prot_E-siliculosus-1a_F_contig11808.1169.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig11808.1169.1
Unique Nameprot_E-siliculosus-1a_F_contig11808.1169.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length173
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig11808.1169.1 vs. uniprot
Match: D7FTY3_ECTSI (S5 DRBM domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTY3_ECTSI)

HSP 1 Score: 343 bits (880), Expect = 1.770e-116
Identity = 173/175 (98.86%), Postives = 173/175 (98.86%), Query Frame = 0 
Query:    1 QTDGPAPPKKKK--TVEMAQGQWAEILVHTDRVTKTVKGGMEIQYRALVTVGNLHGVGGFAIGKADTPAVAITEASRKAKLLHNLVYVERYKQASLCQDLVGKHNGSKVYIWSRPPGSGMRAGKLSRDILYNMGITDGACKIIGRRNKYSMIYAMFDALAKHRGIESIARGRGKR 173
            QTDGPAPPKKKK  TVEMAQGQWAEILVHTDRVTKTVKGGMEIQYRALVTVGNLHGVGGFAIGKADTPAVAITEASRKAKLLHNLVYVERYKQASLCQDLVGKHNGSKVYIWSRPPGSGMRAGKLSRDILYNMGITDGACKIIGRRNKYSMIYAMFDALAKHRGIESIARGRGKR
Sbjct:  183 QTDGPAPPKKKKKKTVEMAQGQWAEILVHTDRVTKTVKGGMEIQYRALVTVGNLHGVGGFAIGKADTPAVAITEASRKAKLLHNLVYVERYKQASLCQDLVGKHNGSKVYIWSRPPGSGMRAGKLSRDILYNMGITDGACKIIGRRNKYSMIYAMFDALAKHRGIESIARGRGKR 357
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BLAST of mRNA_E-siliculosus-1a_F_contig11808.1169.1 vs. uniprot
Match: D7FTY0_ECTSI (S5 DRBM domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTY0_ECTSI)

HSP 1 Score: 326 bits (836), Expect = 8.930e-111
Identity = 166/173 (95.95%), Postives = 166/173 (95.95%), Query Frame = 0 
Query:    1 QTDGPAPPKKKKTVEMAQGQWAEILVHTDRVTKTVKGGMEIQYRALVTVGNLHGVGGFAIGKADTPAVAITEASRKAKLLHNLVYVERYKQASLCQDLVGKHNGSKVYIWSRPPGSGMRAGKLSRDILYNMGITDGACKIIGRRNKYSMIYAMFDALAKHRGIESIARGRGKR 173
            QTDGPAPPKKKKTVEMAQGQWAEILVHTDRVTKTVKGGMEIQYRALVTVGNLHGVGGFAIGKADTPAVAITEASRKAKLLHNLVYVERYKQASLCQDLVGKHNGSKVYIWSR       AGKLSRDILYNMGITDGACKIIGRRNKYSMIYAMFDALAKHRGIESIARGRGKR
Sbjct:  124 QTDGPAPPKKKKTVEMAQGQWAEILVHTDRVTKTVKGGMEIQYRALVTVGNLHGVGGFAIGKADTPAVAITEASRKAKLLHNLVYVERYKQASLCQDLVGKHNGSKVYIWSR-------AGKLSRDILYNMGITDGACKIIGRRNKYSMIYAMFDALAKHRGIESIARGRGKR 289
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BLAST of mRNA_E-siliculosus-1a_F_contig11808.1169.1 vs. uniprot
Match: A0A6H5LA05_9PHAE (S5 DRBM domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LA05_9PHAE)

HSP 1 Score: 249 bits (635), Expect = 2.030e-82
Identity = 122/122 (100.00%), Postives = 122/122 (100.00%), Query Frame = 0 
Query:   16 MAQGQWAEILVHTDRVTKTVKGGMEIQYRALVTVGNLHGVGGFAIGKADTPAVAITEASRKAKLLHNLVYVERYKQASLCQDLVGKHNGSKVYIWSRPPGSGMRAGKLSRDILYNMGITDGA 137
            MAQGQWAEILVHTDRVTKTVKGGMEIQYRALVTVGNLHGVGGFAIGKADTPAVAITEASRKAKLLHNLVYVERYKQASLCQDLVGKHNGSKVYIWSRPPGSGMRAGKLSRDILYNMGITDGA
Sbjct:    1 MAQGQWAEILVHTDRVTKTVKGGMEIQYRALVTVGNLHGVGGFAIGKADTPAVAITEASRKAKLLHNLVYVERYKQASLCQDLVGKHNGSKVYIWSRPPGSGMRAGKLSRDILYNMGITDGA 122
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BLAST of mRNA_E-siliculosus-1a_F_contig11808.1169.1 vs. uniprot
Match: A0A448Z056_9STRA (S5 DRBM domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z056_9STRA)

