mRNA_E-siliculosus-1a_F_contig119.1212.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig119.1212.1 vs. uniprot
Match: A0A6H5KV87_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KV87_9PHAE) HSP 1 Score: 463 bits (1191), Expect = 7.990e-162 Identity = 240/256 (93.75%), Postives = 248/256 (96.88%), Query Frame = 1
Query: 31 SVIMATRAQPRTALATMVAFGAGVAYILWRRARSMGDEEMEEWEPVDRDHVVKFFQILNQQSHQSIMSFNQQIAQYRGKVPEQHLTDLAVGHFEDSLAKTQAQVSVGMGISLEDMEDASKYYEEKGDAQVKEQLRHLKNLYLTVSNLPTDEEEPELPDDLTVEKMVTVVTAFFKASNNVIESVVQELLAKGEDITNPETAMKMSMAIQEKNGPATDEAIKRFNLNSTTIGPAMDKFREHAEIKTAIMVGSEEQRQM 798
SVIMATRAQPRTALATMVAFGAGVAYILWRRA SMGDEEMEEWEPVDR HVVKFFQILNQQ HQSIMSFNQQIAQYRGKVPEQ LTDLAVGHFEDSLAKTQAQVSVGMGISLEDMEDASKYYEEKGD QVKEQLRHLK+LYLTVSNLPTDEEEPELPDDLTVEKMVTVVTAFFKASNNV+ESVVQELLAKGEDI++PETAMKMSM IQE+NGPATDEAIKRFNLNSTTIGPAM+KF+EH EIKTAIMVGSEEQ Q+
Sbjct: 126 SVIMATRAQPRTALATMVAFGAGVAYILWRRAGSMGDEEMEEWEPVDRSHVVKFFQILNQQLHQSIMSFNQQIAQYRGKVPEQQLTDLAVGHFEDSLAKTQAQVSVGMGISLEDMEDASKYYEEKGDPQVKEQLRHLKHLYLTVSNLPTDEEEPELPDDLTVEKMVTVVTAFFKASNNVVESVVQELLAKGEDISSPETAMKMSMIIQERNGPATDEAIKRFNLNSTTIGPAMEKFQEHPEIKTAIMVGSEEQHQI 381
BLAST of mRNA_E-siliculosus-1a_F_contig119.1212.1 vs. uniprot
Match: D7FYT1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYT1_ECTSI) HSP 1 Score: 417 bits (1071), Expect = 5.150e-146 Identity = 213/222 (95.95%), Postives = 217/222 (97.75%), Query Frame = 1
Query: 133 MGDEEMEEWEPVDRDHVVKFFQILNQQSHQSIMSFNQQIAQYRGKVPEQHLTDLAVGHFEDSLAKTQAQVSVGMGISLEDMEDASKYYEEKGDAQVKEQLRHLKNLYLTVSNLPTDEEEPELPDDLTVEKMVTVVTAFFKASNNVIESVVQELLAKGEDITNPETAMKMSMAIQEKNGPATDEAIKRFNLNSTTIGPAMDKFREHAEIKTAIMVGSEEQRQM 798
MGDEEMEEWEPVDRDHVVKFFQILNQQSHQSIMSFNQQI QYRGKVPEQHLTDLAVGHFEDSLAKTQAQ+SVGMGISLEDMEDASKYYEEKGD QVKEQLRHLKNLYLTVSNLPTDEEEPELPDDLTVEKMVTVVTAFFKASNNVIESVVQELLAKG D+TNPETAMKMSMAIQEK+GPATDEAIKRFNLNSTTIGPAMDKFREH EIKTAIMVGSEEQ Q+
Sbjct: 1 MGDEEMEEWEPVDRDHVVKFFQILNQQSHQSIMSFNQQIVQYRGKVPEQHLTDLAVGHFEDSLAKTQAQISVGMGISLEDMEDASKYYEEKGDQQVKEQLRHLKNLYLTVSNLPTDEEEPELPDDLTVEKMVTVVTAFFKASNNVIESVVQELLAKGGDVTNPETAMKMSMAIQEKSGPATDEAIKRFNLNSTTIGPAMDKFREHEEIKTAIMVGSEEQHQI 222
BLAST of mRNA_E-siliculosus-1a_F_contig119.1212.1 vs. uniprot
Match: A0A6V1QE83_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1QE83_HETAK) HSP 1 Score: 69.3 bits (168), Expect = 3.520e-10 Identity = 49/213 (23.00%), Postives = 99/213 (46.48%), Query Frame = 1
Query: 139 DEEMEEWEPVDRDHVVKFFQILNQQSHQSIMSFNQQIAQYRGKV-------PEQHLTDLAVGHFEDSLAKTQAQVSVGMGISLEDMEDASKYYEEKGDAQVKEQLRHLKNLYLTVSNLPTDEEEPELPDDLTVEKMVTVVTAFFKASNNVIESVVQELLAKGEDITNPETAMKMSMAIQEKNGPATDEAIKRFNLNSTTIGPAMDKFREHAEI 756
D ++ E + + V++ F +NQ + QQ+ Q ++ PE+ + FE L K + QV +++E+A++Y+EE+GD +VK +R L+ +Y +S ++ E P DLT EK + ++ +F + + + +V+E KG +PE ++ + + + ++ L++ + KF E E+
Sbjct: 40 DVDVIELPDITKAQVLEIFTTINQNMQAKVRELTQQLDQISQQMKAAGQALPEKEIHAYLSQEFESHLKKVEEQVLEKYKTDEDELEEATEYFEEQGDEEVKAVVRQLEVMYEAMSGTA---KKKEAPADLTREKFLALLPVYFGSMSKALAGLVEEAARKGITPQSPEMQQLVATQLDAR----ALKTMQEQGLDNEVFNAGLQKFHEDPEV 245
BLAST of mRNA_E-siliculosus-1a_F_contig119.1212.1 vs. uniprot
Match: A0A6G0XZ15_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XZ15_9STRA) HSP 1 Score: 63.2 bits (152), Expect = 5.980e-8 Identity = 50/206 (24.27%), Postives = 101/206 (49.03%), Query Frame = 1
Query: 172 RDHVVKFFQILNQQSHQSIMSF-------NQQIAQYRGKVPEQHLTDLAVGHFEDSLAKTQAQVSVGMGISLEDMEDASKYYEEKGDAQVKEQLRHLKNLYLTVSNLPTDEEEPELPDDLTVEKMVTVVTAFFKASNNVIESVVQELLAKGEDITNPETAMKMSMAIQEKNGPATDEAIKRFNLNSTTIGPAMDKFREHAEIKTAI 768
+D ++ +++ Q Q +MS Q+ AQ ++PE L +G FE+++ ++QV + +D+ AS YYE D +V +LR L+ L+ ++ + + E+P+DLT+EK ++++ ++ N +E V QE+ K D + E A+ +K +++ + L+ + AM K+++ T +
Sbjct: 65 KDQLLAILGVISTQMGQVVMSLAAIEQKIRQESAQSGRRLPEDQLAAYLMGQFEEAMKAIESQVYSKYNTTEQDVTVASDYYESIEDPEVHAELRKLRELHNLITGAGSL--DVEIPEDLTLEKFLSIMEETMESLNVAMEEVCQEV--KLLDPVDKEEAINQRYV--KKADQLSNDIHQHHGLSREVLQAAMMKYQQEPAFLTRM 264 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig119.1212.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 4
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig119.1212.1 >prot_E-siliculosus-1a_F_contig119.1212.1 ID=prot_E-siliculosus-1a_F_contig119.1212.1|Name=mRNA_E-siliculosus-1a_F_contig119.1212.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=267bp RPQTPRRDPTSVIMATRAQPRTALATMVAFGAGVAYILWRRARSMGDEEMback to top mRNA from alignment at E-siliculosus-1a_F_contig119:24097..27819- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig119.1212.1 ID=mRNA_E-siliculosus-1a_F_contig119.1212.1|Name=mRNA_E-siliculosus-1a_F_contig119.1212.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=3723bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig119:24097..27819- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig119:24097..27819- >mRNA_E-siliculosus-1a_F_contig119.1212.1 ID=mRNA_E-siliculosus-1a_F_contig119.1212.1|Name=mRNA_E-siliculosus-1a_F_contig119.1212.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1602bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig119:24097..27819- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |