prot_E-siliculosus-1a_F_contig1179.1150.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1179.1150.1
Unique Nameprot_E-siliculosus-1a_F_contig1179.1150.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length765
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1179.1150.1 vs. uniprot
Match: A0A6H5L8H1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8H1_9PHAE)

HSP 1 Score: 629 bits (1621), Expect = 1.500e-213
Identity = 523/642 (81.46%), Postives = 530/642 (82.55%), Query Frame = 0
Query:    1 MYTAPPNHLLQTPMAPPGGHSKRIPPPWPAAGCPAALVSKATALLLLICTLDSASGFAPHTFSSSARQQLRRYRPSCDPSFGRRRGGAPVSAGPSXXXXXXXXXXXXXXXXXXXXVKFAGGRVTRPVQQXXXXXXXXXXXDVRKKSARWGVKPPSPPKLPSIPDVRSLKNPLDGVGKSLRKVGSGVAAVKDAVYGAADAAGSVXXXXXXXXXXXXAGKAPGDGGAMPQLAATASVTPVAPSNAPGGAKRGLRLLVGGVVAAKDAFWGSLDALGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWGTVEGVDHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAQKKVDGVLASVASTQASAESFVSGVKGGVDTVSSLAQRASAVATGKERXXXXXXXXXXAEARRKEKIKNALVTFGGEPYTAKDIAFATLKALGATAQGAVVVGKGLFGFAKEAKSIPVEVARTLLGPLYKYQQSQKRVQDAVDLQRMASAPTARVDDAPSSAAGGAATKELPGGGKDAGEEP 642
            MYTAPPN LLQTPMAPPGGHSKRIPPPWPA GCP  LVSKATALLLLICTLDS SGFAPHTFSSSARQQLRRYRPSCDPSFGRRRG AP+SAGPS                    VKFAGGRVTRPV+Q           DVRKKSARWGVKPPSPPKLPSIPDVRSLKNPLDGVGKSLRKVGSGVAAVKDA YGAADAAGS+            AGKA GDGGAMPQLAATASVTPV PSNAPGGAKR LRLLVGG VAAKDAFWGSLD L    XXXXXXXXXXXXXXXXXXXXXXXXXXXXX              XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX              XXXXXXXXXXXXXXXXXXXX        WGTVEGVDH            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX AQKKVDGVLASV STQASAESFVSGVKGGVDTVSSLAQRA+AVATGKE XXXXXXXXXXAEARRKEK+KNALVTFGGEPYTAKDIAFATLKALGATAQGAVVVGKGLFGFA+EA+SIPVEVARTLLGPLYKYQQSQKRVQDAVDLQR ASAPTARVDDAPSSAAGGAATKELPGGGK AGEEP
Sbjct:    1 MYTAPPNRLLQTPMAPPGGHSKRIPPPWPAVGCPTTLVSKATALLLLICTLDSGSGFAPHTFSSSARQQLRRYRPSCDPSFGRRRGVAPLSAGPSSSSPTPPKRSSAKKKGTNS-VKFAGGRVTRPVEQPEGDNKDDEEEDVRKKSARWGVKPPSPPKLPSIPDVRSLKNPLDGVGKSLRKVGSGVAAVKDAAYGAADAAGSIAEQVQGVADAAAAGKAAGDGGAMPQLAATASVTPVVPSNAPGGAKRALRLLVGGAVAAKDAFWGSLDTLSSAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAKENAQAVARAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEMAEKRRRQQEERLXXXXXXXXXXXXXXXXXXXXVESAKAVVWGTVEGVDHLVDAVASTPAAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQKKVDGVLASVTSTQASAESFVSGVKGGVDTVSSLAQRAAAVATGKEXXXXXXXXXXXAEARRKEKMKNALVTFGGEPYTAKDIAFATLKALGATAQGAVVVGKGLFGFAREARSIPVEVARTLLGPLYKYQQSQKRVQDAVDLQRTASAPTARVDDAPSSAAGGAATKELPGGGKYAGEEP 641          
BLAST of mRNA_E-siliculosus-1a_F_contig1179.1150.1 vs. uniprot
Match: D7G6H7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6H7_ECTSI)

