mRNA_E-siliculosus-1a_F_contig119.1216.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig119.1216.1
Unique NamemRNA_E-siliculosus-1a_F_contig119.1216.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig119.1216.1 vs. uniprot
Match: D7FYT5_ECTSI (40S ribosomal protein S17 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYT5_ECTSI)

HSP 1 Score: 235 bits (599), Expect = 2.400e-74
Identity = 124/124 (100.00%), Postives = 124/124 (100.00%), Query Frame = 2 
Query:  143 GVRTKTVKKSARAIIEKYYSRLTMDFHTNKRVCDEVAIIPSKRMRNKIAGFVTHLMKRIQRGPVRGISLKLQEEERERRMDFVPEVSAIEQESIDIDPDTKDLLDALDFKDLAGIAVSAVPPRV 514
            GVRTKTVKKSARAIIEKYYSRLTMDFHTNKRVCDEVAIIPSKRMRNKIAGFVTHLMKRIQRGPVRGISLKLQEEERERRMDFVPEVSAIEQESIDIDPDTKDLLDALDFKDLAGIAVSAVPPRV
Sbjct:    2 GVRTKTVKKSARAIIEKYYSRLTMDFHTNKRVCDEVAIIPSKRMRNKIAGFVTHLMKRIQRGPVRGISLKLQEEERERRMDFVPEVSAIEQESIDIDPDTKDLLDALDFKDLAGIAVSAVPPRV 125
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig119.1216.1 vs. uniprot
Match: A0A836CIS9_9STRA (40S ribosomal protein S17 n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIS9_9STRA)

HSP 1 Score: 206 bits (523), Expect = 6.740e-63
Identity = 106/119 (89.08%), Postives = 114/119 (95.80%), Query Frame = 2 
Query:  143 GVRTKTVKKSARAIIEKYYSRLTMDFHTNKRVCDEVAIIPSKRMRNKIAGFVTHLMKRIQRGPVRGISLKLQEEERERRMDFVPEVSAIEQESIDIDPDTKDLLDALDFKDLAGIAVSA 499
            GVRTKTVKKSAR IIEKYYSRLT+DFHTNKRVCDEVAIIPSKRMRNKIAGFVTHLMKRIQRGPVRGISLKLQEEERERR+DFVPEVSAIEQE I+IDPDTK+LLDALDFKD+  +++ A
Sbjct:    2 GVRTKTVKKSARVIIEKYYSRLTLDFHTNKRVCDEVAIIPSKRMRNKIAGFVTHLMKRIQRGPVRGISLKLQEEERERRLDFVPEVSAIEQERIEIDPDTKELLDALDFKDIPNLSIVA 120
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig119.1216.1 vs. uniprot
Match: A0A7S4SMK2_9DINO (Hypothetical protein (Fragment) n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4SMK2_9DINO)

HSP 1 Score: 204 bits (520), Expect = 2.320e-62
Identity = 105/119 (88.24%), Postives = 113/119 (94.96%), Query Frame = 2 
Query:  143 GVRTKTVKKSARAIIEKYYSRLTMDFHTNKRVCDEVAIIPSKRMRNKIAGFVTHLMKRIQRGPVRGISLKLQEEERERRMDFVPEVSAIEQESIDIDPDTKDLLDALDFKDLAGIAVSA 499
            GVRTKTVKKSAR IIEKYYSRLT+DFHTNKRVCDEVAIIPSKRMRNKIAGF+THLMKRIQRGPVRGISLKLQEEERERRMDFVPEVSA++QE I++DP TK +LDALDFKDL G+ VSA
Sbjct:   12 GVRTKTVKKSARTIIEKYYSRLTLDFHTNKRVCDEVAIIPSKRMRNKIAGFITHLMKRIQRGPVRGISLKLQEEERERRMDFVPEVSALDQEVIEVDPQTKAMLDALDFKDLPGVQVSA 130
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BLAST of mRNA_E-siliculosus-1a_F_contig119.1216.1 vs. uniprot
Match: F0Y4Q4_AURAN (Uncharacterized protein n=2 Tax=Pelagomonadales TaxID=54409 RepID=F0Y4Q4_AURAN)

