mRNA_E-siliculosus-1a_F_contig119.1215.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig119.1215.1 vs. uniprot
Match: A0A6H5KUQ8_9PHAE (MYB protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUQ8_9PHAE) HSP 1 Score: 1085 bits (2806), Expect = 0.000e+0 Identity = 568/639 (88.89%), Postives = 592/639 (92.64%), Query Frame = 1
Query: 64 MEKLGGSKRRGLSPSR--KNSKEQDKKAFKTVTPSWIPHATVNQPAHQRANESASKALEHKERVRSISNSQREFAAQFSSSAKSGVERQGNARVAGNSRWVSKPGGTASTTPLKSPGGIHGPDTERHERAGVNIPVTQGAGESREKDGLRSEPHDRRGASSMEGSRNIDGVRQRGGGRRQGDENQEKSTARCQAEGALVKGPWTTEEDQIIIDCINEKMTRWSEIAERVEGRVGKQCRERWFNHLDPTLKKTSWTPEEDEILVQGQARFGNSWTKIAKLLPGRSENSVKNRWNSAARKKSTTSSQRRVSDWRNIAMPSEGRTGGQMQYVMMPSAHHMNPQLTPSAAPMMGSTIPIMDMPRSPTCLLQYFPGSMPINPLHGLSMQQHWPSQQVPLLEPSRFPGSDGLQALHARVYGQMAPAQQMYGQPFLLQPAFSMPPPVPLAAEGLSQQPFPVSMAAPSIVAATGPEYSVRGCPSSTSGANGVSTAPGAVKETASAETSSGSLQSPAQNGQPQPLSETEMAFNADDELALANTLLSLSLEEQANVGAGFPGGRQVWGSKGQLNEFDGLRGLGTYDVGLGSEHMTHNGKLDGSVLTNVVLPEGYHRKEATDSSQLLQAPVEPQQALEREVGDTSREGCP 1974
MEKL GSKRRGLSPS +N KEQDKKAFKTVTPSWIPHATVNQPAHQRANESASKALEH+ERVRSIS+SQREFAAQFS+SAKSGVERQ NA GNSRWVSKPG TAST PLKSPGGIHGP TE HE+AG+NIP TQGA ESREKD RSEPHDRR ASSMEGSRNIDGVRQRGGG RQGDEN+EKSTARCQAEGALVKGPWTTEEDQIIIDCINEKMTRWSEIAERVEGRVGKQCRERWFNHLDPTLKK+SWTPEEDEILVQGQARFGNSWTKIAKLLPGRSEN+VKNRWNSAARKKSTTSSQRRVS+WRN+AMPSE RTGGQMQYVMMPSA HMNPQLTP+AAPMMG+TIPIMDMPRSPTCLLQ+ PG MPI PLHG+ +QQ WPSQQ+PLLE SRFPGS+GLQ LHAR+YG+MA AQQMYGQPFLLQP FSMPPPVPL AEGLSQQPFPVSMAAPSIVAATGP+YSVR CPS TSGA+GVS APGAV ETA AE S+GSLQSPAQNGQPQPLSETEMAFN DDELALANTLLSLSLEEQANVGAGF GGRQVWG +GQLNEFD LRG GTYDVGLGS HMTHNGKLDGSV N VLPEGYHRKEATDSSQLLQAPV PQQALEREVGDTSREGCP
Sbjct: 1 MEKLRGSKRRGLSPSTSWENIKEQDKKAFKTVTPSWIPHATVNQPAHQRANESASKALEHEERVRSISSSQREFAAQFSTSAKSGVERQRNAPATGNSRWVSKPGRTASTAPLKSPGGIHGPATESHEKAGMNIPATQGARESREKDERRSEPHDRRRASSMEGSRNIDGVRQRGGGERQGDENKEKSTARCQAEGALVKGPWTTEEDQIIIDCINEKMTRWSEIAERVEGRVGKQCRERWFNHLDPTLKKSSWTPEEDEILVQGQARFGNSWTKIAKLLPGRSENAVKNRWNSAARKKSTTSSQRRVSEWRNVAMPSEARTGGQMQYVMMPSARHMNPQLTPAAAPMMGTTIPIMDMPRSPTCLLQHCPGIMPIYPLHGMPVQQQWPSQQIPLLESSRFPGSNGLQELHARLYGRMALAQQMYGQPFLLQPVFSMPPPVPLTAEGLSQQPFPVSMAAPSIVAATGPDYSVRECPSGTSGASGVSIAPGAVTETAFAEASAGSLQSPAQNGQPQPLSETEMAFNVDDELALANTLLSLSLEEQANVGAGFSGGRQVWGRRGQLNEFDVLRGFGTYDVGLGSAHMTHNGKLDGSVSRNGVLPEGYHRKEATDSSQLLQAPVRPQQALEREVGDTSREGCP 639
