prot_E-siliculosus-1a_F_contig119.1215.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig119.1215.1
Unique Nameprot_E-siliculosus-1a_F_contig119.1215.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length659
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig119.1215.1 vs. uniprot
Match: A0A6H5KUQ8_9PHAE (MYB protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUQ8_9PHAE)

HSP 1 Score: 1085 bits (2805), Expect = 0.000e+0
Identity = 568/639 (88.89%), Postives = 592/639 (92.64%), Query Frame = 0
Query:   22 MEKLGGSKRRGLSPSR--KNSKEQDKKAFKTVTPSWIPHATVNQPAHQRANESASKALEHKERVRSISNSQREFAAQFSSSAKSGVERQGNARVAGNSRWVSKPGGTASTTPLKSPGGIHGPDTERHERAGVNIPVTQGAGESREKDGLRSEPHDRRGASSMEGSRNIDGVRQRGGGRRQGDENQEKSTARCQAEGALVKGPWTTEEDQIIIDCINEKMTRWSEIAERVEGRVGKQCRERWFNHLDPTLKKTSWTPEEDEILVQGQARFGNSWTKIAKLLPGRSENSVKNRWNSAARKKSTTSSQRRVSDWRNIAMPSEGRTGGQMQYVMMPSAHHMNPQLTPSAAPMMGSTIPIMDMPRSPTCLLQYFPGSMPINPLHGLSMQQHWPSQQVPLLEPSRFPGSDGLQALHARVYGQMAPAQQMYGQPFLLQPAFSMPPPVPLAAEGLSQQPFPVSMAAPSIVAATGPEYSVRGCPSSTSGANGVSTAPGAVKETASAETSSGSLQSPAQNGQPQPLSETEMAFNADDELALANTLLSLSLEEQANVGAGFPGGRQVWGSKGQLNEFDGLRGLGTYDVGLGSEHMTHNGKLDGSVLTNVVLPEGYHRKEATDSSQLLQAPVEPQQALEREVGDTSREGCP 658
            MEKL GSKRRGLSPS   +N KEQDKKAFKTVTPSWIPHATVNQPAHQRANESASKALEH+ERVRSIS+SQREFAAQFS+SAKSGVERQ NA   GNSRWVSKPG TAST PLKSPGGIHGP TE HE+AG+NIP TQGA ESREKD  RSEPHDRR ASSMEGSRNIDGVRQRGGG RQGDEN+EKSTARCQAEGALVKGPWTTEEDQIIIDCINEKMTRWSEIAERVEGRVGKQCRERWFNHLDPTLKK+SWTPEEDEILVQGQARFGNSWTKIAKLLPGRSEN+VKNRWNSAARKKSTTSSQRRVS+WRN+AMPSE RTGGQMQYVMMPSA HMNPQLTP+AAPMMG+TIPIMDMPRSPTCLLQ+ PG MPI PLHG+ +QQ WPSQQ+PLLE SRFPGS+GLQ LHAR+YG+MA AQQMYGQPFLLQP FSMPPPVPL AEGLSQQPFPVSMAAPSIVAATGP+YSVR CPS TSGA+GVS APGAV ETA AE S+GSLQSPAQNGQPQPLSETEMAFN DDELALANTLLSLSLEEQANVGAGF GGRQVWG +GQLNEFD LRG GTYDVGLGS HMTHNGKLDGSV  N VLPEGYHRKEATDSSQLLQAPV PQQALEREVGDTSREGCP
Sbjct:    1 MEKLRGSKRRGLSPSTSWENIKEQDKKAFKTVTPSWIPHATVNQPAHQRANESASKALEHEERVRSISSSQREFAAQFSTSAKSGVERQRNAPATGNSRWVSKPGRTASTAPLKSPGGIHGPATESHEKAGMNIPATQGARESREKDERRSEPHDRRRASSMEGSRNIDGVRQRGGGERQGDENKEKSTARCQAEGALVKGPWTTEEDQIIIDCINEKMTRWSEIAERVEGRVGKQCRERWFNHLDPTLKKSSWTPEEDEILVQGQARFGNSWTKIAKLLPGRSENAVKNRWNSAARKKSTTSSQRRVSEWRNVAMPSEARTGGQMQYVMMPSARHMNPQLTPAAAPMMGTTIPIMDMPRSPTCLLQHCPGIMPIYPLHGMPVQQQWPSQQIPLLESSRFPGSNGLQELHARLYGRMALAQQMYGQPFLLQPVFSMPPPVPLTAEGLSQQPFPVSMAAPSIVAATGPDYSVRECPSGTSGASGVSIAPGAVTETAFAEASAGSLQSPAQNGQPQPLSETEMAFNVDDELALANTLLSLSLEEQANVGAGFSGGRQVWGRRGQLNEFDVLRGFGTYDVGLGSAHMTHNGKLDGSVSRNGVLPEGYHRKEATDSSQLLQAPVRPQQALEREVGDTSREGCP 639          
BLAST of mRNA_E-siliculosus-1a_F_contig119.1215.1 vs. uniprot
Match: A0A7S2RZ51_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RZ51_9STRA)