HSP 1 Score: 201 bits (512), Expect = 2.860e-61
Identity = 102/118 (86.44%), Postives = 113/118 (95.76%), Query Frame = 2 
Query:  143 GVRTKTVKKSARAIIEKYYSRLTMDFHTNKRVCDEVAIIPSKRMRNKIAGFVTHLMKRIQRGPVRGISLKLQEEERERRMDFVPEVSAIEQESIDIDPDTKDLLDALDFKDLAGIAVS 496
            GVRTKTVK+SAR I+EKYYSRL +DFHTNKRVCDEVA++PSKRMRNKIAGFVTHLMKRIQRGPVRGISLKLQEEERERRMDFVPEVSAI+Q+ ++IDPDTK++LDALDFKDL GI VS
Sbjct:    2 GVRTKTVKRSARLIVEKYYSRLGVDFHTNKRVCDEVAVVPSKRMRNKIAGFVTHLMKRIQRGPVRGISLKLQEEERERRMDFVPEVSAIDQDFVEIDPDTKEMLDALDFKDLPGIQVS 119
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig119.1216.1 vs. uniprot
Match: A0A7S0LDM9_9EUKA (Hypothetical protein n=2 Tax=Eukaryota TaxID=2759 RepID=A0A7S0LDM9_9EUKA)

HSP 1 Score: 184 bits (466), Expect = 2.410e-54
Identity = 95/118 (80.51%), Postives = 109/118 (92.37%), Query Frame = 2 
Query:  143 GVRTKTVKKSARAIIEKYYSRLTMDFHTNKRVCDEVAIIPSKRMRNKIAGFVTHLMKRIQRGPVRGISLKLQEEERERRMDFVPEVSAIEQESIDIDPDTKDLLDALDFKDLAGIAVS 496
            GVRTKTVKKSAR IIEKYYS+LT+DFHTNKRV  EVAIIPSKRMRNKIAGF+THLMKRIQRGPVRGISLKLQEEERE R+DFVPE SAIEQ+ I ID DTKD+L++++FKD++G+ V+
Sbjct:    2 GVRTKTVKKSARVIIEKYYSKLTLDFHTNKRVTAEVAIIPSKRMRNKIAGFITHLMKRIQRGPVRGISLKLQEEEREARLDFVPERSAIEQDVIVIDQDTKDMLESINFKDMSGVQVA 119
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig119.1216.1 vs. uniprot
Match: A0A1E7EU86_9STRA (Ribosomal protein S17 component of cytosolic 80S ribosome and 40S small subunit n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EU86_9STRA)

HSP 1 Score: 184 bits (466), Expect = 2.570e-54
Identity = 92/123 (74.80%), Postives = 110/123 (89.43%), Query Frame = 2 
Query:  143 GVRTKTVKKSARAIIEKYYSRLTMDFHTNKRVCDEVAIIPSKRMRNKIAGFVTHLMKRIQRGPVRGISLKLQEEERERRMDFVPEVSAIEQESIDIDPDTKDLLDALDFKDLAGIAVSAVPPR 511
            GVRTKTVKKSAR I+E YY RLT+DFHTNKR+ DEVAI+PSKRMRNKIAG+ THLM+RI +GPVRGISLKLQEEERERR+DFVPEVSA+EQ++I IDPDT+D+L++L F  L G+AV++ P R
Sbjct:    2 GVRTKTVKKSARTIVENYYPRLTLDFHTNKRIVDEVAILPSKRMRNKIAGYTTHLMRRIAKGPVRGISLKLQEEERERRLDFVPEVSALEQDTITIDPDTRDMLESLGFGSLNGVAVNSGPHR 124
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig119.1216.1 vs. uniprot
Match: A0A7S2YDZ4_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YDZ4_9STRA)

HSP 1 Score: 183 bits (464), Expect = 4.960e-54
Identity = 90/117 (76.92%), Postives = 109/117 (93.16%), Query Frame = 2 
Query:  143 GVRTKTVKKSARAIIEKYYSRLTMDFHTNKRVCDEVAIIPSKRMRNKIAGFVTHLMKRIQRGPVRGISLKLQEEERERRMDFVPEVSAIEQESIDIDPDTKDLLDALDFKDLAGIAV 493
            GVRTKT+KKSAR I+EKYY+RLT+DFHTNKR+ D+VAI+PSKR+RNKIAG+ THLM+RI +GPVRGISLKLQEEERERR+DFVPEVSA+EQE+I IDPDT+D+L++L F  LAG+AV
