prot_E-siliculosus-1a_F_contig119.1216.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig119.1216.1
Unique Nameprot_E-siliculosus-1a_F_contig119.1216.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length102
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig119.1216.1 vs. uniprot
Match: D7FYT5_ECTSI (40S ribosomal protein S17 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYT5_ECTSI)

HSP 1 Score: 193 bits (491), Expect = 4.500e-62
Identity = 101/101 (100.00%), Postives = 101/101 (100.00%), Query Frame = 0
Query:    1 MDFHTNKRVCDEVAIIPSKRMRNKIAGFVTHLMKRIQRGPVRGISLKLQEEERERRMDFVPEVSAIEQESIDIDPDTKDLLDALDFKDLAGIAVSAVPPRV 101
            MDFHTNKRVCDEVAIIPSKRMRNKIAGFVTHLMKRIQRGPVRGISLKLQEEERERRMDFVPEVSAIEQESIDIDPDTKDLLDALDFKDLAGIAVSAVPPRV
Sbjct:   25 MDFHTNKRVCDEVAIIPSKRMRNKIAGFVTHLMKRIQRGPVRGISLKLQEEERERRMDFVPEVSAIEQESIDIDPDTKDLLDALDFKDLAGIAVSAVPPRV 125          
BLAST of mRNA_E-siliculosus-1a_F_contig119.1216.1 vs. uniprot
Match: F0Y4Q4_AURAN (Uncharacterized protein n=2 Tax=Pelagomonadales TaxID=54409 RepID=F0Y4Q4_AURAN)

HSP 1 Score: 166 bits (420), Expect = 2.720e-51
Identity = 83/95 (87.37%), Postives = 92/95 (96.84%), Query Frame = 0
Query:    1 MDFHTNKRVCDEVAIIPSKRMRNKIAGFVTHLMKRIQRGPVRGISLKLQEEERERRMDFVPEVSAIEQESIDIDPDTKDLLDALDFKDLAGIAVS 95
            +DFHTNKRVCDEVA++PSKRMRNKIAGFVTHLMKRIQRGPVRGISLKLQEEERERRMDFVPEVSAI+Q+ ++IDPDTK++LDALDFKDL GI VS
Sbjct:   25 VDFHTNKRVCDEVAVVPSKRMRNKIAGFVTHLMKRIQRGPVRGISLKLQEEERERRMDFVPEVSAIDQDFVEIDPDTKEMLDALDFKDLPGIQVS 119          
BLAST of mRNA_E-siliculosus-1a_F_contig119.1216.1 vs. uniprot
Match: A0A836CIS9_9STRA (40S ribosomal protein S17 n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIS9_9STRA)

HSP 1 Score: 166 bits (419), Expect = 4.120e-51
Identity = 84/96 (87.50%), Postives = 92/96 (95.83%), Query Frame = 0
Query:    1 MDFHTNKRVCDEVAIIPSKRMRNKIAGFVTHLMKRIQRGPVRGISLKLQEEERERRMDFVPEVSAIEQESIDIDPDTKDLLDALDFKDLAGIAVSA 96
            +DFHTNKRVCDEVAIIPSKRMRNKIAGFVTHLMKRIQRGPVRGISLKLQEEERERR+DFVPEVSAIEQE I+IDPDTK+LLDALDFKD+  +++ A
Sbjct:   25 LDFHTNKRVCDEVAIIPSKRMRNKIAGFVTHLMKRIQRGPVRGISLKLQEEERERRLDFVPEVSAIEQERIEIDPDTKELLDALDFKDIPNLSIVA 120          
BLAST of mRNA_E-siliculosus-1a_F_contig119.1216.1 vs. uniprot
Match: A0A7S4SMK2_9DINO (Hypothetical protein (Fragment) n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4SMK2_9DINO)

HSP 1 Score: 164 bits (416), Expect = 1.430e-50
Identity = 83/96 (86.46%), Postives = 91/96 (94.79%), Query Frame = 0
Query:    1 MDFHTNKRVCDEVAIIPSKRMRNKIAGFVTHLMKRIQRGPVRGISLKLQEEERERRMDFVPEVSAIEQESIDIDPDTKDLLDALDFKDLAGIAVSA 96
            +DFHTNKRVCDEVAIIPSKRMRNKIAGF+THLMKRIQRGPVRGISLKLQEEERERRMDFVPEVSA++QE I++DP TK +LDALDFKDL G+ VSA
Sbjct:   35 LDFHTNKRVCDEVAIIPSKRMRNKIAGFITHLMKRIQRGPVRGISLKLQEEERERRMDFVPEVSALDQEVIEVDPQTKAMLDALDFKDLPGVQVSA 130          
BLAST of mRNA_E-siliculosus-1a_F_contig119.1216.1 vs. uniprot
Match: A0A1E7EU86_9STRA (Ribosomal protein S17 component of cytosolic 80S ribosome and 40S small subunit n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EU86_9STRA)

