prot_E-siliculosus-1a_F_contig1186.1193.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1186.1193.1
Unique Nameprot_E-siliculosus-1a_F_contig1186.1193.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length687
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1186.1193.1 vs. uniprot
Match: D8LME0_ECTSI (TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LME0_ECTSI)

HSP 1 Score: 946 bits (2445), Expect = 0.000e+0
Identity = 486/490 (99.18%), Postives = 488/490 (99.59%), Query Frame = 0
Query:   62 MSRKNNSRVTVSATAVLGVLVGLLTAEGASAQQVGNLTALSRGYSVNLTGSSLNNPFDDTSFNPASAIGVSADGTGVYVGGELGGLIHLARSPEDGSLTMTRAWAASDFDEALQSVEQIVVTPDGSKLITLGSRGLGRGTFGVFSISADGDLQLLQEDDHRGIIRAGFPDSSSRDLYAIDDDRSVLTHYTYDGSRFVVSQTVGGFTCLYGLGVAPDGANVYVADDCLYTVTNFRRDPDTGSLTFQDELSGDPRNGDGLGCLKSLSFTEDGAWVVGLDSCDDVISILKRDLDTGTLTPTTLINTDNPDGNTINIDKTWSALVVSDGLGDIYVADWSDSKILWVRADFGVGGDGSVISTNWFSLSFKPSTLIASPDLQTVYVANKENDVWEGGAYPRVAVPTPDSDGSGTSAVNVTLAVALSVSLVAAIVIAGVAAKFIQRKRNISMYAGEEETLRAALEANPNDAVAHNNLGYLMETVYKDFAEAEAHYSE 551
            M+RK+NSRVTVSATAVLGVLVGLLTAEGA AQQVGNLT LSRGYSVNLTGSSLNNPFDDTSFNPASAIGVSADGTGVYVGGELGGLIHLARSPEDGSLTMTRAWAASDFDEALQSVEQIVVTPDGSKLITLGSRGLGRGTFGVFSISADGDLQLLQEDDHRGIIRAGFPDSSSRDLYAIDDDRSVLTHYTYDGSRFVVSQTVGGFTCLYGLGVAPDGANVYVADDCLYTVTNFRRDPDTGSLTFQDELSGDPRNGDGLGCLKSLSFTEDGAWVVGLDSCDDVISILKRDLDTGTLTPTTLINTDNPDGNTINIDKTWSALVVSDGLGDIYVADWSDSKILWVRADFGVGGDGSVISTNWFSLSFKPSTLIASPDLQTVYVANKENDVWEGGAYPRVAVPTPDSDGSGTSAVNVTLAVALSVSLVAAIVIAGVAAKFIQRKRNISMYAGEEETLRAALEANPNDAVAHNNLGYLMETVYKDFAEAEAHYSE
Sbjct:    1 MTRKSNSRVTVSATAVLGVLVGLLTAEGALAQQVGNLTGLSRGYSVNLTGSSLNNPFDDTSFNPASAIGVSADGTGVYVGGELGGLIHLARSPEDGSLTMTRAWAASDFDEALQSVEQIVVTPDGSKLITLGSRGLGRGTFGVFSISADGDLQLLQEDDHRGIIRAGFPDSSSRDLYAIDDDRSVLTHYTYDGSRFVVSQTVGGFTCLYGLGVAPDGANVYVADDCLYTVTNFRRDPDTGSLTFQDELSGDPRNGDGLGCLKSLSFTEDGAWVVGLDSCDDVISILKRDLDTGTLTPTTLINTDNPDGNTINIDKTWSALVVSDGLGDIYVADWSDSKILWVRADFGVGGDGSVISTNWFSLSFKPSTLIASPDLQTVYVANKENDVWEGGAYPRVAVPTPDSDGSGTSAVNVTLAVALSVSLVAAIVIAGVAAKFIQRKRNISMYAGEEETLRAALEANPNDAVAHNNLGYLMETVYKDFAEAEAHYSE 490          
BLAST of mRNA_E-siliculosus-1a_F_contig1186.1193.1 vs. uniprot
Match: A0A835ZFA9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFA9_9STRA)