Sbjct:    2 GVRTKTIKKSARTIVEKYYTRLTLDFHTNKRLIDDVAILPSKRIRNKIAGYTTHLMRRIAKGPVRGISLKLQEEERERRLDFVPEVSALEQETIQIDPDTRDMLESLGFNGLAGVAV 118
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BLAST of mRNA_E-siliculosus-1a_F_contig119.1216.1 vs. uniprot
Match: B7FVN4_PHATC (Predicted protein n=9 Tax=Bacillariophyta TaxID=2836 RepID=B7FVN4_PHATC)

HSP 1 Score: 182 bits (462), Expect = 1.020e-53
Identity = 92/123 (74.80%), Postives = 109/123 (88.62%), Query Frame = 2 
Query:  143 GVRTKTVKKSARAIIEKYYSRLTMDFHTNKRVCDEVAIIPSKRMRNKIAGFVTHLMKRIQRGPVRGISLKLQEEERERRMDFVPEVSAIEQESIDIDPDTKDLLDALDFKDLAGIAVSAVPPR 511
            GVRTKTVKKSAR I+EKYY RLT+DFHTNKR+ D+VAI+PSKRMRNKIAG+ THLM+RI +GPVRGISLKLQEEERERR+DFVPEVSA+EQE+I IDPDT+DLL++L +  L G+AV+    R
Sbjct:    2 GVRTKTVKKSARTIVEKYYPRLTVDFHTNKRIIDDVAILPSKRMRNKIAGYTTHLMRRIAKGPVRGISLKLQEEERERRLDFVPEVSALEQETIQIDPDTRDLLESLGYGKLNGVAVNQAHTR 124
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig119.1216.1 vs. uniprot
Match: Q8ISP1_BRABE (40S ribosomal protein S17 n=4 Tax=Branchiostoma TaxID=7737 RepID=Q8ISP1_BRABE)

HSP 1 Score: 181 bits (459), Expect = 3.840e-53
Identity = 87/117 (74.36%), Postives = 111/117 (94.87%), Query Frame = 2 
Query:  146 VRTKTVKKSARAIIEKYYSRLTMDFHTNKRVCDEVAIIPSKRMRNKIAGFVTHLMKRIQRGPVRGISLKLQEEERERRMDFVPEVSAIEQESIDIDPDTKDLLDALDFKDLAGIAVS 496
            VRTKT+KK+AR IIEKYY+RLT+DFHTNKR+C+E+AIIPSK++RNK+AGFVTHLMKRIQRGPVRGIS+KLQEEERERR ++VPEVSAI+Q+ I++DPDTK++L ALDF +++G+ V+
Sbjct:    4 VRTKTIKKAARVIIEKYYTRLTLDFHTNKRICEEIAIIPSKKLRNKVAGFVTHLMKRIQRGPVRGISIKLQEEERERRDNYVPEVSAIDQDIIEVDPDTKEMLKALDFGNISGLQVT 120
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig119.1216.1 vs. uniprot
Match: A0A7I8VIK1_9ANNE (40S ribosomal protein S17 n=1 Tax=Dimorphilus gyrociliatus TaxID=2664684 RepID=A0A7I8VIK1_9ANNE)

HSP 1 Score: 179 bits (455), Expect = 1.680e-52
Identity = 92/116 (79.31%), Postives = 106/116 (91.38%), Query Frame = 2 
Query:  146 VRTKTVKKSARAIIEKYYSRLTMDFHTNKRVCDEVAIIPSKRMRNKIAGFVTHLMKRIQRGPVRGISLKLQEEERERRMDFVPEVSAIEQESIDIDPDTKDLLDALDFKDLAGIAV 493
            VRTKTVKK+AR IIEKYY+RLT+DFHTNKR+C+E+AIIPSKR+RNKIAGFVTHLMKRIQRGPVRGIS+KLQEEERERR ++VPEVSAIEQ+ IDIDPDTK++L  LD  +L  I V
Sbjct:    4 VRTKTVKKAARVIIEKYYTRLTLDFHTNKRICEEIAIIPSKRLRNKIAGFVTHLMKRIQRGPVRGISIKLQEEERERRDNYVPEVSAIEQDVIDIDPDTKEMLKMLDMANLPRIQV 119
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig119.1216.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FYT5_ECTSI2.400e-74100.0040S ribosomal protein S17 n=2 Tax=Ectocarpus TaxID... [more]