HSP 1 Score: 176 bits (445), Expect = 2.030e-42
Identity = 78/102 (76.47%), Postives = 91/102 (89.22%), Query Frame = 0
Query:  217 LVKGPWTTEEDQIIIDCINEKMTRWSEIAERVEGRVGKQCRERWFNHLDPTLKKTSWTPEEDEILVQGQARFGNSWTKIAKLLPGRSENSVKNRWNSAARKK 318
            LVKGPWT EEDQIIIDCI   +T+WSEIAER+ GR+GKQCRERWFNHLDP+LKK  WT EED +LV+ Q+++GNSWTKIAKLLPGRSEN+VKNRWNSA R++
Sbjct:  306 LVKGPWTKEEDQIIIDCIEAGITKWSEIAERIPGRIGKQCRERWFNHLDPSLKKGGWTEEEDAVLVEAQSKWGNSWTKIAKLLPGRSENAVKNRWNSATRRR 407          
BLAST of mRNA_E-siliculosus-1a_F_contig119.1215.1 vs. uniprot
Match: A0A5A8DBZ9_CAFRO (Uncharacterized protein n=4 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DBZ9_CAFRO)

HSP 1 Score: 167 bits (423), Expect = 5.880e-42
Identity = 73/102 (71.57%), Postives = 87/102 (85.29%), Query Frame = 0
Query:  217 LVKGPWTTEEDQIIIDCINEKMTRWSEIAERVEGRVGKQCRERWFNHLDPTLKKTSWTPEEDEILVQGQARFGNSWTKIAKLLPGRSENSVKNRWNSAARKK 318
            LVKGPWTTEEDQ+I++CIN  +T+WSEI+ER+ GR+GKQCRERWFNHLDP++KK  W+ EED IL + Q   GN W +IAKLLPGRSENSVKNRWNSA R+K
Sbjct:   60 LVKGPWTTEEDQVIVNCINAGITKWSEISERIPGRIGKQCRERWFNHLDPSIKKDPWSAEEDRILEEAQCSIGNKWCEIAKLLPGRSENSVKNRWNSAMRRK 161          
BLAST of mRNA_E-siliculosus-1a_F_contig119.1215.1 vs. uniprot
Match: A0A7S2SVF3_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SVF3_9STRA)

HSP 1 Score: 166 bits (420), Expect = 2.480e-41
Identity = 77/104 (74.04%), Postives = 87/104 (83.65%), Query Frame = 0
Query:  214 EGALVKGPWTTEEDQIIIDCINEKMTRWSEIAERVEGRVGKQCRERWFNHLDPTLKKTSWTPEEDEILVQGQARFGNSWTKIAKLLPGRSENSVKNRWNSAARK 317
            E  LVKG WT EEDQIIIDCI   + RWSEIAE + GRVGKQ RERWFNHLDPT+KK SWT EED IL   QAR+GNSWTKIA+LLPGR+EN++KNRWNSA+R+
Sbjct:   87 ERGLVKGTWTKEEDQIIIDCIEAGINRWSEIAEYIPGRVGKQARERWFNHLDPTIKKGSWTDEEDAILTVAQARWGNSWTKIARLLPGRAENTIKNRWNSASRR 190          
BLAST of mRNA_E-siliculosus-1a_F_contig119.1215.1 vs. uniprot
Match: F0Y4D5_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y4D5_AURAN)

HSP 1 Score: 152 bits (383), Expect = 6.800e-40
Identity = 69/98 (70.41%), Postives = 82/98 (83.67%), Query Frame = 0
Query:  217 LVKGPWTTEEDQIIIDCINEKMTRWSEIAERVEGRVGKQCRERWFNHLDPTLKKTSWTPEEDEILVQGQARFGNSWTKIAKLLPGRSENSVKNRWNSA 314
            LVKG +T EED+III+C+ E   RW +IAER+ GR+GKQCRERW NHLDP LKK  WT EED ILV+ Q RFGN+WTKIA+LLPGR+E++VKNRWNSA
Sbjct:   18 LVKGAFTEEEDKIIIECMREGGLRWMQIAERIPGRIGKQCRERWTNHLDPNLKKGGWTREEDAILVEAQQRFGNAWTKIAELLPGRAESAVKNRWNSA 115          
BLAST of mRNA_E-siliculosus-1a_F_contig119.1215.1 vs. uniprot
Match: A0A2R5G768_9STRA (Transcription factor MYB3R-4 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G768_9STRA)

