prot_E-siliculosus-1a_F_contig11797.1153.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig11797.1153.1
Unique Nameprot_E-siliculosus-1a_F_contig11797.1153.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length266
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig11797.1153.1 vs. uniprot
Match: D1J709_ECTSI (Chloroplast 30S ribosomal protein S1 n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D1J709_ECTSI)

HSP 1 Score: 499 bits (1285), Expect = 4.320e-178
Identity = 256/265 (96.60%), Postives = 262/265 (98.87%), Query Frame = 0
Query:    1 MLLSIATSKFDFNKFGLILSQYSYKVKTNDILAGMVIGVESNYVLVDLGLEQVCFLPLKEISRFPIYNPTELLNINYVGEFLILDIKKKSNRIIISMKRVQSIYLWNRLRQIDFKNITIYAKLEESLMKGKLILFNGLFFFALNINIPKYYLRTNNKNLFMPFKFLEVKDSFHIAQMSSKLAIFSKINKNLVIGPIYLANVTAIKYFGVFVNILGVNCLLHISEIFKKTTQTENLSSLYKLGDQIKLKIISKDIERGRVSVALQN 265
            MLLSIATSKFDFNKFGLILSQYSYKVKTNDILAG++IGVESNYVLVDLGLEQVCFLPLKEISRFPIYNPTELLN+NYVGEFLILDI KKSNRIIISMKRVQSIYLWNRLRQIDFKNITIYAK EESLMKGKLILFNGLFFFALNINIPKYYLRTNNKNLFMPFKFLEVKDSFHIAQMSSKLAIFSKINKNLVIGP YLANVT+IKYFGVFVNILGVNCLLHISEIFKKTTQTENLSSLYKLGDQIKL+I+SKDIERGRVSVALQN
Sbjct:    1 MLLSIATSKFDFNKFGLILSQYSYKVKTNDILAGIIIGVESNYVLVDLGLEQVCFLPLKEISRFPIYNPTELLNVNYVGEFLILDINKKSNRIIISMKRVQSIYLWNRLRQIDFKNITIYAKFEESLMKGKLILFNGLFFFALNINIPKYYLRTNNKNLFMPFKFLEVKDSFHIAQMSSKLAIFSKINKNLVIGPSYLANVTSIKYFGVFVNILGVNCLLHISEIFKKTTQTENLSSLYKLGDQIKLRIVSKDIERGRVSVALQN 265          
BLAST of mRNA_E-siliculosus-1a_F_contig11797.1153.1 vs. uniprot
Match: A0A5A4MJF2_9PHAE (30S ribosomal protein S1 n=5 Tax=Scytosiphonaceae TaxID=2891 RepID=A0A5A4MJF2_9PHAE)

HSP 1 Score: 424 bits (1090), Expect = 2.300e-148
Identity = 216/265 (81.51%), Postives = 238/265 (89.81%), Query Frame = 0
Query:    1 MLLSIATSKFDFNKFGLILSQYSYKVKTNDILAGMVIGVESNYVLVDLGLEQVCFLPLKEIS-RFPIYNPTELLNINYVGEFLILDIKKKSNRIIISMKRVQSIYLWNRLRQIDFKNITIYAKLEESLMKGKLILFNGLFFFALNINIPKYYLRTNNKNLFMPFKFLEVKDSFHIAQMSSKLAIFSKINKNLVIGPIYLANVTAIKYFGVFVNILGVNCLLHISEIFKKTTQTENLSSLYKLGDQIKLKIISKDIERGRVSVALQ 264
            MLL I TSKFDFNKFGLILS+YSYKVKT+DILAG++IG+ESNY LVDLGLEQVCFLPLKEIS   PI  P +LLN+N +GEFLILDI + SNRI++SMKRVQSIYLWNRLRQIDF NITIYAK  +SL KGKLI+FNGL FF LNINIPKYYLR  NKNLFMPFKFLEVKD FHIA +SSKLA+F+K+NKNLV GP YL NVT+IKYFGVFVNILGVNCLLHISEIFKK  +T+NLSSLYKLGDQI+LKIISKDIERGRVSVAL+
