prot_E-siliculosus-1a_F_contig119.1212.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig119.1212.1
Unique Nameprot_E-siliculosus-1a_F_contig119.1212.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length267
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig119.1212.1 vs. uniprot
Match: A0A6H5KV87_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KV87_9PHAE)

HSP 1 Score: 463 bits (1191), Expect = 7.990e-162
Identity = 240/256 (93.75%), Postives = 248/256 (96.88%), Query Frame = 0
Query:   11 SVIMATRAQPRTALATMVAFGAGVAYILWRRARSMGDEEMEEWEPVDRDHVVKFFQILNQQSHQSIMSFNQQIAQYRGKVPEQHLTDLAVGHFEDSLAKTQAQVSVGMGISLEDMEDASKYYEEKGDAQVKEQLRHLKNLYLTVSNLPTDEEEPELPDDLTVEKMVTVVTAFFKASNNVIESVVQELLAKGEDITNPETAMKMSMAIQEKNGPATDEAIKRFNLNSTTIGPAMDKFREHAEIKTAIMVGSEEQRQM 266
            SVIMATRAQPRTALATMVAFGAGVAYILWRRA SMGDEEMEEWEPVDR HVVKFFQILNQQ HQSIMSFNQQIAQYRGKVPEQ LTDLAVGHFEDSLAKTQAQVSVGMGISLEDMEDASKYYEEKGD QVKEQLRHLK+LYLTVSNLPTDEEEPELPDDLTVEKMVTVVTAFFKASNNV+ESVVQELLAKGEDI++PETAMKMSM IQE+NGPATDEAIKRFNLNSTTIGPAM+KF+EH EIKTAIMVGSEEQ Q+
Sbjct:  126 SVIMATRAQPRTALATMVAFGAGVAYILWRRAGSMGDEEMEEWEPVDRSHVVKFFQILNQQLHQSIMSFNQQIAQYRGKVPEQQLTDLAVGHFEDSLAKTQAQVSVGMGISLEDMEDASKYYEEKGDPQVKEQLRHLKHLYLTVSNLPTDEEEPELPDDLTVEKMVTVVTAFFKASNNVVESVVQELLAKGEDISSPETAMKMSMIIQERNGPATDEAIKRFNLNSTTIGPAMEKFQEHPEIKTAIMVGSEEQHQI 381          
BLAST of mRNA_E-siliculosus-1a_F_contig119.1212.1 vs. uniprot
Match: D7FYT1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYT1_ECTSI)

HSP 1 Score: 417 bits (1071), Expect = 5.150e-146
Identity = 213/222 (95.95%), Postives = 217/222 (97.75%), Query Frame = 0
Query:   45 MGDEEMEEWEPVDRDHVVKFFQILNQQSHQSIMSFNQQIAQYRGKVPEQHLTDLAVGHFEDSLAKTQAQVSVGMGISLEDMEDASKYYEEKGDAQVKEQLRHLKNLYLTVSNLPTDEEEPELPDDLTVEKMVTVVTAFFKASNNVIESVVQELLAKGEDITNPETAMKMSMAIQEKNGPATDEAIKRFNLNSTTIGPAMDKFREHAEIKTAIMVGSEEQRQM 266
            MGDEEMEEWEPVDRDHVVKFFQILNQQSHQSIMSFNQQI QYRGKVPEQHLTDLAVGHFEDSLAKTQAQ+SVGMGISLEDMEDASKYYEEKGD QVKEQLRHLKNLYLTVSNLPTDEEEPELPDDLTVEKMVTVVTAFFKASNNVIESVVQELLAKG D+TNPETAMKMSMAIQEK+GPATDEAIKRFNLNSTTIGPAMDKFREH EIKTAIMVGSEEQ Q+
Sbjct:    1 MGDEEMEEWEPVDRDHVVKFFQILNQQSHQSIMSFNQQIVQYRGKVPEQHLTDLAVGHFEDSLAKTQAQISVGMGISLEDMEDASKYYEEKGDQQVKEQLRHLKNLYLTVSNLPTDEEEPELPDDLTVEKMVTVVTAFFKASNNVIESVVQELLAKGGDVTNPETAMKMSMAIQEKSGPATDEAIKRFNLNSTTIGPAMDKFREHEEIKTAIMVGSEEQHQI 222          
BLAST of mRNA_E-siliculosus-1a_F_contig119.1212.1 vs. uniprot
Match: A0A6V1QE83_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1QE83_HETAK)