A0A836CIS9_9STRA6.740e-6389.0840S ribosomal protein S17 n=2 Tax=Tribonema minus ... [more]
A0A7S4SMK2_9DINO2.320e-6288.24Hypothetical protein (Fragment) n=1 Tax=Alexandriu... [more]
F0Y4Q4_AURAN2.860e-6186.44Uncharacterized protein n=2 Tax=Pelagomonadales Ta... [more]
A0A7S0LDM9_9EUKA2.410e-5480.51Hypothetical protein n=2 Tax=Eukaryota TaxID=2759 ... [more]
A0A1E7EU86_9STRA2.570e-5474.80Ribosomal protein S17 component of cytosolic 80S r... [more]
A0A7S2YDZ4_9STRA4.960e-5476.92Hypothetical protein n=1 Tax=Amphiprora paludosa T... [more]
B7FVN4_PHATC1.020e-5374.80Predicted protein n=9 Tax=Bacillariophyta TaxID=28... [more]
Q8ISP1_BRABE3.840e-5374.3640S ribosomal protein S17 n=4 Tax=Branchiostoma Ta... [more]
A0A7I8VIK1_9ANNE1.680e-5279.3140S ribosomal protein S17 n=1 Tax=Dimorphilus gyro... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig119contigE-siliculosus-1a_F_contig119:74470..77467 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start1
Stop1
Cds size306
Model size1097
Exons2
Ec32 orthologEc-19_002440.1
Ec32 ortholog description40S ribosomal protein S17
Hectar predicted targeting categoryother localisation
BRITEbr01610,ko00000,ko00001,ko00002,ko01000,ko03009,ko03011,ko03036,ko03041,ko04030
Best eggNOG OGNA|NA|NA
Best tax levelEukaryota
COG Functional cat.J
EC3.6.4.13
EggNOG OGsCOG1383@1,KOG0187@2759
EggNOG free text desc.ribosomal small subunit assembly
GOsGO:0000028,GO:0000184,GO:0000956,GO:0002181,GO:0002182,GO:0002262,GO:0002376,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005730,GO:0005737,GO:0005783,GO:0005789,GO:0005791,GO:0005829,GO:0005840,GO:0005886,GO:0006139,GO:0006364,GO:0006396,GO:0006401,GO:0006402,GO:0006412,GO:0006413,GO:0006414,GO:0006518,GO:0006605,GO:0006612,GO:0006613,GO:0006614,GO:0006725,GO:0006807,GO:0006810,GO:0006886,GO:0006996,GO:0008104,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010605,GO:0010629,GO:0012505,GO:0015031,GO:0015833,GO:0015935,GO:0016020,GO:0016043,GO:0016070,GO:0016071,GO:0016072,GO:0019222,GO:0019439,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0030867,GO:0031090,GO:0031974,GO:0031981,GO:0031984,GO:0032991,GO:0033036,GO:0033365,GO:0034101,GO:0034470,GO:0034613,GO:0034622,GO:0034641,GO:0034645,GO:0034655,GO:0034660,GO:0042175,GO:0042254,GO:0042255,GO:0042274,GO:0042592,GO:0042886,GO:0043043,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044267,GO:0044270,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044432,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0045047,GO:0045184,GO:0046483,GO:0046