Sbjct:    1 MLLYIVTSKFDFNKFGLILSKYSYKVKTDDILAGIIIGIESNYALVDLGLEQVCFLPLKEISISSPISGPIDLLNVNSIGEFLILDINQNSNRIMVSMKRVQSIYLWNRLRQIDFSNITIYAKFNKSLPKGKLIIFNGLLFFVLNINIPKYYLRAKNKNLFMPFKFLEVKDYFHIAHISSKLAVFNKVNKNLVSGPTYLGNVTSIKYFGVFVNILGVNCLLHISEIFKKKNETQNLSSLYKLGDQIRLKIISKDIERGRVSVALE 265          
BLAST of mRNA_E-siliculosus-1a_F_contig11797.1153.1 vs. uniprot
Match: A0A6B7EVE1_9PHAE (30S ribosomal protein S1 n=1 Tax=Cladosiphon okamuranus TaxID=309737 RepID=A0A6B7EVE1_9PHAE)

HSP 1 Score: 419 bits (1077), Expect = 2.200e-146
Identity = 210/265 (79.25%), Postives = 237/265 (89.43%), Query Frame = 0
Query:    1 MLLSIATSKFDFNKFGLILSQYSYKVKTNDILAGMVIGVESNYVLVDLGLEQVCFLPLKEISRFPIYNPTELLNINYVGEFLILDIKKKSNRIIISMKRVQSIYLWNRLRQIDFKNITIYAKLEESLMKGKLILFNGLFFFALNINIPKYYLRTNNKNLFMPFKFLEVKDSFHIAQMSSKLAIFSKINKNLVIGPIYLANVTAIKYFGVFVNILGVNCLLHISEIFKKTTQTENLSSLYKLGDQIKLKIISKDIERGRVSVALQN 265
            MLLSI TSKFDFNKFGLILS+YSYK+KTNDILAG+V+GVESNYVLVD+GL+QVCFLPLKEIS  PI    +LLNINY+GEFLIL+I K SNRII+SMKRVQSIYLWNRLRQIDFKNITIYAK  ESL KGKLI F+ L FF LNINIPKYYL+ NN  LF+PFKFLE+KDSFHIA +SSKLA+F+K+N+NLVIGP YL NVT+IKYFGVF+NILG+NCLLHISEIF+K  QT+N+SS YKLGDQI LKIISKD+ERGRV VAL +
Sbjct:    1 MLLSITTSKFDFNKFGLILSKYSYKIKTNDILAGIVVGVESNYVLVDVGLDQVCFLPLKEISISPITKKIDLLNINYIGEFLILNINKNSNRIIVSMKRVQSIYLWNRLRQIDFKNITIYAKFGESLGKGKLITFDSLSFFVLNINIPKYYLKLNNNKLFIPFKFLEIKDSFHIAHISSKLAVFNKVNRNLVIGPTYLGNVTSIKYFGVFINILGINCLLHISEIFQKNEQTQNISSFYKLGDQIPLKIISKDLERGRVLVALDS 265          
BLAST of mRNA_E-siliculosus-1a_F_contig11797.1153.1 vs. uniprot
Match: A0A1I9LVS8_9PHAE (30S ribosomal protein S1 n=1 Tax=Pleurocladia lacustris TaxID=246121 RepID=A0A1I9LVS8_9PHAE)

HSP 1 Score: 408 bits (1048), Expect = 5.530e-142
Identity = 205/265 (77.36%), Postives = 231/265 (87.17%), Query Frame = 0
Query:    1 MLLSIATSKFDFNKFGLILSQYSYKVKTNDILAGMVIGVESNYVLVDLGLEQVCFLPLKEISRFPIYNPTELLNINYVGEFLILDIKKKSNRIIISMKRVQSIYLWNRLRQIDFKNITIYAKLEESLMKGKLILFNGLFFFALNINIPKYYLRTNNKNLFMPFKFLEVKDSFHIAQMSSKLAIFSKINKNLVIGPIYLANVTAIKYFGVFVNILGVNCLLHISEIFKKTTQTENLSSLYKLGDQIKLKIISKDIERGRVSVALQN 265