HSP 1 Score: 124 bits (310), Expect = 2.080e-30
Identity = 68/159 (42.77%), Postives = 96/159 (60.38%), Query Frame = 0 
Query:   15 EMAQGQWAEILVHTDRVTKTVKGGMEIQYRALVTVGNLHGVGGFAIGKADTPAVAITEASRKAKLLHNLVYVERYKQASLCQDLVGKHNGSKVYIWSRPPGSGMRAGKLSRDILYNMGITDGACKIIGRRNKYSMIYAMFDALAKHRGIESIARGRGKR 173
            ++A G+W E+L+ TDRV+K  +GG  + +RALV  GNL G  GF IGKA  P  A+  A R AK   N+ +V+RY+  +L +DLVG+ N  KV +  R   +G+R   L  +IL  MGIT+   K  G RN Y+++ A F AL  H  ++ +A  RG R
Sbjct:  266 QLAHGEWGEMLIRTDRVSKMWRGGRVVSFRALVIGGNLRGCAGFGIGKAFEPEDAVEIACRMAK--RNIFFVDRYRGRTLTRDLVGRQNSCKVVL--RTTTNGLRGNPLCCEILKLMGITNVVAKAHGSRNHYNVVRATFKALMTHESLDEVALKRGLR 420
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BLAST of mRNA_E-siliculosus-1a_F_contig11808.1169.1 vs. uniprot
Match: A0A7S0YAY2_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0YAY2_9STRA)

HSP 1 Score: 123 bits (309), Expect = 3.850e-30
Identity = 68/159 (42.77%), Postives = 96/159 (60.38%), Query Frame = 0 
Query:   15 EMAQGQWAEILVHTDRVTKTVKGGMEIQYRALVTVGNLHGVGGFAIGKADTPAVAITEASRKAKLLHNLVYVERYKQASLCQDLVGKHNGSKVYIWSRPPGSGMRAGKLSRDILYNMGITDGACKIIGRRNKYSMIYAMFDALAKHRGIESIARGRGKR 173
            ++A G W E+L+ TDRV+K  +GG  + +RALV  GNL G GGF IGK+  P  A+  A R AK   N+ +V+RY+  +L +DLVG+ N  KV +  RP  +G+R   L  +IL  MGIT+   K  G RN  +++ A + AL  H  ++ IA  RG R
Sbjct:  289 QLAHGDWGEMLIRTDRVSKMWRGGRVVSFRALVIGGNLRGCGGFGIGKSFEPEDAVEIACRMAK--RNIFFVDRYRGRTLTRDLVGRQNSCKVVL--RPTTNGLRGNPLCCEILKLMGITNVVAKAHGSRNHSNVVRATYKALMTHESLDEIAMKRGLR 443
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BLAST of mRNA_E-siliculosus-1a_F_contig11808.1169.1 vs. uniprot
Match: A0A7G8ZJN6_9PROT (30S ribosomal protein S5 n=3 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A7G8ZJN6_9PROT)

HSP 1 Score: 101 bits (252), Expect = 8.030e-24
Identity = 62/154 (40.26%), Postives = 84/154 (54.55%), Query Frame = 0 
Query:   18 QGQWAEILVHTDRVTKTVKGGMEIQYRALVTVGNLHGVGGFAIGKADTPAVAITEASRKAKLLHNLVYVERYKQASLCQDLVGKHNGSKVYIWSRPPGSGMRAGKLSRDILYNMGITDGACKIIGRRNKYSMIYAMFDALAKHRGIESIARGRG 171
            Q +  + LVH +RV KTVKGG   Q+ ALV VG+  G  GF  GKA     AI +A+ +AK    +V +   +  +L  D  G+H   KV + + PPG+G+ AG   R +L  +G+ D   K  G  N Y+MI A FDAL   +   SIA  RG
Sbjct:   21 QDEIVDKLVHINRVAKTVKGGRNFQFAALVVVGDQKGRVGFGQGKAREVPEAIRKATEEAK--KTMVRIPLREGRTLHHDSPGRHGAGKVILRAAPPGTGVIAGGPMRAVLETLGVQDVVAKSTGTSNPYNMIRATFDALKHQKSPRSIAAKRG 172
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BLAST of mRNA_E-siliculosus-1a_F_contig11808.1169.1 vs. uniprot
Match: A0A420WMI4_9PROT (30S ribosomal protein S5 n=4 Tax=Robiginitomaculaceae TaxID=2800062 RepID=A0A420WMI4_9PROT)

