELVRTKTLVKNAIVVVDAHPFKHWYENHYGVTIGLKKGK-----KAAPVEEEAVAKSDHVKRKLAKRQADRTLSTLLDEQVASGRFLACISSRPGQSGRCDGYILEGKELEFYQKMLAKKKSK 178
            +GRPAANTK+G  R+  VRCRGGN+K+RALRL++GN+SWGTEVCTRKTRILDVVYNASNNELVRTKTLVK A+V +DA PF+ WYE HYG+ IG+KKGK     KAA   +E   KSDHV+RKLA RQ  R L TLLDEQ ASGR LACISSRPGQSGRCDGYILEGKELEFYQK+L++KK K
Sbjct:   29 LGRPAANTKMGATRIRTVRCRGGNLKFRALRLETGNYSWGTEVCTRKTRILDVVYNASNNELVRTKTLVKGAVVSIDATPFRQWYEAHYGIAIGVKKGKRAAAGKAAATTDEEAKKSDHVQRKLAARQKTRALDTLLDEQFASGRILACISSRPGQSGRCDGYILEGKELEFYQKILSRKKGK 211          
BLAST of mRNA_E-siliculosus-1a_F_contig1193.1232.1 vs. uniprot
Match: A0A7S2USH6_9STRA (40S ribosomal protein S8 n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2USH6_9STRA)

HSP 1 Score: 271 bits (692), Expect = 8.330e-90
Identity = 135/179 (75.42%), Postives = 149/179 (83.24%), Query Frame = 0
Query:    1 MGRPAANTKLGHKRVHPVRCRGGNMKYRALRLDSGNFSWGTEVCTRKTRILDVVYNASNNELVRTKTLVKNAIVVVDAHPFKHWYENHYGVTIGLKKGK---KAAPVEEEAVAKSDHVKRKLAKRQADRTLSTLLDEQVASGRFLACISSRPGQSGRCDGYILEGKELEFYQKMLAKKK 176
            MGRPAANTKLG KRVHPVRC GGNMKYRA+RL++G +SWGTE  +RK RILDVVYNASNNELVRTKTLVKNA+V++DAHPFK WYE HYGV IG KKGK   K    ++E   KS HV+RK+AKRQ DRTL   LD+Q   GR LACISSRPGQSGR DGYILEGKELEFYQKMLA+KK
Sbjct:   49 MGRPAANTKLGTKRVHPVRCMGGNMKYRAMRLEAGTYSWGTEAISRKARILDVVYNASNNELVRTKTLVKNAVVLIDAHPFKAWYEAHYGVVIGKKKGKRMPKKDEADDEDAKKSSHVQRKIAKRQKDRTLMQNLDDQFVGGRLLACISSRPGQSGRADGYILEGKELEFYQKMLARKK 227          
BLAST of mRNA_E-siliculosus-1a_F_contig1193.1232.1 vs. uniprot
Match: A0A812SFI7_SYMMI (40S ribosomal protein S8 n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812SFI7_SYMMI)

HSP 1 Score: 263 bits (672), Expect = 4.240e-87
Identity = 127/176 (72.16%), Postives = 147/176 (83.52%), Query Frame = 0
Query:    1 MGRPAANTKLGHKRVHPVRCRGGNMKYRALRLDSGNFSWGTEVCTRKTRILDVVYNASNNELVRTKTLVKNAIVVVDAHPFKHWYENHYGVTIGLKKGKKAAPVEEEAVAKSDHVKRKLAKRQADRTLSTLLDEQVASGRFLACISSRPGQSGRCDGYILEGKELEFYQKMLAKKK 176
            +GRP ANTKLG  R+H VRCRGGN+K+RA+RLD+GNFSWG+EVCTRKTR+LDVVYNASNNELVRTKTLVKN+I+ VDA PF+ WYE HYGV +G+KK KK A   E+   KS  ++RKLA+RQ  RTL   LD+  +SGR LACISSRPGQSGRCDGYILEGKEL+FY KML KKK
Sbjct:   29 LGRPPANTKLGASRIHTVRCRGGNLKFRAMRLDTGNFSWGSEVCTRKTRVLDVVYNASNNELVRTKTLVKNSIIQVDATPFRAWYEQHYGVKVGVKKAKKTAAEGEDTEKKSHSLQRKLAERQKTRTLDPALDDGFSSGRLLACISSRPGQSGRCDGYILEGKELDFYSKMLKKKK 204          
BLAST of mRNA_E-siliculosus-1a_F_contig1193.1232.1 vs. uniprot
Match: A0A7S1Z304_TRICV (40S ribosomal protein S8 n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1Z304_TRICV)

HSP 1 Score: 260 bits (664), Expect = 5.720e-86
Identity = 130/175 (74.29%), Postives = 146/175 (83.43%), Query Frame = 0
Query:    1 MGRPAANTKLGHKRVHPVRCRGGNMKYRALRLDSGNFSWGTEVCTRKTRILDVVYNASNNELVRTKTLVKNAIVVVDAHPFKHWYENHYGVTIGLKKGKKAAPVEEEAVAKSDHVKRKLAKRQADRTLSTLLDEQVASGRFLACISSRPGQSGRCDGYILEGKELEFYQKMLAKK 175
            +GRPAA TK+G KRVH VRCRGGN+K+RALRLDSGNFSWGTEVCTRK RILDV YNASNNELVRTKTLVK AIV++DAHPFK WYE HYGV IG+KKG+KA   +EEA  KS+ V+RKLA RQ +RTL   LD Q ASGR LA I+SRPGQ GRCDG +LEG EL FYQ+ +AKK
Sbjct:   29 LGRPAAMTKIGEKRVHEVRCRGGNLKFRALRLDSGNFSWGTEVCTRKVRILDVTYNASNNELVRTKTLVKGAIVLIDAHPFKEWYEAHYGVKIGVKKGQKAH-ADEEAPKKSERVQRKLAARQKNRTLEQPLDHQFASGRLLAKITSRPGQCGRCDGVVLEGAELHFYQRQMAKK 202          
BLAST of mRNA_E-siliculosus-1a_F_contig1193.1232.1 vs. uniprot
Match: B8CB96_THAPS (40S ribosomal protein S8 n=2 Tax=Ochrophyta TaxID=2696291 RepID=B8CB96_THAPS)

HSP 1 Score: 259 bits (663), Expect = 7.590e-86
Identity = 129/174 (74.14%), Postives = 145/174 (83.33%), Query Frame = 0
Query:    1 MGRPAANTKLGHKRVHPVRCRGGNMKYRALRLDSGNFSWGTEVCTRKTRILDVVYNASNNELVRTKTLVKNAIVVVDAHPFKHWYENHYGVTIGLKKGKKAAPVEEEAVAKSDHVKRKLAKRQADRTLSTLLDEQVASGRFLACISSRPGQSGRCDGYILEGKELEFYQKMLAK 174
            +GRPAA TK+G KR+H VRCRGGN+K+RALRLDSGNFSWGTEVCTRK R+LDVVYNASNNELVRTKTLVK AIV+VDAHPFK WYE+HYGV IG+KKG+ AA  EEE V +S HV+RKLA RQ  R+L   +D Q+ASGR  A I+SRPGQSGRCDG ILEG EL FY K L K
Sbjct:   29 LGRPAAMTKIGEKRIHTVRCRGGNLKFRALRLDSGNFSWGTEVCTRKVRVLDVVYNASNNELVRTKTLVKGAIVLVDAHPFKSWYESHYGVKIGIKKGQAAA--EEEEVKQSSHVQRKLAARQKGRSLEDAIDHQIASGRLYAKITSRPGQSGRCDGQILEGAELSFYLKQLKK 200          
BLAST of mRNA_E-siliculosus-1a_F_contig1193.1232.1 vs. uniprot
Match: A0A7S2JRG2_9STRA (40S ribosomal protein S8 n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2JRG2_9STRA)

HSP 1 Score: 259 bits (662), Expect = 1.110e-85
Identity = 131/175 (74.86%), Postives = 144/175 (82.29%), Query Frame = 0
Query:    1 MGRPAANTKLGHKRVHPVRCRGGNMKYRALRLDSGNFSWGTEVCTRKTRILDVVYNASNNELVRTKTLVKNAIVVVDAHPFKHWYENHYGVTIGLKKGKKAAPVEEEAVAKSDHVKRKLAKRQADRTLSTLLDEQVASGRFLACISSRPGQSGRCDGYILEGKELEFYQKMLAKK 175
            MGRPAA TK+G KRV  VRCRGGNMKYRALRLD+GNFSWGTEVCTRK RILDV YNASNNELVRTKTLVK AIV+VD HPFK WYE+HYGV  GL+  K   PV+E+   KS+HV+RKLA RQ  R+L   LD Q+ASGRFLA I+SRPGQSGRCDG ILEG EL FYQKM+ KK
Sbjct:   29 MGRPAAMTKIGEKRVREVRCRGGNMKYRALRLDTGNFSWGTEVCTRKVRILDVTYNASNNELVRTKTLVKGAIVLVDCHPFKTWYESHYGVKTGLRGAK--PPVDEDEAKKSNHVQRKLAARQKTRSLEPTLDSQLASGRFLAKITSRPGQSGRCDGVILEGPELAFYQKMMHKK 201          
BLAST of mRNA_E-siliculosus-1a_F_contig1193.1232.1 vs. uniprot
Match: A0A6V2QD30_HETAK (40S ribosomal protein S8 n=2 Tax=Sar TaxID=2698737 RepID=A0A6V2QD30_HETAK)

HSP 1 Score: 259 bits (662), Expect = 1.270e-85
Identity = 132/176 (75.00%), Postives = 146/176 (82.95%), Query Frame = 0
Query:    1 MGRPAANTKLGHKRVHPVRCRGGNMKYRALRLDSGNFSWGTEVCTRKTRILDVVYNASNNELVRTKTLVKNAIVVVDAHPFKHWYENHYGVTIGLKKGKKAAPVEEEAVAKSDHVKRKLAKRQADRTLSTLLDEQVASGRFLACISSRPGQSGRCDGYILEGKELEFYQKMLAKKK 176
            +GR +ANTKLG KRVH VRC GGN K+RA+RL++G FSWGTE  +RKT+ILDVVYNASNNELVRTKTLVK AI+ +DA P + WYE HYGV IG KKGKKAA  EEEAVAKS HV RK A+R   RTL  LLDEQ A+GR LA ISSRPGQSGRCDGY+LEGKELEFYQK LAKKK
Sbjct:   29 LGRQSANTKLGAKRVHEVRCMGGNKKFRAIRLETGTFSWGTEAISRKTKILDVVYNASNNELVRTKTLVKGAIISIDAAPLRQWYEQHYGVQIGKKKGKKAA-AEEEAVAKSSHVARKQAQRCKTRTLDPLLDEQFANGRLLASISSRPGQSGRCDGYVLEGKELEFYQKQLAKKK 203          
BLAST of mRNA_E-siliculosus-1a_F_contig1193.1232.1 vs. uniprot
Match: B7FP80_PHATC (40S ribosomal protein S8 n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FP80_PHATC)

HSP 1 Score: 258 bits (659), Expect = 3.650e-85
Identity = 126/177 (71.19%), Postives = 147/177 (83.05%), Query Frame = 0
Query:    1 MGRPAANTKLGHKRVHPVRCRGGNMKYRALRLDSGNFSWGTEVCTRKTRILDVVYNASNNELVRTKTLVKNAIVVVDAHPFKHWYENHYGVTIGLKK--GKKAAPVEEEAVAKSDHVKRKLAKRQADRTLSTLLDEQVASGRFLACISSRPGQSGRCDGYILEGKELEFYQKMLAKK 175
            +GRPAA TK+G  R+HPVRCRGGNMK+RALRLDSGNFSWGTEVCTRK R+LDV YNASNNELVRTKTLVK AIV++DAHPFK+WY++HYGVTIGLKK  G+       +   KS  V++KL  RQA+R+L ++LD Q ASGR LA I+SRPGQ+GRCDGYILEG EL FYQK +AKK
Sbjct:   29 LGRPAAMTKIGEPRIHPVRCRGGNMKFRALRLDSGNFSWGTEVCTRKVRVLDVTYNASNNELVRTKTLVKGAIVLIDAHPFKNWYDSHYGVTIGLKKTGGEDRTQPSVDLTEKSTQVQKKLKSRQANRSLDSVLDHQFASGRLLAKITSRPGQTGRCDGYILEGAELAFYQKQMAKK 205          
BLAST of mRNA_E-siliculosus-1a_F_contig1193.1232.1 vs. uniprot
Match: A0A6U3PIT0_9STRA (40S ribosomal protein S8 n=3 Tax=Lithodesmiaceae TaxID=49247 RepID=A0A6U3PIT0_9STRA)

HSP 1 Score: 256 bits (653), Expect = 2.520e-84
Identity = 128/175 (73.14%), Postives = 144/175 (82.29%), Query Frame = 0
Query:    1 MGRPAANTKLGHKRVHPVRCRGGNMKYRALRLDSGNFSWGTEVCTRKTRILDVVYNASNNELVRTKTLVKNAIVVVDAHPFKHWYENHYGVTIGLKKGKKAAPVEEEAVAKSDHVKRKLAKRQADRTLSTLLDEQVASGRFLACISSRPGQSGRCDGYILEGKELEFYQKMLAKK 175
            MGRPAA TK+G KRVH VR RGGNMK+RALRLDSGNFSWGTEVCTRK R+LDV YNASNNELVRTKTLVK AIV++DAHPFK WYE+HYG+ IG+KKG  A    ++ V KSDHV+RKLA RQ  R L   +D Q+ASGR LA I+SRPGQSGRCDG +LEG EL FYQKM+ KK
Sbjct:   29 MGRPAAMTKIGEKRVHGVRGRGGNMKWRALRLDSGNFSWGTEVCTRKVRVLDVTYNASNNELVRTKTLVKGAIVLIDAHPFKSWYESHYGLKIGVKKGSTAL---DDDVKKSDHVQRKLASRQKGRELEQAIDNQMASGRLLAKITSRPGQSGRCDGIVLEGAELHFYQKMMHKK 200          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1193.1232.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FHG3_ECTSI3.120e-12398.8840S ribosomal protein S8 n=2 Tax=Ectocarpus TaxID=... [more]
A0A836CLT8_9STRA6.550e-9274.3240S ribosomal protein S8 n=1 Tax=Tribonema minus T... [more]
A0A7S2USH6_9STRA8.330e-9075.4240S ribosomal protein S8 n=1 Tax=Fibrocapsa japoni... [more]
A0A812SFI7_SYMMI4.240e-8772.1640S ribosomal protein S8 n=1 Tax=Symbiodinium micr... [more]
A0A7S1Z304_TRICV5.720e-8674.2940S ribosomal protein S8 n=1 Tax=Trieres chinensis... [more]
B8CB96_THAPS7.590e-8674.1440S ribosomal protein S8 n=2 Tax=Ochrophyta TaxID=... [more]
A0A7S2JRG2_9STRA1.110e-8574.8640S ribosomal protein S8 n=1 Tax=Leptocylindrus da... [more]
A0A6V2QD30_HETAK1.270e-8575.0040S ribosomal protein S8 n=2 Tax=Sar TaxID=2698737... [more]
B7FP80_PHATC3.650e-8571.1940S ribosomal protein S8 n=2 Tax=Phaeodactylum tri... [more]
A0A6U3PIT0_9STRA2.520e-8473.1440S ribosomal protein S8 n=3 Tax=Lithodesmiaceae T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.40.10.450coord: 97..177
e-value: 2.8E-18
score: 67.9
NoneNo IPR availableGENE3D2.40.10.450coord: 4..96
e-value: 2.0E-36
score: 126.6
NoneNo IPR availablePANTHERPTHR10394:SF340S RIBOSOMAL PROTEIN S8coord: 1..177
IPR001047Ribosomal protein S8eTIGRFAMTIGR00307TIGR00307coord: 1..162
e-value: 1.8E-34
score: 116.6
IPR001047Ribosomal protein S8ePANTHERPTHR1039440S RIBOSOMAL PROTEIN S8coord: 1..177
IPR022309Ribosomal protein S8e/ribosomal biogenesis NSA2PFAMPF01201Ribosomal_S8ecoord: 1..160
e-value: 9.2E-43
score: 145.7

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1193contigE-siliculosus-1a_F_contig1193:15461..19289 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1193.1232.1mRNA_E-siliculosus-1a_F_contig1193.1232.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1193 15276..19289 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1193.1232.1 ID=prot_E-siliculosus-1a_F_contig1193.1232.1|Name=mRNA_E-siliculosus-1a_F_contig1193.1232.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=179bp
MGRPAANTKLGHKRVHPVRCRGGNMKYRALRLDSGNFSWGTEVCTRKTRI
LDVVYNASNNELVRTKTLVKNAIVVVDAHPFKHWYENHYGVTIGLKKGKK
AAPVEEEAVAKSDHVKRKLAKRQADRTLSTLLDEQVASGRFLACISSRPG
QSGRCDGYILEGKELEFYQKMLAKKKSK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR022309Ribosomal_S8e/biogenesis_NSA2
IPR001047Ribosomal_S8e