prot_E-siliculosus-1a_F_contig11848.1184.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig11848.1184.1
Unique Nameprot_E-siliculosus-1a_F_contig11848.1184.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length90
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig11848.1184.1 vs. uniprot
Match: D7FH45_ECTSI (ERCC4 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH45_ECTSI)

HSP 1 Score: 159 bits (402), Expect = 2.190e-43
Identity = 78/78 (100.00%), Postives = 78/78 (100.00%), Query Frame = 0
Query:   12 EDLVFEPLPSLHAVVFSYAQARESLNILQDLEPDFVVLYDPDAAFVRTLEAYQAGRPLDRPPLVVYFMLYEQSVEEQR 89
            EDLVFEPLPSLHAVVFSYAQARESLNILQDLEPDFVVLYDPDAAFVRTLEAYQAGRPLDRPPLVVYFMLYEQSVEEQR
Sbjct:  754 EDLVFEPLPSLHAVVFSYAQARESLNILQDLEPDFVVLYDPDAAFVRTLEAYQAGRPLDRPPLVVYFMLYEQSVEEQR 831          
BLAST of mRNA_E-siliculosus-1a_F_contig11848.1184.1 vs. uniprot
Match: A0A6H5JEA6_9PHAE (ERCC4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEA6_9PHAE)

HSP 1 Score: 154 bits (390), Expect = 9.100e-42
Identity = 76/78 (97.44%), Postives = 77/78 (98.72%), Query Frame = 0
Query:   12 EDLVFEPLPSLHAVVFSYAQARESLNILQDLEPDFVVLYDPDAAFVRTLEAYQAGRPLDRPPLVVYFMLYEQSVEEQR 89
            EDLVFEPLPSLHAVVFS+AQARESLNILQDLEPDFVVLYDPDAAFVRTLEAYQAGR LDRPPLVVYFMLYEQSVEEQR
Sbjct:  845 EDLVFEPLPSLHAVVFSFAQARESLNILQDLEPDFVVLYDPDAAFVRTLEAYQAGRTLDRPPLVVYFMLYEQSVEEQR 922          
BLAST of mRNA_E-siliculosus-1a_F_contig11848.1184.1 vs. uniprot
Match: A0A4D9D5Y9_9STRA (ERCC4 domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D5Y9_9STRA)

HSP 1 Score: 75.1 bits (183), Expect = 8.190e-14
Identity = 34/67 (50.75%), Postives = 50/67 (74.63%), Query Frame = 0
Query:   23 HAVVFSYAQARESLNILQDLEPDFVVLYDPDAAFVRTLEAYQAGRPLDRPPLVVYFMLYEQSVEEQR 89
            H ++ +Y+QA  ++ +++++ PD +VLYDPDA FVR +E +QA RP     L VYFM+YE+SVEEQR
Sbjct:  778 HVIMITYSQAYTNMKLIEEVYPDAIVLYDPDAQFVREVEVHQARRP-PTETLRVYFMVYEESVEEQR 843          
BLAST of mRNA_E-siliculosus-1a_F_contig11848.1184.1 vs. uniprot
Match: W7TM79_9STRA (Dna repair endonuclease xpf n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TM79_9STRA)

HSP 1 Score: 74.7 bits (182), Expect = 9.380e-14
Identity = 33/67 (49.25%), Postives = 50/67 (74.63%), Query Frame = 0
Query:   23 HAVVFSYAQARESLNILQDLEPDFVVLYDPDAAFVRTLEAYQAGRPLDRPPLVVYFMLYEQSVEEQR 89
            H ++ +Y+QA  ++ +++++ PD ++LYDPDA FVR +E +QA RP     L VYFM+YE+SVEEQR
Sbjct:  105 HVIMITYSQAYTNMKLIEEVYPDAIILYDPDAQFVREVEVHQARRP-PTETLRVYFMVYEESVEEQR 170          
BLAST of mRNA_E-siliculosus-1a_F_contig11848.1184.1 vs. uniprot
Match: A0A067CU23_SAPPC (ERCC4 domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CU23_SAPPC)

HSP 1 Score: 74.3 bits (181), Expect = 1.510e-13
Identity = 35/66 (53.03%), Postives = 46/66 (69.70%), Query Frame = 0
Query:   23 HAVVFSYAQARESLNILQDLEPDFVVLYDPDAAFVRTLEAYQAGRPLDRPPLVVYFMLYEQSVEEQ 88
            H V+ +YAQA+    +L DL+P+ VVLYDPD AF+R LE Y A    D  PL VYFM+Y++S E+Q
Sbjct:  499 HLVICTYAQAKRCATLLHDLQPEHVVLYDPDVAFIRELEVYHAHYADD--PLSVYFMVYDESAEQQ 562          
BLAST of mRNA_E-siliculosus-1a_F_contig11848.1184.1 vs. uniprot
Match: A0A7S0KJP7_9CHLO (Hypothetical protein n=2 Tax=Ostreococcus mediterraneus TaxID=1486918 RepID=A0A7S0KJP7_9CHLO)

HSP 1 Score: 71.2 bits (173), Expect = 1.840e-12
Identity = 34/64 (53.12%), Postives = 46/64 (71.88%), Query Frame = 0
Query:   26 VFSYAQARESLNILQDLEPDFVVLYDPDAAFVRTLEAYQAGRPLDRPPLVVYFMLYEQSVEEQR 89
            +F YA  R  +N+L  ++P FVV+YDPDAAF+R LE Y+A  P    PL VYFM+Y+ S+EEQ+
Sbjct:  651 IFVYAHERR-VNVLNHIQPSFVVMYDPDAAFIRELEVYKAQHP--DAPLKVYFMVYDTSLEEQK 711          
BLAST of mRNA_E-siliculosus-1a_F_contig11848.1184.1 vs. uniprot
Match: A0A1W0A3H2_9STRA (DNA repair endonuclease XPF n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A3H2_9STRA)