700,GO:0046907,GO:0048519,GO:0048872,GO:0050789,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0060255,GO:0065003,GO:0065007,GO:0065008,GO:0070013,GO:0070727,GO:0070925,GO:0070972,GO:0071702,GO:0071704,GO:0071705,GO:0071826,GO:0071840,GO:0071944,GO:0072594,GO:0072599,GO:0072657,GO:0090150,GO:0090304,GO:0097159,GO:0098552,GO:0098554,GO:0098556,GO:0098562,GO:0098588,GO:0098827,GO:1901360,GO:1901361,GO:1901363,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1990904
KEGG ModuleM00177,M00179
KEGG Pathwayko03010,ko04111,map03010,map04111
KEGG koko:K02962,ko:K04324,ko:K06674,ko:K14807,ko:K20099
Preferred nameRPS17
Seed eggNOG ortholog2880.D7FYT5
Seed ortholog evalue1.1e-47
Seed ortholog score195.7
Taxonomic scopeEukaryota
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig119.1216.1prot_E-siliculosus-1a_F_contig119.1216.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig119 75050..77256 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927708.4038248-UTR-E-siliculosus-1a_F_contig119:74469..750491622927708.4038248-UTR-E-siliculosus-1a_F_contig119:74469..75049Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig119 74470..75049 -
1696318648.1445491-UTR-E-siliculosus-1a_F_contig119:74469..750491696318648.1445491-UTR-E-siliculosus-1a_F_contig119:74469..75049Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig119 74470..75049 -
1622927708.4407716-UTR-E-siliculosus-1a_F_contig119:77256..774671622927708.4407716-UTR-E-siliculosus-1a_F_contig119:77256..77467Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig119 77257..77467 -
1696318648.1762488-UTR-E-siliculosus-1a_F_contig119:77256..774671696318648.1762488-UTR-E-siliculosus-1a_F_contig119:77256..77467Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig119 77257..77467 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927708.4168668-CDS-E-siliculosus-1a_F_contig119:75049..751691622927708.4168668-CDS-E-siliculosus-1a_F_contig119:75049..75169Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig119 75050..75169 -
1696318648.157454-CDS-E-siliculosus-1a_F_contig119:75049..751691696318648.157454-CDS-E-siliculosus-1a_F_contig119:75049..75169Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig119 75050..75169 -
1622927708.4286542-CDS-E-siliculosus-1a_F_contig119:77070..772561622927708.4286542-CDS-E-siliculosus-1a_F_contig119:77070..77256Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig119 77071..77256 -
