prot_E-siliculosus-1a_F_contig1176.1137.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_E-siliculosus-1a_F_contig1176.1137.1
Unique Name	prot_E-siliculosus-1a_F_contig1176.1137.1
Type	polypeptide
Organism	Ectocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length	508

Homology

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BLAST of mRNA_E-siliculosus-1a_F_contig1176.1137.1 vs. uniprot
Match: A0A6H5K0Y1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0Y1_9PHAE)

HSP 1 Score: 887 bits (2293), Expect = 0.000e+0
Identity = 469/508 (92.32%), Postives = 478/508 (94.09%), Query Frame = 0

Query:    1 GPFSYEHRETAPPWSVGWLPTSPTMAEQHTDDAFSRPRELLLGDHAHTDQQKKKLFVGMAPKSAYEEDYRAVFEPFGTPIDIYVIRDRNGFSKGCAFVRYESVKSASDAIEALHDKHIMPGGFRTLVVTVADDRRGPQTSAVGTTTTRRDAVGSGDGLFRSLSRPSSFMGSDSGGGGSIPSLGNVVGQNRSTVTAPQAGATAFAPTVAPGSGXXXXQLSGMPYFLCGGNPPQGTYVYYPYVPSSSVQHDTGSSAAPVGIGAKPHHAFSVGSPAVGNNDRCELGARGAQEDGYTGDRTVRKFGTGGPEERGRRWAKQSVGPTGANLFVYYLPGSLTDADLATAFAPFGEVLSAKVYYDRDTGESKGFGFVSYSKPDEAEAAISSMNGFFIGQKRLKVVRKRGQQTDRCLDSSSXXXXXXXXXXXXXXXXXXXXIGRPSDPGYAAGDGSCGLARPDSGASGNAGTNVVVGSGMNNGNGDGTSHRSILGSGSQADLEFFTPEGLLGPSMTR 508
            GPFS+EHRETAP WSVGWLPTSPTMAEQH DDAFSRPRE+LLGDHAHTDQQKKKLFVGMAPKSAYEEDYRAVFEPFGTPIDIYVIRDRNGFSKGCAFVRYESV+SASDAIEALHDK+IMPGGFRTLVVTVADDRRGPQTSAVGTTTTRRDAVGSGD L RSLSRPSSFMGSDS  GGSIPS GN+VGQNRSTV APQAGATA APT+APGS      LSGMPYFLCGGNPPQGTYVYYPYVPSSSVQHDTG S APVGIGAKPHHAFSVGSPAVGNNDRCELGARGAQEDGYTGDRTVRKFGTGGPEERGRRWAKQSVGPTGANLFVYYLPGSLTDADLATAFAPFGEVLSAKVYYDRDTGESKGFGFVSYSKPDEAEAAISSMNGFFIGQKRLKVVRKRGQQTDRCLDSS XXXXXXXXXXXXXXX      GRP DPGYAA DGSCGLARPD GASG AG+NVVVGSG+NNGNGDGTSHRSI GSGSQADL+F TPEGLLGPSMTR
Sbjct:   10 GPFSFEHRETAPTWSVGWLPTSPTMAEQHNDDAFSRPREMLLGDHAHTDQQKKKLFVGMAPKSAYEEDYRAVFEPFGTPIDIYVIRDRNGFSKGCAFVRYESVRSASDAIEALHDKYIMPGGFRTLVVTVADDRRGPQTSAVGTTTTRRDAVGSGDVLLRSLSRPSSFMGSDSSVGGSIPSFGNLVGQNRSTVAAPQAGATAVAPTIAPGSRPSSGLLSGMPYFLCGGNPPQGTYVYYPYVPSSSVQHDTGLSVAPVGIGAKPHHAFSVGSPAVGNNDRCELGARGAQEDGYTGDRTVRKFGTGGPEERGRRWAKQSVGPTGANLFVYYLPGSLTDADLATAFAPFGEVLSAKVYYDRDTGESKGFGFVSYSKPDEAEAAISSMNGFFIGQKRLKVVRKRGQQTDRCLDSSXXXXXXXXXXXXXXXXS-----GRPRDPGYAASDGSCGLARPDRGASGIAGSNVVVGSGVNNGNGDGTSHRSIFGSGSQADLDF-TPEGLLGPSMTR 511