HSP 1 Score: 101 bits (251), Expect = 1.000e-23
Identity = 61/165 (36.97%), Postives = 91/165 (55.15%), Query Frame = 0 
Query:    9 KKKKTVEMAQGQWAEILVHTDRVTKTVKGGMEIQYRALVTVGNLHGVGGFAIGKADTPAVAITEASRKAKLLHNLVYVERYKQASLCQDLVGKHNGSKVYIWSRPPGSGMRAGKLSRDILYNMGITDGACKIIGRRNKYSMIYAMFDALAKHRGIESIARGRGKR 173
            ++ K  E    ++ + LVH +RV KTVKGG  + + ALV VG+  G  GF  GKA     AI +A+ +AK    ++ V   +  +L  D+ G+H   K+ + S PPG+G+ AG   R +L  +G+ D   K +G  N Y+M+ A FDAL +      IA  RGK+
Sbjct:    7 RRNKRDEEQDNEFIDRLVHINRVAKTVKGGRNMSFAALVIVGDEKGRVGFGKGKAREVPEAIRKATEEAK--KTMIRVPLREGRTLHHDVRGRHGAGKIVMRSAPPGTGVIAGGPMRAVLECLGVQDVVGKSVGTSNPYNMVRATFDALKRMESPRMIANKRGKK 169
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BLAST of mRNA_E-siliculosus-1a_F_contig11808.1169.1 vs. uniprot
Match: A0A848V710_9PROT (30S ribosomal protein S5 n=1 Tax=Hellea sp. TaxID=2715692 RepID=A0A848V710_9PROT)

HSP 1 Score: 100 bits (250), Expect = 1.410e-23
Identity = 59/154 (38.31%), Postives = 88/154 (57.14%), Query Frame = 0 
Query:   20 QWAEILVHTDRVTKTVKGGMEIQYRALVTVGNLHGVGGFAIGKADTPAVAITEASRKAKLLHNLVYVERYKQASLCQDLVGKHNGSKVYIWSRPPGSGMRAGKLSRDILYNMGITDGACKIIGRRNKYSMIYAMFDALAKHRGIESIARGRGKR 173
            ++ + LVH +RV KTVKGG  + + ALV VG+  G  GF  GKA     AI +A+ +AK    ++ V   +  +L  DL G+H   K+ + + PPG+G+ AG   R +L  +G+ D   K +G  N Y+M+ A FDAL +     +IA  RGK+
Sbjct:   16 EFIDRLVHINRVAKTVKGGRNMSFAALVVVGDEKGRVGFGKGKAREVPEAIRKATEEAK--RTMIRVPLREGRTLHHDLKGRHGAGKIVMRAAPPGTGVIAGGPMRAVLECLGVQDVVGKSVGTSNPYNMVRATFDALKRAESPRTIAAKRGKK 167
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BLAST of mRNA_E-siliculosus-1a_F_contig11808.1169.1 vs. uniprot
Match: A0A3C2E554_9PROT (30S ribosomal protein S5 n=3 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A3C2E554_9PROT)

HSP 1 Score: 99.8 bits (247), Expect = 4.800e-23
Identity = 63/157 (40.13%), Postives = 84/157 (53.50%), Query Frame = 0 
Query:   15 EMAQGQWAEILVHTDRVTKTVKGGMEIQYRALVTVGNLHGVGGFAIGKADTPAVAITEASRKAKLLHNLVYVERYKQASLCQDLVGKHNGSKVYIWSRPPGSGMRAGKLSRDILYNMGITDGACKIIGRRNKYSMIYAMFDALAKHRGIESIARGRG 171
            E    ++ + LVH +RV KTVKGG   Q+ ALV VG+  G  GF  GKA     AI +A+ +AK   +L+ V   +  +L QD  G H   KV + + PPG+G+ AG   R +L  +G+ D   K  G  N Y+MI A FDAL        IA  RG
Sbjct:   20 EEQSDEFVDKLVHINRVAKTVKGGRNFQFAALVIVGDQKGRVGFGQGKAREVPEAIRKATDEAK--KSLIRVPLREGRTLHQDSRGHHGAGKVVLRAAPPGTGVIAGGPMRAVLETLGVQDVVAKSTGTSNPYNMIRATFDALKHQHSPRHIAAKRG 174
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BLAST of mRNA_E-siliculosus-1a_F_contig11808.1169.1 vs. uniprot
Match: RS5_MARMM (30S ribosomal protein S5 n=8 Tax=Maricaulis TaxID=74317 RepID=RS5_MARMM)

HSP 1 Score: 99.4 bits (246), Expect = 7.440e-23
Identity = 61/147 (41.50%), Postives = 81/147 (55.10%), Query Frame = 0 
Query:   25 LVHTDRVTKTVKGGMEIQYRALVTVGNLHGVGGFAIGKADTPAVAITEASRKAKLLHNLVYVERYKQASLCQDLVGKHNGSKVYIWSRPPGSGMRAGKLSRDILYNMGITDGACKIIGRRNKYSMIYAMFDALAKHRGIESIARGRG 171
            LVH +RV KTVKGG   Q+ ALV VG+  G  GF  GKA     AI +A+ +AK   N++ V   +  +L  D  G+H   KV + + PPG+G+ AG   R +L  +GI D   K +G  N Y+MI A  DAL       S+A  RG
Sbjct:   35 LVHINRVAKTVKGGRNFQFAALVVVGDTKGRVGFGQGKAREVPEAIRKATDEAK--KNMIRVPLREGRTLHHDGKGRHGAGKVVLRAAPPGTGVIAGGPMRAVLETLGIQDVVAKSVGTSNPYNMIRATMDALKLQSSPRSVAAKRG 179
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig11808.1169.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FTY3_ECTSI1.770e-11698.86S5 DRBM domain-containing protein n=1 Tax=Ectocarp... [more]
D7FTY0_ECTSI8.930e-11195.95S5 DRBM domain-containing protein n=2 Tax=Ectocarp... [more]
A0A6H5LA05_9PHAE2.030e-82100.00S5 DRBM domain-containing protein n=1 Tax=Ectocarp... [more]
A0A448Z056_9STRA2.080e-3042.77S5 DRBM domain-containing protein n=1 Tax=Pseudo-n... [more]
A0A7S0YAY2_9STRA3.850e-3042.77Hypothetical protein n=1 Tax=Pseudo-nitzschia deli... [more]
A0A7G8ZJN6_9PROT8.030e-2440.2630S ribosomal protein S5 n=3 Tax=Alphaproteobacter... [more]
A0A420WMI4_9PROT1.000e-2336.9730S ribosomal protein S5 n=4 Tax=Robiginitomaculac... [more]
A0A848V710_9PROT1.410e-2338.3130S ribosomal protein S5 n=1 Tax=Hellea sp. TaxID=... [more]
A0A3C2E554_9PROT4.800e-2340.1330S ribosomal protein S5 n=3 Tax=Alphaproteobacter... [more]
RS5_MARMM7.440e-2341.5030S ribosomal protein S5 n=8 Tax=Maricaulis TaxID=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.160.20coord: 12..84
e-value: 9.3E-17
score: 62.8
NoneNo IPR availablePANTHERPTHR13718:SF9128S RIBOSOMAL PROTEIN S5, MITOCHONDRIALcoord: 27..167
NoneNo IPR availableSUPERFAMILY54768dsRNA-binding domain-likecoord: 21..89
IPR005324Ribosomal protein S5, C-terminalPFAMPF03719Ribosomal_S5_Ccoord: 100..170
e-value: 1.0E-19
score: 69.8
IPR014721Ribosomal protein S5 domain 2-type fold, subgroupGENE3D3.30.230.10coord: 89..173
e-value: 1.2E-17
score: 65.2
IPR013810Ribosomal protein S5, N-terminalPFAMPF00333Ribosomal_S5coord: 21..87
e-value: 5.2E-20
score: 71.2
IPR013810Ribosomal protein S5, N-terminalPROSITEPS50881S5_DSRBDcoord: 21..84
score: 14.033
IPR000851Ribosomal protein S5PANTHERPTHR13718RIBOSOMAL S SUBUNITcoord: 27..167
IPR020568Ribosomal protein S5 domain 2-type foldSUPERFAMILY54211Ribosomal protein S5 domain 2-likecoord: 93..172

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig11808contigE-siliculosus-1a_F_contig11808:3..1696 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig11808.1169.1mRNA_E-siliculosus-1a_F_contig11808.1169.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig11808 3..1696 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig11808.1169.1 ID=prot_E-siliculosus-1a_F_contig11808.1169.1|Name=mRNA_E-siliculosus-1a_F_contig11808.1169.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=173bp
QTDGPAPPKKKKTVEMAQGQWAEILVHTDRVTKTVKGGMEIQYRALVTVG
NLHGVGGFAIGKADTPAVAITEASRKAKLLHNLVYVERYKQASLCQDLVG
KHNGSKVYIWSRPPGSGMRAGKLSRDILYNMGITDGACKIIGRRNKYSMI
YAMFDALAKHRGIESIARGRGKR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR020568Ribosomal_S5_D2-typ_fold
IPR000851Ribosomal_S5
IPR013810Ribosomal_S5_N
IPR014721Ribosomal_S5_D2-typ_fold_subgr
IPR005324Ribosomal_S5_C