            ML+ +  SKFDFNKFGLILS+YSYKVKTNDILAG++I VESNY LVDLGLE+VCFLP  EIS   I +P++LL +NY+GEFLILD+   SNRII+S+K VQSIYLWNRLRQIDF N+TIYAK E +L+KGKLI FNGLFFF LNI+IPKYY R NNKNLF+PFKFLE+KDSFHI  +SSKLAIF+KINKNLVIGPIYL  V +IKYFGVFVNILG+NCLLHISEI KK  QTENLSSLYK GDQI LKIISKDIERGR+SVAL +
Sbjct:    1 MLICVVVSKFDFNKFGLILSKYSYKVKTNDILAGIIIAVESNYALVDLGLEKVCFLPFDEISISTISDPSDLLKLNYIGEFLILDMNNNSNRIIVSIKGVQSIYLWNRLRQIDFANLTIYAKFERNLIKGKLINFNGLFFFVLNIHIPKYYQRVNNKNLFIPFKFLEIKDSFHIGHVSSKLAIFNKINKNLVIGPIYLGTVISIKYFGVFVNILGINCLLHISEILKKNIQTENLSSLYKRGDQINLKIISKDIERGRISVALSS 265          
BLAST of mRNA_E-siliculosus-1a_F_contig11797.1153.1 vs. uniprot
Match: A0A0R6M9B1_UNDPI (30S ribosomal protein S1 n=11 Tax=Laminariales TaxID=2886 RepID=A0A0R6M9B1_UNDPI)

HSP 1 Score: 389 bits (1000), Expect = 1.120e-134
Identity = 191/265 (72.08%), Postives = 229/265 (86.42%), Query Frame = 0
Query:    1 MLLSIATSKFDFNKFGLILSQYSYKVKTNDILAGMVIGVESNYVLVDLGLEQVCFLPLKEISRFPIYNPTELLNINYVGEFLILDIKKKSNRIIISMKRVQSIYLWNRLRQIDFKNITIYAKLEESLMKGKLILFNGLFFFALNINIPKYYLRTNNKNLFMPFKFLEVKDSFHIAQMSSKLAIFSKINKNLVIGPIYLANVTAIKYFGVFVNILGVNCLLHISEIFKKTTQTENLSSLYKLGDQIKLKIISKDIERGRVSVALQN 265
            M L   TSKFDFNKFGLILS+YSY++K NDILAG++IGVESNY LVDLGLEQ+CFLPLKEIS +P  +P+ELLN N+VGEFLILDI    NRII+S+KR++SIYLWNRLRQIDF N+TIYAK+E+ L KGKL++FNGL FF LN NIPKYYLRTNNKNLFMPFKFLE+KD FHIA +SSKLAIFSK+NKNL IG IY+ N+T+IK FG+F+N+LG+ C LH SEI +K ++T NL+SLYKLGDQI +KII KD ERGR+S+ L++
Sbjct:    1 MPLPTVTSKFDFNKFGLILSKYSYQIKKNDILAGIIIGVESNYALVDLGLEQICFLPLKEISIYPTIDPSELLNTNFVGEFLILDITNNHNRIIVSLKRLESIYLWNRLRQIDFTNMTIYAKIEKPLGKGKLVIFNGLNFFVLNSNIPKYYLRTNNKNLFMPFKFLEIKDYFHIAHVSSKLAIFSKVNKNLSIGTIYIGNITSIKDFGIFINVLGIKCFLHSSEIPQKQSKTTNLASLYKLGDQILIKIIYKDTERGRISLTLES 265          
BLAST of mRNA_E-siliculosus-1a_F_contig11797.1153.1 vs. uniprot
Match: A0A5B9RE09_9PHAE (30S ribosomal protein S1 n=2 Tax=Laminariales TaxID=2886 RepID=A0A5B9RE09_9PHAE)

HSP 1 Score: 386 bits (992), Expect = 1.850e-133
Identity = 189/265 (71.32%), Postives = 227/265 (85.66%), Query Frame = 0