HSP 1 Score: 70.1 bits (170), Expect = 4.650e-12
Identity = 33/64 (51.56%), Postives = 47/64 (73.44%), Query Frame = 0
Query:   25 VVFSYAQARESLNILQDLEPDFVVLYDPDAAFVRTLEAYQAGRPLDRPPLVVYFMLYEQSVEEQ 88
            V+ +YAQ ++  ++L+DL+P+ V+LYDPD AF+R LE Y A    D  PL VYFM+YE+S E+Q
Sbjct:  498 VICTYAQGKKCGSLLEDLQPEHVILYDPDVAFIRELEIYHARYYED--PLNVYFMVYEESAEQQ 559          
BLAST of mRNA_E-siliculosus-1a_F_contig11848.1184.1 vs. uniprot
Match: A4S158_OSTLU (ERCC4 domain-containing protein n=2 Tax=Ostreococcus sp. 'lucimarinus' TaxID=242159 RepID=A4S158_OSTLU)

HSP 1 Score: 69.7 bits (169), Expect = 6.400e-12
Identity = 33/64 (51.56%), Postives = 48/64 (75.00%), Query Frame = 0
Query:   26 VFSYAQARESLNILQDLEPDFVVLYDPDAAFVRTLEAYQAGRPLDRPPLVVYFMLYEQSVEEQR 89
            ++ YA  R+ LN+L  ++P FVV+YDPDA+F+R LE YQA RP    P+ VYF++Y+ S+EEQ+
Sbjct:  610 MYVYAHERK-LNLLNRIQPSFVVMYDPDASFIRELEVYQATRP--DVPVKVYFLVYDTSLEEQK 670          
BLAST of mRNA_E-siliculosus-1a_F_contig11848.1184.1 vs. uniprot
Match: Q013S3_OSTTA (Restriction endonuclease type II-like n=2 Tax=Ostreococcus tauri TaxID=70448 RepID=Q013S3_OSTTA)

HSP 1 Score: 68.9 bits (167), Expect = 1.190e-11
Identity = 34/64 (53.12%), Postives = 45/64 (70.31%), Query Frame = 0
Query:   26 VFSYAQARESLNILQDLEPDFVVLYDPDAAFVRTLEAYQAGRPLDRPPLVVYFMLYEQSVEEQR 89
            +F YA  R+ LN+L  + P FVV+YDPDAAF+R LE YQA  P     + VYFM+Y+ S+EEQ+
Sbjct:  622 IFVYAHERK-LNLLNRIRPSFVVMYDPDAAFIRELEVYQAQHP--EVTVKVYFMVYDTSLEEQK 682          
BLAST of mRNA_E-siliculosus-1a_F_contig11848.1184.1 vs. uniprot
Match: A0A168J231_MUCCL (ERCC4 domain-containing protein n=4 Tax=Mucor TaxID=4830 RepID=A0A168J231_MUCCL)

HSP 1 Score: 67.4 bits (163), Expect = 4.140e-11
Identity = 33/73 (45.21%), Postives = 45/73 (61.64%), Query Frame = 0
Query:   16 FEPLPSLHAVVFSYAQARESLNILQDLEPDFVVLYDPDAAFVRTLEAYQAGRPLDRPPLVVYFMLYEQSVEEQ 88
            FE +PS   +     +   +  +LQD +P F++LYDP+ AFVR +E Y+A  P     + VYFMLYE SVEEQ
Sbjct:  553 FEEIPSTSLITIQCYEDDANEQVLQDAQPRFIILYDPNPAFVRQIEVYRAQHPT--VDIRVYFMLYENSVEEQ 623          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig11848.1184.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FH45_ECTSI2.190e-43100.00ERCC4 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5JEA6_9PHAE9.100e-4297.44ERCC4 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A4D9D5Y9_9STRA8.190e-1450.75ERCC4 domain-containing protein n=1 Tax=Nannochlor... [more]
W7TM79_9STRA9.380e-1449.25Dna repair endonuclease xpf n=1 Tax=Nannochloropsi... [more]
A0A067CU23_SAPPC1.510e-1353.03ERCC4 domain-containing protein n=2 Tax=Saprolegni... [more]
A0A7S0KJP7_9CHLO1.840e-1253.13Hypothetical protein n=2 Tax=Ostreococcus mediterr... [more]
A0A1W0A3H2_9STRA4.650e-1251.56DNA repair endonuclease XPF n=1 Tax=Thraustotheca ... [more]
A4S158_OSTLU6.400e-1251.56ERCC4 domain-containing protein n=2 Tax=Ostreococc... [more]
Q013S3_OSTTA1.190e-1153.13Restriction endonuclease type II-like n=2 Tax=Ostr... [more]
A0A168J231_MUCCL4.140e-1145.21ERCC4 domain-containing protein n=4 Tax=Mucor TaxI... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR10150DNA REPAIR ENDONUCLEASE XPFcoord: 20..89

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig11848contigE-siliculosus-1a_F_contig11848:314..1432 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig11848.1184.1mRNA_E-siliculosus-1a_F_contig11848.1184.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig11848 314..1432 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig11848.1184.1 ID=prot_E-siliculosus-1a_F_contig11848.1184.1|Name=mRNA_E-siliculosus-1a_F_contig11848.1184.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=90bp
GGGGGGGGGGGEDLVFEPLPSLHAVVFSYAQARESLNILQDLEPDFVVLY
DPDAAFVRTLEAYQAGRPLDRPPLVVYFMLYEQSVEEQR*
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