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BLAST of mRNA_E-siliculosus-1a_F_contig1176.1137.1 vs. uniprot
Match: D7FV61_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV61_ECTSI)

HSP 1 Score: 777 bits (2006), Expect = 1.360e-281
Identity = 385/394 (97.72%), Postives = 387/394 (98.22%), Query Frame = 0

Query:    1 GPFSYEHRETAPPWSVGWLPTSPTMAEQHTDDAFSRPRELLLGDHAHTDQQKKKLFVGMAPKSAYEEDYRAVFEPFGTPIDIYVIRDRNGFSKGCAFVRYESVKSASDAIEALHDKHIMPGGFRTLVVTVADDRRGPQTSAVGTTTTRRDAVGSGDGLFRSLSRPSSFMGSDSGGGGSIPSLGNVVGQNRSTVTAPQAGATAFAPTVAPGSGXXXXQLSGMPYFLCGGNPPQGTYVYYPYVPSSSVQHDTGSSAAPVGIGAKPHHAFSVGSPAVGNNDRCELGARGAQEDGYTGDRTVRKFGTGGPEERGRRWAKQSVGPTGANLFVYYLPGSLTDADLATAFAPFGEVLSAKVYYDRDTGESKGFGFVSYSKPDEAEAAISSMNGFFIGQKRL 394
            GPFSYEHRETAPPWSVGWLPTSPTMAEQHTDDAFSRPRELLLGDHAHTDQQKKKLFVGMAPKSAYEEDYRAVFEPFGTPIDIYVIRDRNGFSKGCAFVRYESVKSASDAIEALHDKHIMPGGFRTLVVTVADDRRGPQTSAVGTTTTRRDAVGSGDGLFR+LSRPSSFMGSDSGGGG+IPSLGNVVGQNRSTVTAPQAGATAFAPTVAPGSG     LSGMPYFLCGGNPPQGTYVYYPYVPSSSVQHDTGSSAAP GIGAKPHHAFSVGSPAVGNNDRCELGARGAQEDGYTGDRTVRKFGTGGPEERGRRWAKQSVGPTGANLFVYYLPGSLTDADLATAFAPFGEVLSAKVYYDRDTGESKGFGFVSYSKPDEAEAAISSMNGFFIGQK L
Sbjct:    7 GPFSYEHRETAPPWSVGWLPTSPTMAEQHTDDAFSRPRELLLGDHAHTDQQKKKLFVGMAPKSAYEEDYRAVFEPFGTPIDIYVIRDRNGFSKGCAFVRYESVKSASDAIEALHDKHIMPGGFRTLVVTVADDRRGPQTSAVGTTTTRRDAVGSGDGLFRALSRPSSFMGSDSGGGGTIPSLGNVVGQNRSTVTAPQAGATAFAPTVAPGSGPSSGLLSGMPYFLCGGNPPQGTYVYYPYVPSSSVQHDTGSSAAPAGIGAKPHHAFSVGSPAVGNNDRCELGARGAQEDGYTGDRTVRKFGTGGPEERGRRWAKQSVGPTGANLFVYYLPGSLTDADLATAFAPFGEVLSAKVYYDRDTGESKGFGFVSYSKPDEAEAAISSMNGFFIGQKFL 400

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BLAST of mRNA_E-siliculosus-1a_F_contig1176.1137.1 vs. uniprot
Match: D7FV60_ECTSI (Trinucleotide repeat containing 4, isoform CRA_d n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FV60_ECTSI)

HSP 1 Score: 229 bits (584), Expect = 1.540e-65
Identity = 157/363 (43.25%), Postives = 192/363 (52.89%), Query Frame = 0