Query:    1 MLLSIATSKFDFNKFGLILSQYSYKVKTNDILAGMVIGVESNYVLVDLGLEQVCFLPLKEISRFPIYNPTELLNINYVGEFLILDIKKKSNRIIISMKRVQSIYLWNRLRQIDFKNITIYAKLEESLMKGKLILFNGLFFFALNINIPKYYLRTNNKNLFMPFKFLEVKDSFHIAQMSSKLAIFSKINKNLVIGPIYLANVTAIKYFGVFVNILGVNCLLHISEIFKKTTQTENLSSLYKLGDQIKLKIISKDIERGRVSVALQN 265
            M +   TSK DFNKFGLILS+YSY++K NDILAG++IG+ESNY LVDLGLEQ+CFLPLKEIS +P  +P ELLN N+VGEFLI DI   S+RII+S+KR++SIYLWNRLRQIDF N+TIYAK+++SL KGKL++FNGL FF LN NIPKYYLRTNNKNLFMPFKFLEVKD FHIA +SS+LAIFSK+NKNL IG IYL N+T+I+ FG+F+N+LG+ C LHISEI +K  +T NL SLYKLGDQI +KII KD ERGR+SV L++
Sbjct:    1 MSIPTVTSKLDFNKFGLILSKYSYQIKKNDILAGIIIGIESNYALVDLGLEQICFLPLKEISIYPTMDPRELLNTNFVGEFLIFDIINNSSRIIVSLKRLESIYLWNRLRQIDFTNMTIYAKIQKSLGKGKLVIFNGLRFFVLNSNIPKYYLRTNNKNLFMPFKFLEVKDYFHIAHVSSRLAIFSKVNKNLSIGKIYLGNITSIRGFGIFINVLGIKCFLHISEISQKHNKTPNLGSLYKLGDQIPIKIIYKDTERGRISVTLES 265          
BLAST of mRNA_E-siliculosus-1a_F_contig11797.1153.1 vs. uniprot
Match: A0A8F0FAQ9_9PHAE (Ribosomal protein S1 n=2 Tax=Ecklonia TaxID=105406 RepID=A0A8F0FAQ9_9PHAE)

HSP 1 Score: 380 bits (976), Expect = 5.040e-131
Identity = 187/264 (70.83%), Postives = 225/264 (85.23%), Query Frame = 0
Query:    1 MLLSIATSKFDFNKFGLILSQYSYKVKTNDILAGMVIGVESNYVLVDLGLEQVCFLPLKEISRFPIYNPTELLNINYVGEFLILDIKKKSNRIIISMKRVQSIYLWNRLRQIDFKNITIYAKLEESLMKGKLILFNGLFFFALNINIPKYYLRTNNKNLFMPFKFLEVKDSFHIAQMSSKLAIFSKINKNLVIGPIYLANVTAIKYFGVFVNILGVNCLLHISEIFKKTTQTENLSSLYKLGDQIKLKIISKDIERGRVSVALQ 264
            M L   TSKFDFNKFGLILS+YSY++K NDILAG++IG+ESNY LVDLGLEQ+CFLPLKEIS +P+ N  ELLN N+VGEFLILDI    +RII+S+KR++SIYLWNRLRQ+DF N+TIYAK+E+ L KGKL++FNGL FF LN+NIPKYYLRTN KNLFMPFKFLEVKD FHIAQ+SS+LAIF+K+NKNL I  IY+ N+T+IK FG+F+N+LG+ CLLHISEI +   +  NL SLYKLGDQI +KII KD ERGR+SV L+
Sbjct:    1 MPLPTVTSKFDFNKFGLILSKYSYQIKKNDILAGIIIGLESNYALVDLGLEQICFLPLKEISIYPLVNTRELLNTNFVGEFLILDITNNHSRIIVSLKRLESIYLWNRLRQLDFTNMTIYAKIEKPLGKGKLVIFNGLKFFVLNLNIPKYYLRTNKKNLFMPFKFLEVKDYFHIAQVSSRLAIFTKVNKNLSIRKIYIGNITSIKDFGIFINVLGIKCLLHISEISQNHNKIPNLVSLYKLGDQIPIKIIYKDTERGRISVTLK 264          
BLAST of mRNA_E-siliculosus-1a_F_contig11797.1153.1 vs. uniprot
Match: A0A8F0F7Y6_9PHAE (Ribosomal protein S1 n=2 Tax=Laminariales TaxID=2886 RepID=A0A8F0F7Y6_9PHAE)

HSP 1 Score: 372 bits (954), Expect = 1.050e-127