BLAST of mRNA_E-siliculosus-1a_F_contig119.1215.1 vs. uniprot
Match: D7FYT4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYT4_ECTSI) HSP 1 Score: 206 bits (525), Expect = 1.390e-58 Identity = 97/108 (89.81%), Postives = 102/108 (94.44%), Query Frame = 3
Query: 1134 KKPYLFVTIFSWQHAHQSVAWVVYAATLAQSTSSIAGTLAIPWLRRSTSITCTCIRADGTCPADVWTAFFASACVLDAATGTPCSGGPQPAAVSGLHGCTKHCCGNRA 1457
KK YLFVTIFSWQHAHQS+AWV YAATLAQSTSSIAGTLAIPWLRRST ITCTC+RADGTCPADVWTAFFASACV+DAATGTPCSGGP PAAV G++GC KHCCGNRA
Sbjct: 26 KKSYLFVTIFSWQHAHQSIAWVAYAATLAQSTSSIAGTLAIPWLRRSTRITCTCLRADGTCPADVWTAFFASACVVDAATGTPCSGGPPPAAVCGVYGCAKHCCGNRA 133
BLAST of mRNA_E-siliculosus-1a_F_contig119.1215.1 vs. uniprot
Match: A0A7S2RZ51_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RZ51_9STRA) HSP 1 Score: 176 bits (445), Expect = 2.850e-41 Identity = 78/102 (76.47%), Postives = 91/102 (89.22%), Query Frame = 1
Query: 649 LVKGPWTTEEDQIIIDCINEKMTRWSEIAERVEGRVGKQCRERWFNHLDPTLKKTSWTPEEDEILVQGQARFGNSWTKIAKLLPGRSENSVKNRWNSAARKK 954
LVKGPWT EEDQIIIDCI +T+WSEIAER+ GR+GKQCRERWFNHLDP+LKK WT EED +LV+ Q+++GNSWTKIAKLLPGRSEN+VKNRWNSA R++
Sbjct: 306 LVKGPWTKEEDQIIIDCIEAGITKWSEIAERIPGRIGKQCRERWFNHLDPSLKKGGWTEEEDAVLVEAQSKWGNSWTKIAKLLPGRSENAVKNRWNSATRRR 407
BLAST of mRNA_E-siliculosus-1a_F_contig119.1215.1 vs. uniprot
Match: A0A5A8DBZ9_CAFRO (Uncharacterized protein n=4 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DBZ9_CAFRO) HSP 1 Score: 167 bits (423), Expect = 3.810e-41 Identity = 73/102 (71.57%), Postives = 87/102 (85.29%), Query Frame = 1
Query: 649 LVKGPWTTEEDQIIIDCINEKMTRWSEIAERVEGRVGKQCRERWFNHLDPTLKKTSWTPEEDEILVQGQARFGNSWTKIAKLLPGRSENSVKNRWNSAARKK 954
LVKGPWTTEEDQ+I++CIN +T+WSEI+ER+ GR+GKQCRERWFNHLDP++KK W+ EED IL + Q GN W +IAKLLPGRSENSVKNRWNSA R+K
Sbjct: 60 LVKGPWTTEEDQVIVNCINAGITKWSEISERIPGRIGKQCRERWFNHLDPSIKKDPWSAEEDRILEEAQCSIGNKWCEIAKLLPGRSENSVKNRWNSAMRRK 161
BLAST of mRNA_E-siliculosus-1a_F_contig119.1215.1 vs. uniprot
Match: A0A7S2SVF3_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SVF3_9STRA) HSP 1 Score: 166 bits (420), Expect = 1.550e-40 Identity = 77/104 (74.04%), Postives = 87/104 (83.65%), Query Frame = 1