Query:   50 QQKKKLFVGMAPKSAYEEDYRAVFEPFGTPIDIYVIRDRNGFSKGCAFVRYESVKSASDAIEALHDKHIMPGGFRTLVVTVADDRRGPQTSAVGTTTTRRDAVGSGDGLFRSLSRPSSFMGSDSGGGGSIPSLGNVVGQNRSTVTAPQAGATAFAPTVAPGSGXXXXQLSGMPYFLCGGN------PPQGTYVYYPYVPSSSVQHDTGSSAAPVGIGAKPHHAFSVGSPAVGNNDRCELGARGAQEDGYTGDRTVRKFGTGGPEERGRRWAKQSVGPTGANLFVYYLPGSLTDADLATAFAPFGEVLSAKVYYDRDTGESKGFGFVSYSKPDEAEAAISSMNGFFIGQKRLKVVRKR-GQQTD 405
            +Q+ KLFVGMAPKSA E++ RAVF P+GT  +I+VIR+++G +KGCAFV+Y + +SA DAIEALH+++ M GG R LVV  AD++RG Q +A           G   GL  S  R  S    ++GG    P  G               G  A  P   PG       +SGMPY +  G       P QG+YVYYPY          G+   P   G    +     SP+ G                                       + + GP GANLF+Y+LP  L+DADLATAFAPFG VLSAKVY DR +GESKGFGFVSYS P  AEAAI+ MNGF IG KRLKV  KR GQ TD
Sbjct:  128 EQENKLFVGMAPKSANEDEIRAVFAPYGTLREIHVIRNQDGTNKGCAFVKYTTRQSALDAIEALHEQYTMQGGPRPLVVKFADNKRGTQAAA-----------GRLGGLIGSPGRHGSGPHPEAGGWMGHPGAG---------------GQGAGYPYPMPGPPMSPHMMSGMPYGMAYGGGQAPGAPAQGSYVYYPY----------GAPGYPPQPGGPGQYHSGPPSPSRGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-XXXTRPAEGPPGANLFIYHLPQDLSDADLATAFAPFGHVLSAKVYIDRASGESKGFGFVSYSLPSHAEAAIAQMNGFQIGSKRLKVQHKRRGQSTD 453

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BLAST of mRNA_E-siliculosus-1a_F_contig1176.1137.1 vs. uniprot
Match: D0NNK0_PHYIT (CUG-BP-and ETR-3-like factor, putative n=17 Tax=Phytophthora TaxID=4783 RepID=D0NNK0_PHYIT)

HSP 1 Score: 181 bits (459), Expect = 1.880e-47
Identity = 145/364 (39.84%), Postives = 184/364 (50.55%), Query Frame = 0

Query:   51 QKKKLFVGMAPKSAYEEDYRAVFEPFGTPIDIYVIRD-RNGFSKGCAFVRYESVKSASDAIEALHDKHIMPGGFRTLVVTVADDRRGPQTSAVGTTTTRRDAVGSGDGLFRSLSRPSS-FMGSDSGGGGSIPSLGNVVGQNRSTVTAPQAGATA-FAPTVAPGSGXXXXQLSGMPYFLCGGNPPQGTYVYYPYVPSSSVQHDTGSSAAPVGIGAKPHHAFSVGSPAVGNNDRCELGARGAQEDGYTGDRTVRKFGTGGPEERGRRWAKQSVGPTGANLFVYYLPGSLTDADLATAFAPFGEVLSAKVYYDRDTGESKGFGFVSYSKPDEAEAAISSMNGFFIGQKRLKVVRKRGQQTDRCLDSS 411
            Q+ KLF+GM PK+A E   R VFE FG+  ++Y++R    G SKGCAF++++   SA  AIE ++    M  G   LVV  AD RR     A                  R+L+  ++ +     G G + P L  +  Q    + A  A A A  +PTVA G G      +  P     G+P      Y PY  ++         AAP G G  P+ A      A G + +  LGA            ++   G G    +  R   Q  GPTGANLF+Y+LP  LTDADLATAFAPFG V+SAKVY D+ TGESKGFGFVSY   D A+AAI+SMNGF IG KRLKV  KR  Q    L  S
Sbjct:  119 QEHKLFIGMIPKTADEAAIRDVFELFGSIEEVYILRHPATGQSKGCAFLKFKERSSALAAIEEVNGIVTMDRGTSPLVVKFADSRRQRLQRA------------------RNLAAATNAYWPLPPGAGLAFPQLQQLQQQYMQQMQAFGAQAAAGMSPTVA-GLGSPVGATASGP-----GSPTNSFMYYNPYGFAAGA-------AAPYGFGGMPNVA------AAGFDMQTGLGA------------SLDLQGQGAEAAKASRTTSQLEGPTGANLFIYHLPHDLTDADLATAFAPFGTVISAKVYMDKITGESKGFGFVSYDSADAADAAIASMNGFQIGTKRLKVQHKRIHQRSDYLGGS 433