HSP 1 Score: 160 bits (406), Expect = 1.250e-37
Identity = 71/102 (69.61%), Postives = 85/102 (83.33%), Query Frame = 0
Query:  217 LVKGPWTTEEDQIIIDCINEKMTRWSEIAERVEGRVGKQCRERWFNHLDPTLKKTSWTPEEDEILVQGQARFGNSWTKIAKLLPGRSENSVKNRWNSAARKK 318
            LVKGPWT EED +I  CI  K+T+WSEIAER+ GR+GKQCRERWFNHLDPT+  ++WT EE+++LV  QA FGN W +IAKLLPGR EN+VKNRWNSA R+K
Sbjct:  224 LVKGPWTEEEDNMIRACIERKITKWSEIAERIPGRIGKQCRERWFNHLDPTIDHSAWTEEEEKVLVTAQATFGNRWCEIAKLLPGRPENAVKNRWNSAIRRK 325          
BLAST of mRNA_E-siliculosus-1a_F_contig119.1215.1 vs. uniprot
Match: A0A7S4DB75_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DB75_HETAK)

HSP 1 Score: 151 bits (381), Expect = 1.300e-37
Identity = 64/98 (65.31%), Postives = 81/98 (82.65%), Query Frame = 0
Query:  217 LVKGPWTTEEDQIIIDCINEKMTRWSEIAERVEGRVGKQCRERWFNHLDPTLKKTSWTPEEDEILVQGQARFGNSWTKIAKLLPGRSENSVKNRWNSA 314
            LVKG WT EED +I+ C+   + +WS+IAER+ GR+GKQ RERWFNHLDP LKK  W+PEED +L + QAR+GN+WTKIA+LLPGRS+NS+KN WNS+
Sbjct:  131 LVKGAWTKEEDAVIVACMESGIKKWSKIAERIPGRIGKQVRERWFNHLDPHLKKGGWSPEEDAVLAEAQARWGNAWTKIARLLPGRSDNSIKNHWNSS 228          
BLAST of mRNA_E-siliculosus-1a_F_contig119.1215.1 vs. uniprot
Match: A0A7S2BQG7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BQG7_9STRA)

HSP 1 Score: 144 bits (362), Expect = 2.140e-36
Identity = 66/105 (62.86%), Postives = 79/105 (75.24%), Query Frame = 0
Query:  217 LVKGPWTTEEDQIIIDCI---NEKMTRWSEIAERVEGRVGKQCRERWFNHLDPTLKKTSWTPEEDEILVQGQARFGNSWTKIAKLLPGRSENSVKNRWNSAARKK 318
            L KGPWT EED I+ D +        +WS IA ++ GR+GKQCRERWFNHLDP + K  WTPEED I+ + Q +FGN W+ IAKLLPGR+ENSVKNRWNS+ARKK
Sbjct:   57 LHKGPWTEEEDGIVRDMVLMYGAGKVKWSAIAAKLHGRIGKQCRERWFNHLDPNINKGEWTPEEDRIVFEAQNQFGNRWSDIAKLLPGRTENSVKNRWNSSARKK 161          
BLAST of mRNA_E-siliculosus-1a_F_contig119.1215.1 vs. uniprot
Match: W7TBR6_9STRA (Myb-related 3r-1-like protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TBR6_9STRA)

HSP 1 Score: 156 bits (394), Expect = 2.740e-36
Identity = 68/99 (68.69%), Postives = 83/99 (83.84%), Query Frame = 0
Query:  217 LVKGPWTTEEDQIIIDCINEKMTRWSEIAERVEGRVGKQCRERWFNHLDPTLKKTSWTPEEDEILVQGQARFGNSWTKIAKLLPGRSENSVKNRWNSAA 315
            LVKGPW  EED +I+ C+   +T+WSEIAER+ GR+GKQCRERW NHLDP++ K++W+ EED+ L+ GQAR GN+W KIA LLPGRSENSVKNRWNSAA
Sbjct:  182 LVKGPWLEEEDAVILQCMRSGLTKWSEIAERIPGRLGKQCRERWLNHLDPSVSKSAWSLEEDKALLAGQARHGNAWAKIADLLPGRSENSVKNRWNSAA 280          
BLAST of mRNA_E-siliculosus-1a_F_contig119.1215.1 vs. uniprot
Match: F0YEA4_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YEA4_AURAN)