Identity = 185/263 (70.34%), Postives = 224/263 (85.17%), Query Frame = 0
Query:    1 MLLSIATSKFDFNKFGLILSQYSYKVKTNDILAGMVIGVESNYVLVDLGLEQVCFLPLKEISRFPIYNPTELLNINYVGEFLILDIKKKSNRIIISMKRVQSIYLWNRLRQIDFKNITIYAKLEESLMKGKLILFNGLFFFALNINIPKYYLRTNNKNLFMPFKFLEVKDSFHIAQMSSKLAIFSKINKNLVIGPIYLANVTAIKYFGVFVNILGVNCLLHISEIFKKTTQTENLSSLYKLGDQIKLKIISKDIERGRVSVAL 263
            MLLSI TSKFDFNKFGLILS+YSY++K NDILAG++IG+ESNY LVDLGL+Q+CFLP++E++ +   +P +LLNIN++GEFLIL+I K  +RII+S+KR++SIYLWNRLRQ+DF NITIYAK+E+SL KGKLI FNGL FF LN NIPKYYLR NNKNLFMPFKFLEVKDSFHIA  +SKLAIFSK+++NL IG  YL  +T+IK FG+FVNI G+ CLLHISEI +K ++   L S Y+LGDQI LKII KD ERGR+SV L
Sbjct:    1 MLLSIVTSKFDFNKFGLILSKYSYQIKKNDILAGIIIGIESNYALVDLGLDQICFLPIEELAIYLTVDPHKLLNINFIGEFLILNITKNQSRIILSLKRIESIYLWNRLRQLDFTNITIYAKIEKSLGKGKLINFNGLVFFVLNSNIPKYYLRGNNKNLFMPFKFLEVKDSFHIAHTNSKLAIFSKVSRNLAIGSNYLGTITSIKDFGIFVNITGIKCLLHISEISQKQSKKPKLISSYRLGDQIWLKIIYKDTERGRISVTL 263          
BLAST of mRNA_E-siliculosus-1a_F_contig11797.1153.1 vs. uniprot
Match: A0A8F0F8H5_MACPY (Ribosomal protein S1 n=13 Tax=Laminariales TaxID=2886 RepID=A0A8F0F8H5_MACPY)

HSP 1 Score: 371 bits (952), Expect = 2.430e-127
Identity = 184/266 (69.17%), Postives = 222/266 (83.46%), Query Frame = 0
Query:    1 MLLSIATSKFDFNKFGLILSQYSYKVKTNDILAGMVIGVESNYVLVDLGLEQVCFLPLKEISRFPIYNPTELLNINYVGEFLILDIKKKSNRIIISMKRVQSIYLWNRLRQIDFKNITIYAKLEESLMKGKLILFNGLFFFALNINIPKYYLRTNNKNLFMPFKFLEVKDSFHIAQMSSKLAIFSKINKNLVIGPIYLANVTAIKYFGVFVNILGVNCLLHISEIFKKTTQTENLSSLYK--LGDQIKLKIISKDIERGRVSVALQ 264
            M L+  TSKFDFNKFGLILS+YSY++K NDILAG++IG+ESNY LVDLGLEQ+CFLP+KEIS +P  +P ELLN N+V EFLILDI    +RII+S+KR++SIYLWNRLRQIDF N+TIYAK+E+ L KGKL++FNGL FF LN NIPKYYLRT NKNLFMPFKFLEVKD FHIA +SS+LAIFSK+NKNL +   Y  N+TAI+ FG+F+N+LG+ C LHISEIF+   +  N+SSLYK  LGDQI +KII KD ERGR+SV L+
Sbjct:    1 MPLTTVTSKFDFNKFGLILSKYSYQIKKNDILAGIIIGIESNYALVDLGLEQICFLPIKEISIYPTIDPRELLNSNFVSEFLILDITNDHSRIIVSLKRLESIYLWNRLRQIDFPNMTIYAKIEKPLGKGKLVIFNGLRFFVLNANIPKYYLRTKNKNLFMPFKFLEVKDYFHIAHVSSRLAIFSKVNKNLSLRETYRGNITAIRDFGIFINVLGIKCFLHISEIFQNHNKITNISSLYKYKLGDQISIKIIYKDTERGRISVTLK 266          
BLAST of mRNA_E-siliculosus-1a_F_contig11797.1153.1 vs. uniprot
Match: A0A8F0F9U3_9PHAE (Ribosomal protein S1 n=1 Tax=Chorda asiatica TaxID=1281577 RepID=A0A8F0F9U3_9PHAE)

HSP 1 Score: 362 bits (930), Expect = 5.400e-124
Identity = 179/263 (68.06%), Postives = 216/263 (82.13%), Query Frame = 0
Query:    1 MLLSIATSKFDFNKFGLILSQYSYKVKTNDILAGMVIGVESNYVLVDLGLEQVCFLPLKEISRFPIYNPTELLNINYVGEFLILDIKKKSNRIIISMKRVQSIYLWNRLRQIDFKNITIYAKLEESLMKGKLILFNGLFFFALNINIPKYYLRTNNKNLFMPFKFLEVKDSFHIAQMSSKLAIFSKINKNLVIGPIYLANVTAIKYFGVFVNILGVNCLLHISEIFKKTTQTENLSSLYKLGDQIKLKIISKDIERGRVSVAL 263
            M LSI  S FDFNKFGL+LS+YSY+ K NDILAG+VIG+ESNY LVD GLEQ+CFLPLKEIS  P  +  E LNIN++GEF ILDI  + NRIIIS++R++SIYLWNRLRQIDF NITIYAK+E+S+ KGKL +FNGL  F LN NIPKYYLR + KN+FMPFKFLEVKD +H+A +SSKLAIFSK+N NL IG IY  N+ +I+ FGVF+NILG+ CLLHISEI +K  +  NL+ LYK+GDQ+KLK+I KD +RGR+SV L
Sbjct:    1 MPLSIVPSTFDFNKFGLLLSKYSYQAKKNDILAGIVIGIESNYALVDFGLEQICFLPLKEISICPTLDLREFLNINFIGEFSILDITNRQNRIIISLRRIESIYLWNRLRQIDFSNITIYAKIEKSIGKGKLTIFNGLLLFVLNSNIPKYYLRIDRKNIFMPFKFLEVKDYYHVAHISSKLAIFSKVNNNLTIGLIYSGNIVSIRDFGVFINILGIKCLLHISEISQKQKKVTNLNLLYKVGDQLKLKVIYKDTKRGRISVTL 263          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig11797.1153.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D1J709_ECTSI4.320e-17896.60Chloroplast 30S ribosomal protein S1 n=2 Tax=Ectoc... [more]
A0A5A4MJF2_9PHAE2.300e-14881.5130S ribosomal protein S1 n=5 Tax=Scytosiphonaceae ... [more]
A0A6B7EVE1_9PHAE2.200e-14679.2530S ribosomal protein S1 n=1 Tax=Cladosiphon okamu... [more]
A0A1I9LVS8_9PHAE5.530e-14277.3630S ribosomal protein S1 n=1 Tax=Pleurocladia lacu... [more]
A0A0R6M9B1_UNDPI1.120e-13472.0830S ribosomal protein S1 n=11 Tax=Laminariales Tax... [more]
A0A5B9RE09_9PHAE1.850e-13371.3230S ribosomal protein S1 n=2 Tax=Laminariales TaxI... [more]
A0A8F0FAQ9_9PHAE5.040e-13170.83Ribosomal protein S1 n=2 Tax=Ecklonia TaxID=105406... [more]
A0A8F0F7Y6_9PHAE1.050e-12770.34Ribosomal protein S1 n=2 Tax=Laminariales TaxID=28... [more]
A0A8F0F8H5_MACPY2.430e-12769.17Ribosomal protein S1 n=13 Tax=Laminariales TaxID=2... [more]
A0A8F0F9U3_9PHAE5.400e-12468.06Ribosomal protein S1 n=1 Tax=Chorda asiatica TaxID... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR022967RNA-binding domain, S1SMARTSM00316S1_6coord: 192..264
e-value: 2.5E-10
score: 50.3
coord: 27..98
e-value: 3.2E-7
score: 40.0
NoneNo IPR availableGENE3D2.40.50.140coord: 15..111
e-value: 2.6E-11
score: 45.2
NoneNo IPR availableGENE3D2.40.50.140coord: 182..265
e-value: 2.2E-14
score: 55.1
NoneNo IPR availablePANTHERPTHR10724:SF9coord: 4..262
NoneNo IPR availablePANTHERPTHR10724S1 RNA-BINDING DOMAIN-CONTAINING PROTEIN 1coord: 4..262
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 132..152
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 153..195
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..131
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 196..220
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 221..265
NoneNo IPR availableTMHMMTMhelixcoord: 198..220
NoneNo IPR availableTMHMMTMhelixcoord: 132..154
IPR003029S1 domainPFAMPF00575S1coord: 25..98
e-value: 1.8E-7
score: 31.4
coord: 194..262
e-value: 2.8E-10
score: 40.4
IPR003029S1 domainPROSITEPS50126S1coord: 194..264
score: 15.814
IPR003029S1 domainPROSITEPS50126S1coord: 29..98
score: 11.877
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 184..261
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 24..112

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig11797contigE-siliculosus-1a_F_contig11797:666..1463 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig11797.1153.1mRNA_E-siliculosus-1a_F_contig11797.1153.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig11797 666..1463 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig11797.1153.1 ID=prot_E-siliculosus-1a_F_contig11797.1153.1|Name=mRNA_E-siliculosus-1a_F_contig11797.1153.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=266bp
MLLSIATSKFDFNKFGLILSQYSYKVKTNDILAGMVIGVESNYVLVDLGL
EQVCFLPLKEISRFPIYNPTELLNINYVGEFLILDIKKKSNRIIISMKRV
QSIYLWNRLRQIDFKNITIYAKLEESLMKGKLILFNGLFFFALNINIPKY
YLRTNNKNLFMPFKFLEVKDSFHIAQMSSKLAIFSKINKNLVIGPIYLAN
VTAIKYFGVFVNILGVNCLLHISEIFKKTTQTENLSSLYKLGDQIKLKII
SKDIERGRVSVALQN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012340NA-bd_OB-fold
IPR003029S1_domain
IPR022967S1_dom