1696318648.1667051-CDS-E-siliculosus-1a_F_contig119:77070..772561696318648.1667051-CDS-E-siliculosus-1a_F_contig119:77070..77256Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig119 77071..77256 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig119.1216.1

>prot_E-siliculosus-1a_F_contig119.1216.1 ID=prot_E-siliculosus-1a_F_contig119.1216.1|Name=mRNA_E-siliculosus-1a_F_contig119.1216.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=102bp
MDFHTNKRVCDEVAIIPSKRMRNKIAGFVTHLMKRIQRGPVRGISLKLQE
EERERRMDFVPEVSAIEQESIDIDPDTKDLLDALDFKDLAGIAVSAVPPR
V*
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mRNA from alignment at E-siliculosus-1a_F_contig119:74470..77467-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig119.1216.1 ID=mRNA_E-siliculosus-1a_F_contig119.1216.1|Name=mRNA_E-siliculosus-1a_F_contig119.1216.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=2998bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig119:74470..77467- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
CGAACGCTCACCTCCACCACTACGCGTCCACCACAAACCAGTCGAGGCTG
TGCCGCTCTTTGCGGCTCCGTGATGCCCATGCCAAACTCCATCTGCAGCT
GGCATTCTGTCTGAGCGATGTGTTTCTACGGCACTCGCGCAGGGTGTCCG
CACGAAGACCGTCAAGAAGTCGGCGCGAGCCATCATCGAGAAGTACTACT
CTCGTCTGACGATGGACTTCCACACAAACAAGCGCGTTTGCGACGAGGTG
GCGATCATCCCGTCCAAGCGGATGCGGAACAAGATCGCCGGCTTTGTGAC
CCACCTCATGAAGCGTATCCAGAGGGGGCCTGTGAGAGGTATTTCGCTGA
AGCTGCAGGAGGAGGAGCGTGAGAGGCGTATGGACTTCGTGCCCGAGGTA
TGACATGGCAACGTAAAATACCAGAAAAAGTGTTACAAATGCTATCTCGG
TCCATCGACTGAGACCCGTGTCCATACAAAAAGTGTGCTACCCACGTTGA
AAGGGATGTAAATATAGGTAGCGGTAGTACAGTTTCTTCCCGAACGGGGT
TAACCGCCAGGTGTTCCCCTTCTATTGCTTCTTCGTTGGGGAAATAGGAA
ATAGATTGTCACCAAGCCAACTCGGTTGGTACAAAATTATTGCTAAATAT
TGCGGTTACCATCCCTGGCACACCTGGTTGCGTTTAGGCCAAGAGACGAG
ACAGCGGGCTGTCCTGCTCGGCGCTTCCGCTGCCGTCCTACATTTCTTTC
TCGATCGTATATAACAAGTGCTGAATGTTTTTGGCGCGGACGTGTTCGAA
CAGCAAAAACGTCGACGGGAAGTTGTCGGGCATGCCAGGAGTAGGAGCCG
CGTCAACTCCAACAGCACATCCGCAATCTTACGCTTCTAGTCCATCTCAG
CCAGAGTACACACACTAGATGCCAAAGTTTGCATGCTACAAGCCAACCGC
TCATCCAATAGAGTAAGGATTGCGATATGCATGAGTTGCACATTACCAAT
CACTCTAACGCCTGGCGTTGAAAGAAGCTAGCTGTAGACTTTTGTTATTG
AAACACGTGCCGCTTCTAAATTGCCGGCAAAGATGGCGTTGGAATGCCCA
CACCAAGTTAGGTTTGGAAGGACGTCGTTGTTACATATTGACGACGTCGT
GTCGAAAGGTCAGCCGCGCGTCCAACAACGATTGTGATAGCCCGTTAGAT
TTGGGTGCCTCAAGTCCACCGCATACTCCGTGAGGTTCATTTTGCAACAT
GTGGCCAAGATGCACCGTCACGTGGATTCCACAAGACTACCAAGTAGCCG
AATATTCCACCGCCTTCTGACCAGTTATGGCGGACATGAAAAGCTTTCTC
GATGAACTCGCGGTAAATGTGAACGGGACCAGGCGTACGAAGAACATGTT
TTCTGTCACTTCGGATAACGGTGGTGCTGCGCTTGTTGCGTCTAACTAGC
CAATTTCACGACGCAAACCAAGTTCATGGTGTTGCCTGCCGTCAATGGCC
TGTATTCTTCACCCAACCGGACTCCCAAAGCTCTTCGGACCACCTCGTTT
GCGGGAAGCATGCAACGTGCGGCAAGAATCGAGTTGCTCATTCTATGCTT