HSP 1 Score: 142 bits (359), Expect = 7.110e-36
Identity = 64/102 (62.75%), Postives = 82/102 (80.39%), Query Frame = 0
Query:  217 LVKGPWTTEEDQIIIDCINE-KMTRWSEIAERVEGRVGKQCRERWFNHLDPTLKKTSWTPEEDEILVQGQARFGNSWTKIAKLLPGRSENSVKNRWNSAARK 317
            LVKG +T +ED+II+  + E +   W +IA R+ GR+GKQCRERW NHLDP+LKK  WTPEED I+ + Q R+GN+WTKIA+LLPGR+EN+VKNRWNSA R+
Sbjct:   71 LVKGAFTEDEDEIIVRAMKEGRQLTWMQIAARIPGRIGKQCRERWTNHLDPSLKKGGWTPEEDSIMAEAQTRWGNAWTKIAELLPGRAENAVKNRWNSAFRR 172          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig119.1215.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KUQ8_9PHAE0.000e+088.89MYB protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
A0A7S2RZ51_9STRA2.030e-4276.47Hypothetical protein n=2 Tax=Rhizochromulina marin... [more]
A0A5A8DBZ9_CAFRO5.880e-4271.57Uncharacterized protein n=4 Tax=Cafeteria roenberg... [more]
A0A7S2SVF3_9STRA2.480e-4174.04Hypothetical protein n=2 Tax=Rhizochromulina marin... [more]
F0Y4D5_AURAN6.800e-4070.41Uncharacterized protein (Fragment) n=1 Tax=Aureoco... [more]
A0A2R5G768_9STRA1.250e-3769.61Transcription factor MYB3R-4 n=1 Tax=Hondaea ferme... [more]
A0A7S4DB75_HETAK1.300e-3765.31Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S2BQG7_9STRA2.140e-3662.86Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
W7TBR6_9STRA2.740e-3668.69Myb-related 3r-1-like protein n=2 Tax=Monodopsidac... [more]
F0YEA4_AURAN7.110e-3662.75Uncharacterized protein (Fragment) n=1 Tax=Aureoco... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001005SANT/Myb domainSMARTSM00717santcoord: 218..266
e-value: 2.5E-13
score: 60.3
coord: 269..317
e-value: 1.9E-16
score: 70.6
IPR001005SANT/Myb domainPFAMPF00249Myb_DNA-bindingcoord: 219..264
e-value: 3.2E-13
score: 49.7
coord: 271..313
e-value: 6.1E-16
score: 58.3
NoneNo IPR availableGENE3D1.10.10.60coord: 216..270
e-value: 7.5E-21
score: 75.8
NoneNo IPR availableGENE3D1.10.10.60coord: 271..329
e-value: 6.8E-19
score: 69.5
NoneNo IPR availablePANTHERPTHR45614:SF5TRANSCRIPTIONAL ACTIVATOR MYBcoord: 217..368
IPR015495Myb-like transcription factorPANTHERPTHR45614FAMILY NOT NAMEDcoord: 217..368
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 265..319
score: 27.115
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 214..264
score: 15.989
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 244..322
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 216..256

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig119contigE-siliculosus-1a_F_contig119:65705..72421 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig119.1215.1mRNA_E-siliculosus-1a_F_contig119.1215.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig119 65705..73357 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig119.1215.1 ID=prot_E-siliculosus-1a_F_contig119.1215.1|Name=mRNA_E-siliculosus-1a_F_contig119.1215.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=659bp
MLTCSQHTRQTVRSPPVKVSDMEKLGGSKRRGLSPSRKNSKEQDKKAFKT
VTPSWIPHATVNQPAHQRANESASKALEHKERVRSISNSQREFAAQFSSS
AKSGVERQGNARVAGNSRWVSKPGGTASTTPLKSPGGIHGPDTERHERAG
VNIPVTQGAGESREKDGLRSEPHDRRGASSMEGSRNIDGVRQRGGGRRQG
DENQEKSTARCQAEGALVKGPWTTEEDQIIIDCINEKMTRWSEIAERVEG
RVGKQCRERWFNHLDPTLKKTSWTPEEDEILVQGQARFGNSWTKIAKLLP
GRSENSVKNRWNSAARKKSTTSSQRRVSDWRNIAMPSEGRTGGQMQYVMM
PSAHHMNPQLTPSAAPMMGSTIPIMDMPRSPTCLLQYFPGSMPINPLHGL
SMQQHWPSQQVPLLEPSRFPGSDGLQALHARVYGQMAPAQQMYGQPFLLQ
PAFSMPPPVPLAAEGLSQQPFPVSMAAPSIVAATGPEYSVRGCPSSTSGA
NGVSTAPGAVKETASAETSSGSLQSPAQNGQPQPLSETEMAFNADDELAL
ANTLLSLSLEEQANVGAGFPGGRQVWGSKGQLNEFDGLRGLGTYDVGLGS
EHMTHNGKLDGSVLTNVVLPEGYHRKEATDSSQLLQAPVEPQQALEREVG
DTSREGCP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009057Homeobox-like_sf
IPR017930Myb_dom
IPR015495Myb-like_TF
IPR001005SANT/Myb