HSP 1 Score: 69.3 bits (168), Expect = 3.520e-10
Identity = 49/213 (23.00%), Postives = 99/213 (46.48%), Query Frame = 0
Query:   47 DEEMEEWEPVDRDHVVKFFQILNQQSHQSIMSFNQQIAQYRGKV-------PEQHLTDLAVGHFEDSLAKTQAQVSVGMGISLEDMEDASKYYEEKGDAQVKEQLRHLKNLYLTVSNLPTDEEEPELPDDLTVEKMVTVVTAFFKASNNVIESVVQELLAKGEDITNPETAMKMSMAIQEKNGPATDEAIKRFNLNSTTIGPAMDKFREHAEI 252
            D ++ E   + +  V++ F  +NQ     +    QQ+ Q   ++       PE+ +       FE  L K + QV        +++E+A++Y+EE+GD +VK  +R L+ +Y  +S      ++ E P DLT EK + ++  +F + +  +  +V+E   KG    +PE    ++  +  +      + ++   L++      + KF E  E+
Sbjct:   40 DVDVIELPDITKAQVLEIFTTINQNMQAKVRELTQQLDQISQQMKAAGQALPEKEIHAYLSQEFESHLKKVEEQVLEKYKTDEDELEEATEYFEEQGDEEVKAVVRQLEVMYEAMSGTA---KKKEAPADLTREKFLALLPVYFGSMSKALAGLVEEAARKGITPQSPEMQQLVATQLDAR----ALKTMQEQGLDNEVFNAGLQKFHEDPEV 245          
BLAST of mRNA_E-siliculosus-1a_F_contig119.1212.1 vs. uniprot
Match: A0A6G0XZ15_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XZ15_9STRA)

HSP 1 Score: 63.2 bits (152), Expect = 5.980e-8
Identity = 50/206 (24.27%), Postives = 101/206 (49.03%), Query Frame = 0
Query:   58 RDHVVKFFQILNQQSHQSIMSF-------NQQIAQYRGKVPEQHLTDLAVGHFEDSLAKTQAQVSVGMGISLEDMEDASKYYEEKGDAQVKEQLRHLKNLYLTVSNLPTDEEEPELPDDLTVEKMVTVVTAFFKASNNVIESVVQELLAKGEDITNPETAMKMSMAIQEKNGPATDEAIKRFNLNSTTIGPAMDKFREHAEIKTAI 256
            +D ++    +++ Q  Q +MS         Q+ AQ   ++PE  L    +G FE+++   ++QV      + +D+  AS YYE   D +V  +LR L+ L+  ++   +   + E+P+DLT+EK ++++    ++ N  +E V QE+  K  D  + E A+       +K    +++  +   L+   +  AM K+++     T +
Sbjct:   65 KDQLLAILGVISTQMGQVVMSLAAIEQKIRQESAQSGRRLPEDQLAAYLMGQFEEAMKAIESQVYSKYNTTEQDVTVASDYYESIEDPEVHAELRKLRELHNLITGAGSL--DVEIPEDLTLEKFLSIMEETMESLNVAMEEVCQEV--KLLDPVDKEEAINQRYV--KKADQLSNDIHQHHGLSREVLQAAMMKYQQEPAFLTRM 264          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig119.1212.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5KV87_9PHAE7.990e-16293.75Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FYT1_ECTSI5.150e-14695.95Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6V1QE83_HETAK3.520e-1023.00Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A6G0XZ15_9STRA5.980e-824.27Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 21..39
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 40..266
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..20
NoneNo IPR availableTMHMMTMhelixcoord: 20..39

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig119contigE-siliculosus-1a_F_contig119:24097..27819 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig119.1212.1mRNA_E-siliculosus-1a_F_contig119.1212.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig119 24097..27819 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig119.1212.1 ID=prot_E-siliculosus-1a_F_contig119.1212.1|Name=mRNA_E-siliculosus-1a_F_contig119.1212.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=267bp
RPQTPRRDPTSVIMATRAQPRTALATMVAFGAGVAYILWRRARSMGDEEM
EEWEPVDRDHVVKFFQILNQQSHQSIMSFNQQIAQYRGKVPEQHLTDLAV
GHFEDSLAKTQAQVSVGMGISLEDMEDASKYYEEKGDAQVKEQLRHLKNL
YLTVSNLPTDEEEPELPDDLTVEKMVTVVTAFFKASNNVIESVVQELLAK
GEDITNPETAMKMSMAIQEKNGPATDEAIKRFNLNSTTIGPAMDKFREHA
EIKTAIMVGSEEQRQM*
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