HSP 1 Score: 172 bits (436), Expect = 4.200e-42
Identity = 147/490 (30.00%), Postives = 221/490 (45.10%), Query Frame = 0
Query:   90 ASAQQVGNLTALSRGYSVNLTG-SSLNNPFDDTSFNPASAIGVSADGTGVYVGGELGGLIHLARSPEDGSLTMTRAWAASDFDEALQSVEQIVVTPDGSKLITLGSRGLGRGTFGVFSISADGDLQLLQEDDHRGIIRAGFPDSSSRDLYAIDDDRSVLTHYTYDGSR--FVVSQTVGGFTCLYG-----LGVAPDGANVYVADDCLYTVTNFRRDPDTGSL--TFQDELSGDPR--NGDGLGCLKSLSFTEDGAWVVGLDSCDDVISILKRDLDTGTLTPTTLINTDNPDGNTINIDKTWSALVVSDGLGDIYVADWSDSKILWVRADFGVGGDGSVISTNWFSLSFKPSTLIASPDLQTVYVANKENDV----------WEGG------AYPRVAVPTPDSDGSGT--SAVNVTLAVALSVSLVAAIVIAGVAAKFIQRKRNISMYAGEEETLRAALEANPNDAVAHNNLGYLMETVYKDFAEAEAHY 549
            A A  VG L+  S   + + T  S  +NPF   + + ASAI VS DG  VYVGG+ GGL  L R    G L   + W AS F  AL++V+ + ++ D   ++  G++    G+ G+FS+  DG   LL +++   I  A F   S+ D Y ID     L  ++Y  +   F V Q +     L G     L ++PDG NVYV D       NF RDP TG +  +    L GDP     DG+G   S++F+    +   L++    +++L R +  G L   +       DG  +        L+ SD   D+YV   S  +I W++ D       ++ +  WF    +P  LIA    + VY      +           W+G       A P    PT     S T  S  + TL +  S      ++IA          +++ +   EEE    AL+A+PNDA+AHNN G+ ++    ++A AE HY
Sbjct:   20 AQAAAVGELSEASTPVAFDFTSLSEASNPFFSKT-SAASAIAVSRDGRNVYVGGDKGGLAWLTRDVATGDLRYQQGWPASAFTTALKAVQHVSISEDDGYMVICGNKADPYGSLGIFSLDVDGTPSLLYQEEIPDIQHALFAPGSATDFYTIDQTNMELRLWSYSSADHGFSVQQAIA----LEGPSPDALAISPDGLNVYVHDSSSAKNFNFARDPATGLVGESPASTLQGDPNAVGSDGIGHWSSMAFSSSAPFAFALETLVGQVTVLSRAVGNGALAVLSKFPVAYDDGAAVACRADAPLLLASDDDVDLYVLGESRGQIGWLQFD---AATHALHANGWFVTGSRPRQLIADAAYEHVYATFAATNTXXXXXXXXXKWKGAHFNREPAVPPTPAPTTPQPTSATTYSVESQTLLLGESADTFNLMLIAV--------HKSVELAQAEEEKFILALQASPNDALAHNNYGHFLQHKRSNYAGAERHY 493          
BLAST of mRNA_E-siliculosus-1a_F_contig1186.1193.1 vs. uniprot
Match: A0A3B9HEV5_9CHLR (Uncharacterized protein (Fragment) n=1 Tax=Dehalococcoidia bacterium TaxID=2026734 RepID=A0A3B9HEV5_9CHLR)

HSP 1 Score: 73.6 bits (179), Expect = 9.200e-10
Identity = 66/229 (28.82%), Postives = 99/229 (43.23%), Query Frame = 0
Query:  158 SLTMTRAWAASDFD-----EALQSVEQIVVTPDGSKLITLGSRGLGRGTFGVFSISA-DGDLQLLQE--------------------DDHRGIIRAGFPDSSSRDLYAIDDDRSVLTHYTYDGSRFVVSQTVGGFTCLYG---LGVAPDGANVYVADDCLYTVTNFRRDPDTGSLTFQDELSGDPRNGDGLGCLKSLSFTEDGAWVVGLDSCDDVISILKRDLDTGTLT 357
            S T T A+     D     E L  V  I ++P GS L T G         GVFSI+   G L  ++                      D + +  AG+  +S    ++IDD   +L +  Y      +S    G T L+    L V PDG ++Y+      ++T F+R+P TGSL+    L  +    DGL    SL  T DG  +V   + DD+I++ +R+  TG+ T
Sbjct:  225 SATGTLAYIEHHIDNTAGVEGLDGVRDIRISPSGSHLYTAGFED---NAIGVFSINGTSGQLSFIRSYVNGLNGVHGIQGATAIAISPDGKHLYCAGWKGNSVA-AFSIDDTTGLLNYLGY------ISNEQHGITSLWSPSDLEVTPDGKHLYITAATSDSLTAFKREPSTGSLSLIGFLKDNTNGIDGLDWASSLEITSDGKHIVVTAAIDDMITVFRRNPSTGSFT 443          
BLAST of mRNA_E-siliculosus-1a_F_contig1186.1193.1 vs. uniprot
Match: A0A5N9ATB2_9CHLR (Uncharacterized protein (Fragment) n=1 Tax=SAR202 cluster bacterium TaxID=2030829 RepID=A0A5N9ATB2_9CHLR)