HSP 1 Score: 148 bits (373), Expect = 4.330e-44
Identity = 73/100 (73.00%), Postives = 90/100 (90.00%), Query Frame = 0
Query:    1 MDFHTNKRVCDEVAIIPSKRMRNKIAGFVTHLMKRIQRGPVRGISLKLQEEERERRMDFVPEVSAIEQESIDIDPDTKDLLDALDFKDLAGIAVSAVPPR 100
            +DFHTNKR+ DEVAI+PSKRMRNKIAG+ THLM+RI +GPVRGISLKLQEEERERR+DFVPEVSA+EQ++I IDPDT+D+L++L F  L G+AV++ P R
Sbjct:   25 LDFHTNKRIVDEVAILPSKRMRNKIAGYTTHLMRRIAKGPVRGISLKLQEEERERRLDFVPEVSALEQDTITIDPDTRDMLESLGFGSLNGVAVNSGPHR 124          
BLAST of mRNA_E-siliculosus-1a_F_contig119.1216.1 vs. uniprot
Match: Q8ISP1_BRABE (40S ribosomal protein S17 n=4 Tax=Branchiostoma TaxID=7737 RepID=Q8ISP1_BRABE)

HSP 1 Score: 146 bits (368), Expect = 3.300e-43
Identity = 69/95 (72.63%), Postives = 90/95 (94.74%), Query Frame = 0
Query:    1 MDFHTNKRVCDEVAIIPSKRMRNKIAGFVTHLMKRIQRGPVRGISLKLQEEERERRMDFVPEVSAIEQESIDIDPDTKDLLDALDFKDLAGIAVS 95
            +DFHTNKR+C+E+AIIPSK++RNK+AGFVTHLMKRIQRGPVRGIS+KLQEEERERR ++VPEVSAI+Q+ I++DPDTK++L ALDF +++G+ V+
Sbjct:   26 LDFHTNKRICEEIAIIPSKKLRNKVAGFVTHLMKRIQRGPVRGISIKLQEEERERRDNYVPEVSAIDQDIIEVDPDTKEMLKALDFGNISGLQVT 120          
BLAST of mRNA_E-siliculosus-1a_F_contig119.1216.1 vs. uniprot
Match: A0A7S0LDM9_9EUKA (Hypothetical protein n=2 Tax=Eukaryota TaxID=2759 RepID=A0A7S0LDM9_9EUKA)

HSP 1 Score: 145 bits (365), Expect = 6.730e-43
Identity = 74/95 (77.89%), Postives = 87/95 (91.58%), Query Frame = 0
Query:    1 MDFHTNKRVCDEVAIIPSKRMRNKIAGFVTHLMKRIQRGPVRGISLKLQEEERERRMDFVPEVSAIEQESIDIDPDTKDLLDALDFKDLAGIAVS 95
            +DFHTNKRV  EVAIIPSKRMRNKIAGF+THLMKRIQRGPVRGISLKLQEEERE R+DFVPE SAIEQ+ I ID DTKD+L++++FKD++G+ V+
Sbjct:   25 LDFHTNKRVTAEVAIIPSKRMRNKIAGFITHLMKRIQRGPVRGISLKLQEEEREARLDFVPERSAIEQDVIVIDQDTKDMLESINFKDMSGVQVA 119          
BLAST of mRNA_E-siliculosus-1a_F_contig119.1216.1 vs. uniprot
Match: A0A7S2YDZ4_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YDZ4_9STRA)

HSP 1 Score: 145 bits (365), Expect = 6.940e-43
Identity = 71/94 (75.53%), Postives = 87/94 (92.55%), Query Frame = 0
Query:    1 MDFHTNKRVCDEVAIIPSKRMRNKIAGFVTHLMKRIQRGPVRGISLKLQEEERERRMDFVPEVSAIEQESIDIDPDTKDLLDALDFKDLAGIAV 94
            +DFHTNKR+ D+VAI+PSKR+RNKIAG+ THLM+RI +GPVRGISLKLQEEERERR+DFVPEVSA+EQE+I IDPDT+D+L++L F  LAG+AV
Sbjct:   25 LDFHTNKRLIDDVAILPSKRIRNKIAGYTTHLMRRIAKGPVRGISLKLQEEERERRLDFVPEVSALEQETIQIDPDTRDMLESLGFNGLAGVAV 118          
BLAST of mRNA_E-siliculosus-1a_F_contig119.1216.1 vs. uniprot
Match: B7FVN4_PHATC (Predicted protein n=9 Tax=Bacillariophyta TaxID=2836 RepID=B7FVN4_PHATC)

HSP 1 Score: 144 bits (364), Expect = 1.020e-42
Identity = 72/100 (72.00%), Postives = 88/100 (88.00%), Query Frame = 0
Query:    1 MDFHTNKRVCDEVAIIPSKRMRNKIAGFVTHLMKRIQRGPVRGISLKLQEEERERRMDFVPEVSAIEQESIDIDPDTKDLLDALDFKDLAGIAVSAVPPR 100
            +DFHTNKR+ D+VAI+PSKRMRNKIAG+ THLM+RI +GPVRGISLKLQEEERERR+DFVPEVSA+EQE+I IDPDT+DLL++L +  L G+AV+    R
Sbjct:   25 VDFHTNKRIIDDVAILPSKRMRNKIAGYTTHLMRRIAKGPVRGISLKLQEEERERRLDFVPEVSALEQETIQIDPDTRDLLESLGYGKLNGVAVNQAHTR 124          
BLAST of mRNA_E-siliculosus-1a_F_contig119.1216.1 vs. uniprot
Match: A0A7J7IQE7_9RHOD (40S ribosomal protein S17 n=2 Tax=Cyanidiaceae TaxID=265316 RepID=A0A7J7IQE7_9RHOD)

HSP 1 Score: 144 bits (363), Expect = 1.840e-42
Identity = 71/93 (76.34%), Postives = 83/93 (89.25%), Query Frame = 0
Query:    2 DFHTNKRVCDEVAIIPSKRMRNKIAGFVTHLMKRIQRGPVRGISLKLQEEERERRMDFVPEVSAIEQESIDIDPDTKDLLDALDFKDLAGIAV 94
            DFHTNKRVCDEVAI+PSKRMRNK+AGF+THLMKRIQRGPVRGISLKLQEEERERRMDFVP+VSA+  E+I++DPDTK +L ++    L G+ V
Sbjct:   28 DFHTNKRVCDEVAILPSKRMRNKVAGFITHLMKRIQRGPVRGISLKLQEEERERRMDFVPDVSAVNTENIEVDPDTKAMLRSIGLGSLPGVIV 120          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig119.1216.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FYT5_ECTSI4.500e-62100.0040S ribosomal protein S17 n=2 Tax=Ectocarpus TaxID... [more]
F0Y4Q4_AURAN2.720e-5187.37Uncharacterized protein n=2 Tax=Pelagomonadales Ta... [more]
A0A836CIS9_9STRA4.120e-5187.5040S ribosomal protein S17 n=2 Tax=Tribonema minus ... [more]
A0A7S4SMK2_9DINO1.430e-5086.46Hypothetical protein (Fragment) n=1 Tax=Alexandriu... [more]
A0A1E7EU86_9STRA4.330e-4473.00Ribosomal protein S17 component of cytosolic 80S r... [more]
Q8ISP1_BRABE3.300e-4372.6340S ribosomal protein S17 n=4 Tax=Branchiostoma Ta... [more]
A0A7S0LDM9_9EUKA6.730e-4377.89Hypothetical protein n=2 Tax=Eukaryota TaxID=2759 ... [more]
A0A7S2YDZ4_9STRA6.940e-4375.53Hypothetical protein n=1 Tax=Amphiprora paludosa T... [more]
B7FVN4_PHATC1.020e-4272.00Predicted protein n=9 Tax=Bacillariophyta TaxID=28... [more]
A0A7J7IQE7_9RHOD1.840e-4276.3440S ribosomal protein S17 n=2 Tax=Cyanidiaceae Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001210Ribosomal protein S17ePFAMPF00833Ribosomal_S17ecoord: 2..94
e-value: 1.2E-47
score: 160.8
IPR001210Ribosomal protein S17ePANTHERPTHR1073240S RIBOSOMAL PROTEIN S17coord: 2..93
IPR036401Ribosomal protein S17e-like superfamilyGENE3D1.10.60.20coord: 1..37
e-value: 2.5E-20
score: 73.9
IPR036401Ribosomal protein S17e-like superfamilySUPERFAMILY116820Rps17e-likecoord: 2..37
IPR018273Ribosomal protein S17e, conserved sitePROSITEPS00712RIBOSOMAL_S17Ecoord: 16..31

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig119contigE-siliculosus-1a_F_contig119:75050..77256 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig119.1216.1mRNA_E-siliculosus-1a_F_contig119.1216.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig119 74470..77467 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig119.1216.1 ID=prot_E-siliculosus-1a_F_contig119.1216.1|Name=mRNA_E-siliculosus-1a_F_contig119.1216.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=102bp
MDFHTNKRVCDEVAIIPSKRMRNKIAGFVTHLMKRIQRGPVRGISLKLQE
EERERRMDFVPEVSAIEQESIDIDPDTKDLLDALDFKDLAGIAVSAVPPR
V*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018273Ribosomal_S17e_CS
IPR036401RPS17e-like_sf
IPR001210Ribosomal_S17e