GATACTTTTCGGGCCAACCACGATTTGATCGAGCAAGGCCTTCCGCGTCT
CTCGTGGTTGGCACGAAATGCGGCGGAAACGTTTCGTCTCGGTTTCTGTA
CAGTATTCCTCTGTTGACCCTTGACCTTTGACGATGATGGATGTGGAAGC
AGGCTGCAGACAACTGGAGGCATGTATAGCGCATATAGAGGATAACGGTG
AACTCAACGAGCCCATTTTTGAAGTGAGGGGGGTTTCGTAACTGCCCCCC
GGGTTGCTAAACCCGGGTTGCACATTGGTGCAGCAAGGTGCTATTGCAGG
GAATTGTCCGCAAATGCAAATTCGTTATGATTTCAGTGCTGTATGCTGGT
TATGGCTTGTTGCCAGGTGGCTGGGGTTGAAATTGTTTGACAGTGCACGT
GAAGCTCCGGTGTGCTTGATTCTCCTGCTTCCGACAGTTGATCACGGCCC
TTAGCTACACTTCAATCTGACCGAATGGTCCGTCCACTCAGTACAGCCCA
AGAATATGGCGATGTTCAAGTAGTATGTACGGTGGTTGACGCGGCAACAG
CTCCTTGTTGAAAATCTCTTGCGCGCATTCTGGGCCGGCAGTGTAGTTTC
TAAAAATAGATGATACACGTTCAAATTCGGAACGAGTTCCAGGACTAAGG
GGTTTTCGCCGCCGGTTTCCCTTCTCTCTGCCATGACTCGATTACCAGGT
CTCGGCCATCGAGCAGGAGTCCATCGACATCGACCCGGACACGAAGGACC
TGCTGGACGCGCTTGACTTCAAGGACTTGGCGGGCATCGCTGTATCCGCT
GTGCCCCCTCGTGTTTGATTTTTCGCCGTTTTGGAATGTTAAAAACTAAG
CCTCGGGACATCAATAGCTCGGGTGTTTTTTTGCCTTCTTGAATGGATGC
ACTCTTCACCATCGCCTCTCGTTTGTTGGGTTCATTAAAAACGCTTCACG
CCAGTGGCTGCTGCTGGTCATAGACCTGGATGGCCCATGCAGTTTATTCG
CCGATTGTAGGCGACCGGTGTTAAAATGAGTGGGCTTGATGTGTCAGGAA
GAACTTGAACGGTGGTTTGGCGGCAGAGAACCCTTGCAAGGCCCATAGCT
TCCACAGCTGGGTTCGCATTCGTCGAAAAAAGTAGGTAATAAAAACAATC
GAGCCAGTATGTTTCAGAGCTTGTGGCATGGCAACGGATTTTGACCAAAG
TCCTTAACACAGGACGCAACGCGCCCCCCCGCACATGTTTGGTCGCCGCG
GCGTAGCCCATGGAAGCGTGTGTGCTCGGAACCCATGACGATCCTTGTTG
GGCAAGCCCGCCAGGACAGATTACATCGTACCGTCATGCTTTGCCATCGT
CGTCAGTCTCGTTCGGCAATCCCTGGGACACATGTCTCAAGTGTCAGG
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Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig119:74470..77467-

>mRNA_E-siliculosus-1a_F_contig119.1216.1 ID=mRNA_E-siliculosus-1a_F_contig119.1216.1|Name=mRNA_E-siliculosus-1a_F_contig119.1216.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=612bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig119:74470..77467- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGGACTTCCACACAAACAAGCGCGTTTGCGACGAGGTGGCGATCATCCC
GTCCAAGCGGATGCGGAACAAGATCGCCGGCTTTGTGACCCACCTCATGA
AGCGTATCCAGAGGGGGCCTGTGAGAGGTATTTCGCTGAAGCTGCAGGAG
GAGGAGCGTGAGAGGCGTATGGACTTCGTGCCCGAGATGGACTTCCACAC
AAACAAGCGCGTTTGCGACGAGGTGGCGATCATCCCGTCCAAGCGGATGC
GGAACAAGATCGCCGGCTTTGTGACCCACCTCATGAAGCGTATCCAGAGG
GGGCCTGTGAGAGGTATTTCGCTGAAGCTGCAGGAGGAGGAGCGTGAGAG
GCGTATGGACTTCGTGCCCGAGGTCTCGGCCATCGAGCAGGAGTCCATCG
ACATCGACCCGGACACGAAGGACCTGCTGGACGCGCTTGACTTCAAGGAC
TTGGCGGGCATCGCTGTATCCGCTGTGCCCCCTCGTGTTTGAGTCTCGGC
CATCGAGCAGGAGTCCATCGACATCGACCCGGACACGAAGGACCTGCTGG
ACGCGCTTGACTTCAAGGACTTGGCGGGCATCGCTGTATCCGCTGTGCCC
CCTCGTGTTTGA
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