HSP 1 Score: 73.6 bits (179), Expect = 1.000e-9
Identity = 66/229 (28.82%), Postives = 99/229 (43.23%), Query Frame = 0
Query:  158 SLTMTRAWAASDFD-----EALQSVEQIVVTPDGSKLITLGSRGLGRGTFGVFSISA-DGDLQLLQE--------------------DDHRGIIRAGFPDSSSRDLYAIDDDRSVLTHYTYDGSRFVVSQTVGGFTCLYG---LGVAPDGANVYVADDCLYTVTNFRRDPDTGSLTFQDELSGDPRNGDGLGCLKSLSFTEDGAWVVGLDSCDDVISILKRDLDTGTLT 357
            S T T A+     D     E L  V  I ++P GS L T G         GVFSI+   G L  ++                      D + +  AG+  +S    ++IDD   +L +  Y      +S    G T L+    L V PDG ++Y+      ++T F+R+P TGSL+    L  +    DGL    SL  T DG  +V   + DD+I++ +R+  TG+ T
Sbjct:  529 SATGTLAYIEHHIDNTAGVEGLDGVRDIRISPSGSHLYTAGFED---NAIGVFSINGTSGQLSFIRSYVNGLNGVHGIQGATAIAISPDGKHLYCAGWKGNSVA-AFSIDDTTGLLNYLGY------ISNEQHGITSLWSPSDLEVTPDGKHLYITAATSDSLTAFKREPSTGSLSLIGFLKDNTNGIDGLDWASSLEITSDGKHIVVTAAIDDMITVFRRNPSTGSFT 747          
BLAST of mRNA_E-siliculosus-1a_F_contig1186.1193.1 vs. uniprot
Match: A0A382UKF5_9ZZZZ (Uncharacterized protein (Fragment) n=1 Tax=marine metagenome TaxID=408172 RepID=A0A382UKF5_9ZZZZ)

HSP 1 Score: 68.9 bits (167), Expect = 4.960e-9
Identity = 61/210 (29.05%), Postives = 90/210 (42.86%), Query Frame = 0
Query:  172 EALQSVEQIVVTPDGSKLITLGSRGLGRGTFGVFSISA---------------------DGDLQLLQEDDHRGIIRAGFPDSSSRDLYAIDDDRSVLTHYTYDGSRFVVSQTVGGFTCLYG---LGVAPDGANVYVADDCLYTVTNFRRDPDTGSLTFQDELSGDPRNGDGLGCLKSLSFTEDGAWVVGLDSCDDVISILKRDLDTGTLT 357
            E L  V  I ++P GS L T           GVFS++A                      G   +    D + +  AG+  +S    ++IDD   +LT+  Y      VS    G T L+    L V PDG ++YV      ++T FRRD  TGSL+    L  +    DGL    SL    DG  +V   + D+ +++ KR+  TG++T
Sbjct:   30 EGLDDVRDIRLSPSGSHLYTAAFE---ENAIGVFSVNATSGQLSFIGSHINGLDGVHGIQGATAIAISPDGQHLYCAGWKGNSIA-AFSIDDATGLLTYLGY------VSNEQYGVTSLWSPSDLEVTPDGKHLYVTAATSDSLTVFRRDSSTGSLSLIGFLKDNTNGIDGLDWASSLEIMSDGQHIVVTAAVDNTVTVFKRNSSTGSIT 229          
BLAST of mRNA_E-siliculosus-1a_F_contig1186.1193.1 vs. uniprot
Match: A7BT48_9GAMM (Uncharacterized protein n=1 Tax=Beggiatoa sp. PS TaxID=422289 RepID=A7BT48_9GAMM)