Query: 640 EGALVKGPWTTEEDQIIIDCINEKMTRWSEIAERVEGRVGKQCRERWFNHLDPTLKKTSWTPEEDEILVQGQARFGNSWTKIAKLLPGRSENSVKNRWNSAARK 951
E LVKG WT EEDQIIIDCI + RWSEIAE + GRVGKQ RERWFNHLDPT+KK SWT EED IL QAR+GNSWTKIA+LLPGR+EN++KNRWNSA+R+
Sbjct: 87 ERGLVKGTWTKEEDQIIIDCIEAGINRWSEIAEYIPGRVGKQARERWFNHLDPTIKKGSWTDEEDAILTVAQARWGNSWTKIARLLPGRAENTIKNRWNSASRR 190
BLAST of mRNA_E-siliculosus-1a_F_contig119.1215.1 vs. uniprot
Match: F0Y4D5_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y4D5_AURAN) HSP 1 Score: 152 bits (383), Expect = 2.300e-39 Identity = 69/98 (70.41%), Postives = 82/98 (83.67%), Query Frame = 1
Query: 649 LVKGPWTTEEDQIIIDCINEKMTRWSEIAERVEGRVGKQCRERWFNHLDPTLKKTSWTPEEDEILVQGQARFGNSWTKIAKLLPGRSENSVKNRWNSA 942
LVKG +T EED+III+C+ E RW +IAER+ GR+GKQCRERW NHLDP LKK WT EED ILV+ Q RFGN+WTKIA+LLPGR+E++VKNRWNSA
Sbjct: 18 LVKGAFTEEEDKIIIECMREGGLRWMQIAERIPGRIGKQCRERWTNHLDPNLKKGGWTREEDAILVEAQQRFGNAWTKIAELLPGRAESAVKNRWNSA 115
BLAST of mRNA_E-siliculosus-1a_F_contig119.1215.1 vs. uniprot
Match: A0A7S4DB75_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DB75_HETAK) HSP 1 Score: 151 bits (381), Expect = 4.530e-37 Identity = 64/98 (65.31%), Postives = 81/98 (82.65%), Query Frame = 1
Query: 649 LVKGPWTTEEDQIIIDCINEKMTRWSEIAERVEGRVGKQCRERWFNHLDPTLKKTSWTPEEDEILVQGQARFGNSWTKIAKLLPGRSENSVKNRWNSA 942
LVKG WT EED +I+ C+ + +WS+IAER+ GR+GKQ RERWFNHLDP LKK W+PEED +L + QAR+GN+WTKIA+LLPGRS+NS+KN WNS+
Sbjct: 131 LVKGAWTKEEDAVIVACMESGIKKWSKIAERIPGRIGKQVRERWFNHLDPHLKKGGWSPEEDAVLAEAQARWGNAWTKIARLLPGRSDNSIKNHWNSS 228
BLAST of mRNA_E-siliculosus-1a_F_contig119.1215.1 vs. uniprot
Match: A0A2R5G768_9STRA (Transcription factor MYB3R-4 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G768_9STRA) HSP 1 Score: 160 bits (406), Expect = 9.110e-37 Identity = 71/102 (69.61%), Postives = 85/102 (83.33%), Query Frame = 1
Query: 649 LVKGPWTTEEDQIIIDCINEKMTRWSEIAERVEGRVGKQCRERWFNHLDPTLKKTSWTPEEDEILVQGQARFGNSWTKIAKLLPGRSENSVKNRWNSAARKK 954
LVKGPWT EED +I CI K+T+WSEIAER+ GR+GKQCRERWFNHLDPT+ ++WT EE+++LV QA FGN W +IAKLLPGR EN+VKNRWNSA R+K
Sbjct: 224 LVKGPWTEEEDNMIRACIERKITKWSEIAERIPGRIGKQCRERWFNHLDPTIDHSAWTEEEEKVLVTAQATFGNRWCEIAKLLPGRPENAVKNRWNSAIRRK 325
BLAST of mRNA_E-siliculosus-1a_F_contig119.1215.1 vs. uniprot
