prot_E-siliculosus-1a_F_contig11925.1229.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig11925.1229.1
Unique Nameprot_E-siliculosus-1a_F_contig11925.1229.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length54
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig11925.1229.1 vs. uniprot
Match: D7FMM5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMM5_ECTSI)

HSP 1 Score: 97.4 bits (241), Expect = 1.010e-25
Identity = 47/53 (88.68%), Postives = 49/53 (92.45%), Query Frame = 0 
Query:    1 IKLEGDYFLIGLLSSRRKPDPGSLTPLHGSAHLGQRKAVEMLLGAGVDANLKT 53
            +KLEGDYFLIGLLSSRRKPDPGS TPLH SAH GQRKAV +LLGAGVDANLKT
Sbjct:    1 MKLEGDYFLIGLLSSRRKPDPGSFTPLHWSAHFGQRKAVAILLGAGVDANLKT 53
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig11925.1229.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FMM5_ECTSI1.010e-2588.68Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 22..53
score: 10.312
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 22..53
score: 10.339
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 19..51

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig11925contigE-siliculosus-1a_F_contig11925:281..1520 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig11925.1229.1mRNA_E-siliculosus-1a_F_contig11925.1229.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig11925 281..1520 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig11925.1229.1 ID=prot_E-siliculosus-1a_F_contig11925.1229.1|Name=mRNA_E-siliculosus-1a_F_contig11925.1229.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=54bp
IKLEGDYFLIGLLSSRRKPDPGSLTPLHGSAHLGQRKAVEMLLGAGVDAN
LKT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036770Ankyrin_rpt-contain_sf
IPR002110Ankyrin_rpt
IPR020683Ankyrin_rpt-contain_dom