HSP 1 Score: 61.2 bits (147), Expect = 6.450e-6
Identity = 51/162 (31.48%), Postives = 78/162 (48.15%), Query Frame = 0
Query:  245 SVLTHYTYDGSRFVVSQTVGGFTCLYGLG------VAPDGANVYVADDCLYTVTNFRRDPDTGSLTFQDELSGDPRNGDGLGCLKSLSFTEDGAWVVGLDSCDDVISILKRDLDTGTLTPTTLINTDNPDGNTINIDKTWSALVVSDGLGDIYVADWSDSKI 400
            +V +  T +G+  ++   V G   + GL       V+ DG +VY       T+  F R  DTG LT  +    D +  DGLG +  ++ + DG +V    S D+ I+I +RD +TG LT   L+  D  DG  I+      A+ VS     IYVA + D+ +
Sbjct:   21 TVFSRDTTNGNLSLIQTLVDGTPGVTGLNRANSVVVSQDGKHVYTTASSNNTLVLFNRATDTGLLTLIEVYQDDVKGIDGLGGITDVAVSPDGRYVYASGSGDNAIAIFRRDANTGKLTFIDLLR-DGIDG--IDGLTQARAVTVSPQGDHIYVAGFGDNAV 179          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1186.1193.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D8LME0_ECTSI0.000e+099.18TPR repeat-containing protein n=1 Tax=Ectocarpus s... [more]
A0A835ZFA9_9STRA4.200e-4230.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A3B9HEV5_9CHLR9.200e-1028.82Uncharacterized protein (Fragment) n=1 Tax=Dehaloc... [more]
A0A5N9ATB2_9CHLR1.000e-928.82Uncharacterized protein (Fragment) n=1 Tax=SAR202 ... [more]
A0A382UKF5_9ZZZZ4.960e-929.05Uncharacterized protein (Fragment) n=1 Tax=marine ... [more]
A7BT48_9GAMM6.450e-631.48Uncharacterized protein n=1 Tax=Beggiatoa sp. PS T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006597Sel1-like repeatSMARTSM00671sel1coord: 630..662
e-value: 7.1
score: 15.0
coord: 560..592
e-value: 24.0
score: 10.4
coord: 525..557
e-value: 29.0
score: 9.6
coord: 595..627
e-value: 100.0
score: 4.8
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 525..559
e-value: 12.0
score: 14.2
coord: 560..594
e-value: 23.0
score: 11.8
coord: 630..664
e-value: 4.8
score: 16.1
coord: 595..629
e-value: 0.12
score: 21.5
NoneNo IPR availablePFAMPF13432TPR_16coord: 540..588
e-value: 4.5E-4
score: 20.8
coord: 610..664
e-value: 8.2E-7
score: 29.6
NoneNo IPR availablePANTHERPTHR44216FAMILY NOT NAMEDcoord: 540..666
coord: 482..590
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..66
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 67..87
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 474..498
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 499..686
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 88..473
NoneNo IPR availableSUPERFAMILY69322Tricorn protease domain 2coord: 109..447
NoneNo IPR availableTMHMMTMhelixcoord: 70..92
NoneNo IPR availableTMHMMTMhelixcoord: 476..498
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 271..389
e-value: 1.8E-7
score: 32.9
coord: 123..270
e-value: 7.2E-6
score: 27.7
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 501..572
e-value: 1.0E-12
score: 50.3
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 573..685
e-value: 1.3E-23
score: 85.1
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 514..669
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 512..664
score: 27.147

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1186contigE-siliculosus-1a_F_contig1186:24312..35542 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1186.1193.1mRNA_E-siliculosus-1a_F_contig1186.1193.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1186 24312..35542 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1186.1193.1 ID=prot_E-siliculosus-1a_F_contig1186.1193.1|Name=mRNA_E-siliculosus-1a_F_contig1186.1193.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=687bp
MHRRRRHCCLRRGKRKTHHQNMGAAAHGGSSSRISFAEGKGFIGPREEDL
PNVIRGRSKARMSRKNNSRVTVSATAVLGVLVGLLTAEGASAQQVGNLTA
LSRGYSVNLTGSSLNNPFDDTSFNPASAIGVSADGTGVYVGGELGGLIHL
ARSPEDGSLTMTRAWAASDFDEALQSVEQIVVTPDGSKLITLGSRGLGRG
TFGVFSISADGDLQLLQEDDHRGIIRAGFPDSSSRDLYAIDDDRSVLTHY
TYDGSRFVVSQTVGGFTCLYGLGVAPDGANVYVADDCLYTVTNFRRDPDT
GSLTFQDELSGDPRNGDGLGCLKSLSFTEDGAWVVGLDSCDDVISILKRD
LDTGTLTPTTLINTDNPDGNTINIDKTWSALVVSDGLGDIYVADWSDSKI
LWVRADFGVGGDGSVISTNWFSLSFKPSTLIASPDLQTVYVANKENDVWE
GGAYPRVAVPTPDSDGSGTSAVNVTLAVALSVSLVAAIVIAGVAAKFIQR
KRNISMYAGEEETLRAALEANPNDAVAHNNLGYLMETVYKDFAEAEAHYS
EALRINPRAAFAHNSLGHLLHHRQKDYDAAEEHYLKAINLHWRSPDAHYN
LGCLLQHHKGDVAEAEKQYRHAIKCDPKHGMAQYNLGWVLEKVKQDLKGA
EACYRAAIEADPEDKDAARRLTKVVAQMQAEEEGKH*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013026TPR-contain_dom
IPR011990TPR-like_helical_dom_sf
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR019734TPR_repeat
IPR006597Sel1-like