Match: A0A7S2BQG7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BQG7_9STRA) HSP 1 Score: 144 bits (362), Expect = 5.740e-36 Identity = 66/105 (62.86%), Postives = 79/105 (75.24%), Query Frame = 1
Query: 649 LVKGPWTTEEDQIIIDCI---NEKMTRWSEIAERVEGRVGKQCRERWFNHLDPTLKKTSWTPEEDEILVQGQARFGNSWTKIAKLLPGRSENSVKNRWNSAARKK 954
L KGPWT EED I+ D + +WS IA ++ GR+GKQCRERWFNHLDP + K WTPEED I+ + Q +FGN W+ IAKLLPGR+ENSVKNRWNS+ARKK
Sbjct: 57 LHKGPWTEEEDGIVRDMVLMYGAGKVKWSAIAAKLHGRIGKQCRERWFNHLDPNINKGEWTPEEDRIVFEAQNQFGNRWSDIAKLLPGRTENSVKNRWNSSARKK 161
BLAST of mRNA_E-siliculosus-1a_F_contig119.1215.1 vs. uniprot
Match: W7TBR6_9STRA (Myb-related 3r-1-like protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TBR6_9STRA) HSP 1 Score: 156 bits (394), Expect = 1.550e-35 Identity = 68/99 (68.69%), Postives = 83/99 (83.84%), Query Frame = 1
Query: 649 LVKGPWTTEEDQIIIDCINEKMTRWSEIAERVEGRVGKQCRERWFNHLDPTLKKTSWTPEEDEILVQGQARFGNSWTKIAKLLPGRSENSVKNRWNSAA 945
LVKGPW EED +I+ C+ +T+WSEIAER+ GR+GKQCRERW NHLDP++ K++W+ EED+ L+ GQAR GN+W KIA LLPGRSENSVKNRWNSAA
Sbjct: 182 LVKGPWLEEEDAVILQCMRSGLTKWSEIAERIPGRLGKQCRERWLNHLDPSVSKSAWSLEEDKALLAGQARHGNAWAKIADLLPGRSENSVKNRWNSAA 280 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig119.1215.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig119.1215.1 >prot_E-siliculosus-1a_F_contig119.1215.1 ID=prot_E-siliculosus-1a_F_contig119.1215.1|Name=mRNA_E-siliculosus-1a_F_contig119.1215.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=659bp MLTCSQHTRQTVRSPPVKVSDMEKLGGSKRRGLSPSRKNSKEQDKKAFKTback to top mRNA from alignment at E-siliculosus-1a_F_contig119:65705..73357+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig119.1215.1 ID=mRNA_E-siliculosus-1a_F_contig119.1215.1|Name=mRNA_E-siliculosus-1a_F_contig119.1215.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=7653bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig119:65705..73357+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig119:65705..73357+ >mRNA_E-siliculosus-1a_F_contig119.1215.1 ID=mRNA_E-siliculosus-1a_F_contig119.1215.1|Name=mRNA_E-siliculosus-1a_F_contig119.1215.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=3954bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig119:65705..73357+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |