prot_E-siliculosus-1a_F_contig119.1208.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig119.1208.1
Unique Nameprot_E-siliculosus-1a_F_contig119.1208.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length233
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig119.1208.1 vs. uniprot
Match: A0A6H5LB71_9PHAE (PC4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LB71_9PHAE)

HSP 1 Score: 407 bits (1047), Expect = 6.490e-143
Identity = 213/232 (91.81%), Postives = 218/232 (93.97%), Query Frame = 0
Query:    1 MQRFGVSARRRGFPSLLIHSSSSRQLSSFSSGPEHDDYWTAAKTEAQTAPAYQQAAARATVPTPSTPTASGDRWAQPGGPSPGTMPMGEAYKPSSSSNMYGGRSSSSYGRSSNTFNSDSGDFVPPPPPFDMQSSIHLSPVRQADVRSFKGTPLVDIRQYFRGAEGQAVPTKKGIALTIPQWRRLQEAMTDIDKEIFALEEKQRSLAAIDEHLLRLAEQPFEVGDEGPDKQAP 232
            MQRFGVSARRRGFPSLLIHSSSSR+LSSFSSGPEHDD+WTAAKTEAQ  PAYQQAAA AT PTP TPTA+GDRWAQPGGPSPGTMPMGEAYKPSSSS MYGGRSSSS GRSSNTFNSDSGDFVPPPP FDMQSS HLSPVRQ DVRSFKG PLVDIRQYFRGAEGQAVPTKKGIALTIPQWRRLQEAM DIDKEIFALEE+QRSLAA+D HLL LAEQPFEVGDEGPDKQAP
Sbjct:    1 MQRFGVSARRRGFPSLLIHSSSSRKLSSFSSGPEHDDFWTAAKTEAQATPAYQQAAANATAPTPWTPTATGDRWAQPGGPSPGTMPMGEAYKPSSSSKMYGGRSSSSNGRSSNTFNSDSGDFVPPPPTFDMQSSTHLSPVRQVDVRSFKGRPLVDIRQYFRGAEGQAVPTKKGIALTIPQWRRLQEAMADIDKEIFALEEQQRSLAAVDAHLLELAEQPFEVGDEGPDKQAP 232          
BLAST of mRNA_E-siliculosus-1a_F_contig119.1208.1 vs. uniprot
Match: D7FYS7_ECTSI (PC4 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYS7_ECTSI)

HSP 1 Score: 184 bits (468), Expect = 9.970e-57
Identity = 92/102 (90.20%), Postives = 95/102 (93.14%), Query Frame = 0
Query:  131 MQSSIHLSPVRQADVRSFKGTPLVDIRQYFRGAEGQAVPTKKGIALTIPQWRRLQEAMTDIDKEIFALEEKQRSLAAIDEHLLRLAEQPFEVGDEGPDKQAP 232
            MQSS+HLSPVRQADVR FKG PLVDIRQYFRGAEGQA PTKKGIALTIPQWRRLQEAM DIDKEIFALEE+QRSLAA+D HLL LAEQPFEVGDE PDKQAP
Sbjct:    1 MQSSMHLSPVRQADVRLFKGRPLVDIRQYFRGAEGQAAPTKKGIALTIPQWRRLQEAMADIDKEIFALEEQQRSLAAVDAHLLELAEQPFEVGDEEPDKQAP 102          
BLAST of mRNA_E-siliculosus-1a_F_contig119.1208.1 vs. uniprot
Match: C3ZA15_BRAFL (Activated RNA polymerase II transcriptional coactivator p15 (Fragment) n=1 Tax=Branchiostoma floridae TaxID=7739 RepID=C3ZA15_BRAFL)

HSP 1 Score: 66.2 bits (160), Expect = 5.250e-11
Identity = 34/65 (52.31%), Postives = 45/65 (69.23%), Query Frame = 0
Query:  135 IHLSPVRQADVRSFKGTPLVDIRQYFRGAEGQAVPTKKGIALTIPQWRRLQEAMTDIDKEIFALE 199
            + LS  R   VR FKG  L+DIR+Y+  A G+  P KKGI+LT  QWRRL+EA+ DID++I  L+
Sbjct:    1 LQLSNKRYVSVREFKGKCLIDIREYY-DAGGELKPGKKGISLTTDQWRRLKEAVDDIDEKIADLD 64          
BLAST of mRNA_E-siliculosus-1a_F_contig119.1208.1 vs. uniprot
Match: A0A8H8CPF0_PSICU (PC4 domain-containing protein n=1 Tax=Psilocybe cubensis TaxID=181762 RepID=A0A8H8CPF0_PSICU)

HSP 1 Score: 68.6 bits (166), Expect = 6.040e-11
Identity = 33/67 (49.25%), Postives = 49/67 (73.13%), Query Frame = 0
Query:  135 IHLSPVRQADVRSFKGTPLVDIRQYFRGAEGQAVPTKKGIALTIPQWRRLQEAMTDIDKEIFALEEK 201
            I L   ++A VRSFKG PL+DIR+++ GA+G   P KKGI+LTI QW+ L++ M+ IDK +  +++K
Sbjct:   88 IDLGKKKRATVRSFKGVPLIDIREFY-GADGDEKPGKKGISLTIEQWQSLRDGMSTIDKLLDEVKKK 153          
BLAST of mRNA_E-siliculosus-1a_F_contig119.1208.1 vs. uniprot
Match: UPI0016041207 (activated RNA polymerase II transcriptional coactivator p15-like isoform X2 n=1 Tax=Branchiostoma floridae TaxID=7739 RepID=UPI0016041207)

HSP 1 Score: 67.0 bits (162), Expect = 9.060e-11
Identity = 35/65 (53.85%), Postives = 45/65 (69.23%), Query Frame = 0
Query:  135 IHLSPVRQADVRSFKGTPLVDIRQYFRGAEGQAVPTKKGIALTIPQWRRLQEAMTDIDKEIFALE 199
            I LS  R   VR FKG  L+DIR+Y+  A G+  P KKGI+LT  QWRRL+EA+ DID++I  L+
Sbjct:   49 IQLSNKRYVSVREFKGKCLIDIREYY-DAGGELKPGKKGISLTTDQWRRLKEAVDDIDEKIADLD 112          
BLAST of mRNA_E-siliculosus-1a_F_contig119.1208.1 vs. uniprot
Match: A0A8H5HMN0_9AGAR (PC4 domain-containing protein n=1 Tax=Tricholomella constricta TaxID=117010 RepID=A0A8H5HMN0_9AGAR)

HSP 1 Score: 68.2 bits (165), Expect = 1.220e-10
Identity = 34/67 (50.75%), Postives = 49/67 (73.13%), Query Frame = 0
Query:  135 IHLSPVRQADVRSFKGTPLVDIRQYFRGAEGQAVPTKKGIALTIPQWRRLQEAMTDIDKEIFALEEK 201
            I L   ++A VRSFKGTPL+DIR+++ GA+G   P KKGI+LT+ QW  L+ +M+ +D E+FA  +K
Sbjct:  106 IELGKKKRATVRSFKGTPLIDIREFY-GADGDEKPGKKGISLTMEQWETLKSSMSTLD-ELFATVKK 170          
BLAST of mRNA_E-siliculosus-1a_F_contig119.1208.1 vs. uniprot
Match: A8D8C5_ARTSF (RNA polymerase II transcriptional coactivator n=1 Tax=Artemia franciscana TaxID=6661 RepID=A8D8C5_ARTSF)

HSP 1 Score: 65.5 bits (158), Expect = 3.020e-10
Identity = 29/66 (43.94%), Postives = 44/66 (66.67%), Query Frame = 0
Query:  130 DMQSSIHLSPVRQADVRSFKGTPLVDIRQYFRGAEGQAVPTKKGIALTIPQWRRLQEAMTDIDKEI 195
            D + +  L   R   VRSFKG   VDIR+Y+  A G  +P KKGI+L++ QW+++QEAM ++D+ +
Sbjct:   40 DEEPTWTLDKKRFLKVRSFKGKTFVDIREYYEDASGNLMPGKKGISLSVQQWKKVQEAMDEVDEAL 105          
BLAST of mRNA_E-siliculosus-1a_F_contig119.1208.1 vs. uniprot
Match: A0A409VM65_PSICY (PC4 domain-containing protein n=1 Tax=Psilocybe cyanescens TaxID=93625 RepID=A0A409VM65_PSICY)

HSP 1 Score: 66.6 bits (161), Expect = 3.850e-10
Identity = 33/67 (49.25%), Postives = 47/67 (70.15%), Query Frame = 0
Query:  135 IHLSPVRQADVRSFKGTPLVDIRQYFRGAEGQAVPTKKGIALTIPQWRRLQEAMTDIDKEIFALEEK 201
            I L   ++A  RSFKG PL+DIR+++ GA+GQ  P KKGIALT+ QW+ L+   + IDK +  L++K
Sbjct:   98 IDLGKKKRAVARSFKGVPLIDIREFY-GADGQEKPGKKGIALTLEQWQSLKSGASAIDKLLEGLKKK 163          
BLAST of mRNA_E-siliculosus-1a_F_contig119.1208.1 vs. uniprot
Match: A0A061AXT8_CYBFA (CYFA0S09e04236g1_1 n=1 Tax=Cyberlindnera fabianii TaxID=36022 RepID=A0A061AXT8_CYBFA)

HSP 1 Score: 64.7 bits (156), Expect = 1.230e-9
Identity = 29/65 (44.62%), Postives = 42/65 (64.62%), Query Frame = 0
Query:  135 IHLSPVRQADVRSFKGTPLVDIRQYFRGAEGQAVPTKKGIALTIPQWRRLQEAMTDIDKEIFALE 199
            + L   ++  VR FKGT LVD+R+Y+   EGQ  P KKGI+LT+ QWR L + M  ++  + A+E
Sbjct:   45 VELGKSKRCTVRQFKGTTLVDVREYYDAGEGQMKPGKKGISLTLDQWRALLDNMDLVEGAVSAME 109          
BLAST of mRNA_E-siliculosus-1a_F_contig119.1208.1 vs. uniprot
Match: UPI001ED87873 (activated RNA polymerase II transcriptional coactivator p15 n=1 Tax=Ischnura elegans TaxID=197161 RepID=UPI001ED87873)

HSP 1 Score: 63.5 bits (153), Expect = 1.620e-9
Identity = 29/62 (46.77%), Postives = 46/62 (74.19%), Query Frame = 0
Query:  134 SIHLSPVRQADVRSFKGTPLVDIRQYFRGAEGQAVPTKKGIALTIPQWRRLQEAMTDIDKEI 195
            S HL  ++ A VR+F+G   VDIR+Y++ ++G+  P KKGI+L++ QWRR++E M +ID+ I
Sbjct:   46 SWHLEKMKYAKVRTFQGKVYVDIREYYQ-SDGKMKPGKKGISLSVDQWRRIKELMPEIDEAI 106          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig119.1208.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5LB71_9PHAE6.490e-14391.81PC4 domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FYS7_ECTSI9.970e-5790.20PC4 domain-containing protein n=1 Tax=Ectocarpus s... [more]
C3ZA15_BRAFL5.250e-1152.31Activated RNA polymerase II transcriptional coacti... [more]
A0A8H8CPF0_PSICU6.040e-1149.25PC4 domain-containing protein n=1 Tax=Psilocybe cu... [more]
UPI00160412079.060e-1153.85activated RNA polymerase II transcriptional coacti... [more]
A0A8H5HMN0_9AGAR1.220e-1050.75PC4 domain-containing protein n=1 Tax=Tricholomell... [more]
A8D8C5_ARTSF3.020e-1043.94RNA polymerase II transcriptional coactivator n=1 ... [more]
A0A409VM65_PSICY3.850e-1049.25PC4 domain-containing protein n=1 Tax=Psilocybe cy... [more]
A0A061AXT8_CYBFA1.230e-944.62CYFA0S09e04236g1_1 n=1 Tax=Cyberlindnera fabianii ... [more]
UPI001ED878731.620e-946.77activated RNA polymerase II transcriptional coacti... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 198..218
NoneNo IPR availablePANTHERPTHR13215RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATORcoord: 72..200
NoneNo IPR availablePANTHERPTHR13215:SF0ACTIVATED RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR P15coord: 72..200
IPR003173Transcriptional coactivator p15 (PC4)PFAMPF02229PC4coord: 136..187
e-value: 2.0E-16
score: 59.4
IPR009044ssDNA-binding transcriptional regulatorGENE3D2.30.31.10coord: 133..198
e-value: 4.2E-20
score: 72.9
IPR009044ssDNA-binding transcriptional regulatorSUPERFAMILY54447ssDNA-binding transcriptional regulator domaincoord: 136..195

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig119contigE-siliculosus-1a_F_contig119:8117..8815 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig119.1208.1mRNA_E-siliculosus-1a_F_contig119.1208.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig119 8117..8815 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig119.1208.1 ID=prot_E-siliculosus-1a_F_contig119.1208.1|Name=mRNA_E-siliculosus-1a_F_contig119.1208.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=233bp
MQRFGVSARRRGFPSLLIHSSSSRQLSSFSSGPEHDDYWTAAKTEAQTAP
AYQQAAARATVPTPSTPTASGDRWAQPGGPSPGTMPMGEAYKPSSSSNMY
GGRSSSSYGRSSNTFNSDSGDFVPPPPPFDMQSSIHLSPVRQADVRSFKG
TPLVDIRQYFRGAEGQAVPTKKGIALTIPQWRRLQEAMTDIDKEIFALEE
KQRSLAAIDEHLLRLAEQPFEVGDEGPDKQAP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009044ssDNA-bd_transcriptional_reg
IPR003173PC4