HSP 1 Score: 448 bits (1152), Expect = 3.300e-146
Identity = 454/527 (86.15%), Postives = 457/527 (86.72%), Query Frame = 0
Query:   14 MAPPGGHSKRIPPPWPAAGCPAALVSKATALLLLICTLDSASGFAPHTFSSSARQQLRRYRPSCDPSFGRRRGGAPVSAGPSXXXXXXXXXXXXXXXXXXXXVKFAGGRVTRPVQQXXXXXXXXXXXDVRKKSARWGVKPPSPPKLPSIPDVRSLKNPLDGVGKSLRKVGSGVAAVKDAVYGAADAAGSVXXXXXXXXXXXXAGKAPGDGGAMPQLAATASVTPVAPSNAPGGAKRGLRLLVGGVVAAKDAFWGSLDALGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWGTVEGVDHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAQKKVDGVLASVASTQASAESFVSGVKGGVDTVSSLAQRASAVATGKERXXXXXXXXXXAEARRKEKIKNALVTFGGEPYT 540
            MAPPGGHSKRIPPPWPAAGCP ALVSKATALLLLICTLDSASGFA HTFSSSARQQLRRYRPSCDPSFGRRRGGAP+S  PS                    VKFAGGRVTRPVQQ           DVRKKSARWGVKPPSPPKLPSIPDVRSLKNPLDGVGKSLRKVGSGVAAVKDAVYGAADAAGSV            AGKAPGDGGAMPQLAATASVTPVAPSNAPGGAKR LRLLVGG VAAKDAFWGSLDALGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     XXXXXXXXXXXXXXXXXXXXXXXXX               XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWGTVEGVDHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX AQKKVDGVLASVASTQASAESFVSGVKGGVDTVSSLAQRASAVATGKE+XXXXXXXXXXAEARRKEK+KNALVTFGGEPYT
Sbjct:    1 MAPPGGHSKRIPPPWPAAGCPTALVSKATALLLLICTLDSASGFAGHTFSSSARQQLRRYRPSCDPSFGRRRGGAPLSEAPSSSSPTPPKRPSASKKKGTSAVKFAGGRVTRPVQQPEGNKDDEEE-DVRKKSARWGVKPPSPPKLPSIPDVRSLKNPLDGVGKSLRKVGSGVAAVKDAVYGAADAAGSVAEQVQGVADAAAAGKAPGDGGAMPQLAATASVTPVAPSNAPGGAKRALRLLVGGAVAAKDAFWGSLDALGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNAHAVXXXXXXXXXXXXXXXXXXXXXXXXXKEGVYGAVDAVSRLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWGTVEGVDHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQKKVDGVLASVASTQASAESFVSGVKGGVDTVSSLAQRASAVATGKEKXXXXXXXXXXAEARRKEKMKNALVTFGGEPYT 526          
BLAST of mRNA_E-siliculosus-1a_F_contig1179.1150.1 vs. uniprot
Match: D7G6H8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6H8_ECTSI)

HSP 1 Score: 236 bits (603), Expect = 2.660e-69
Identity = 170/226 (75.22%), Postives = 173/226 (76.55%), Query Frame = 0
Query:  539 YTAKDIAFATLKALGATAQGAVVVGKGLFGFAKEAKSIPVEVARTLLGPLYKYQQSQKRVQDAVDLQRMASAPTARVDDAPSSAAGGAATKELPGGGKDAGEEPSPKSSAAPEVTVVTPTXXXXSKLTAATPAEATTGVPSKAPGSEKKKDSSTPKPVAKPAEARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEAEERAAELEFMKEMKAEADKNAPP 764
            Y+AKDIAFATLKALGATAQGAVVVGKGLFGFAKEAKSIPVEVARTLLGPLYKYQQSQKRVQDAVDLQRMASAPTARVD APSS  GG A K+LPG                PEVTVV   XXXX        AEATT VPSKAPGSEKKKD+STPKPVAKPAEAR    XXXXXXXXXXXXXXXX               VEAEERAAELEFMKEMKAEADKN PP
Sbjct:    2 YSAKDIAFATLKALGATAQGAVVVGKGLFGFAKEAKSIPVEVARTLLGPLYKYQQSQKRVQDAVDLQRMASAPTARVDVAPSSGGGGGAAKDLPGXXXXXXXXXXXXXXXXPEVTVVXXXXXXXXXXXXXXXAEATTAVPSKAPGSEKKKDASTPKPVAKPAEARGATTXXXXXXXXXXXXXXXXPAEKKEGTRNKKKKDVEAEERAAELEFMKEMKAEADKNTPP 227          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1179.1150.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5L8H1_9PHAE1.500e-21381.46Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G6H7_ECTSI3.300e-14686.15Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G6H8_ECTSI2.660e-6975.22Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 502..529
NoneNo IPR availableCOILSCoilCoilcoord: 358..389

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1179contigE-siliculosus-1a_F_contig1179:23885..32267 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1179.1150.1mRNA_E-siliculosus-1a_F_contig1179.1150.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1179 23851..33182 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1179.1150.1 ID=prot_E-siliculosus-1a_F_contig1179.1150.1|Name=mRNA_E-siliculosus-1a_F_contig1179.1150.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=765bp
MYTAPPNHLLQTPMAPPGGHSKRIPPPWPAAGCPAALVSKATALLLLICT
LDSASGFAPHTFSSSARQQLRRYRPSCDPSFGRRRGGAPVSAGPSSSSPT
PPKRPSAAKKKGTSSVKFAGGRVTRPVQQPDGGNKDDEEEDVRKKSARWG
VKPPSPPKLPSIPDVRSLKNPLDGVGKSLRKVGSGVAAVKDAVYGAADAA
GSVAEQVQGVADAAGAGKAPGDGGAMPQLAATASVTPVAPSNAPGGAKRG
LRLLVGGVVAAKDAFWGSLDALGAAADAATKAPEVAKGIVEDGKATIEGG
KAAIEGAKENAHAVARAPAQAAEAVSGAVKEVGKAATSVKEGVYGAVDAV
SRLADMPAEMAEKRRRQQEERLEREKKAAAERRAAAAKLGAAVESAKAVV
WGTVEGVDHLVDAVASAPAAVSDGVIKAKEAVTSAQEAAASAGEVLESIP
RTVQEIPKEAQKKVDGVLASVASTQASAESFVSGVKGGVDTVSSLAQRAS
AVATGKERQEREEREKREAEARRKEKIKNALVTFGGEPYTAKDIAFATLK
ALGATAQGAVVVGKGLFGFAKEAKSIPVEVARTLLGPLYKYQQSQKRVQD
AVDLQRMASAPTARVDDAPSSAAGGAATKELPGGGKDAGEEPSPKSSAAP
EVTVVTPTTPAASKLTAATPAEATTGVPSKAPGSEKKKDSSTPKPVAKPA
EARAAPTAPPAQPPPAAKKPETAPAEKEKDTRSKKKKDVEAEERAAELEF
MKEMKAEADKNAPP*
back to top