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BLAST of mRNA_E-siliculosus-1a_F_contig1176.1137.1 vs. uniprot
Match: A0A7S4QD22_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QD22_9STRA)

HSP 1 Score: 181 bits (460), Expect = 2.300e-46
Identity = 144/368 (39.13%), Postives = 179/368 (48.64%), Query Frame = 0

Query:   54 KLFVGMAPKSAYEEDYRAVFEPFGTPIDIYVIRDRNGFSKGCAFVRYESVKSASDAIEALHDKHIMPGGFRTLVVTVADDRRGPQTSAVGTTTTRRDAVGSGDGLFRSLSRPSSFMGSDSGGGGSIPSL-GNVVGQNRSTVTAPQAGATAFAPTVAPGSGXXXXQLSGMPYFLCGGNPPQ---GTYVYYPYVPSSS-----------VQHDTGSSAAPVGIGAKPHHAFSVGS--PAVGNNDRCELGARGAQEDGYTGDRTVRKFGTGGPEERGRRWAKQSVGPTGANLFVYYLPGSLTDADLATAFAPFGEVLSAKVYYDRDTGESKGFGFVSYSKPDEAEAAISSMNGFFIGQKRLKVVRKRGQQT 404
            KLFVGM P+   E+D R +F PFG    IY+IR+ +G  KGCAFV++   +SA  AI  LH ++ M G  R+LVV  AD  +G + ++      RR+A    + +      P S     SG GG  P + G   G   +    PQAG  A               +SG   +  G  PPQ   G Y +  + P SS                  +AAP G+       FS G   P   + ++     RG   DG     T  +     P E          GP GANLF+Y+LP  LTDADLATAF PFG V+SAKVY DR TGESKGFGFVSY     AE AI  MNGF IG KRLKV  KR  +T
Sbjct:  281 KLFVGMLPRKTTEKDLREIFSPFGDISAIYLIRNDDGTQKGCAFVKFHQRESAQAAINTLHGQYCMEGMRRSLVVKYAD--KGYRRASRRYQAARREAYE--NAVMHGHPNPGSVFYVPSGPGGPPPQMPGFPPGGPMAYPQPPQAGPHAEGTQGPSPPMGISPPVSGTGQYSVG-QPPQYATGAYPHGSHTPPSSQXXXXXXXXXXXXXXXXXAAAPYGM----PQGFSGGQAGPGGAHQNKPRFYGRGQNRDGQLPHATTPR-----PRE----------GPAGANLFIYHLPHDLTDADLATAFNPFGNVISAKVYVDRYTGESKGFGFVSYDSVISAEHAIEQMNGFQIGTKRLKVQHKRVTKT 624

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BLAST of mRNA_E-siliculosus-1a_F_contig1176.1137.1 vs. uniprot
Match: A0A1W0A7F0_9STRA (CUG-BP-and ETR-3-like factor n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A7F0_9STRA)

HSP 1 Score: 174 bits (441), Expect = 2.030e-45
Identity = 144/390 (36.92%), Postives = 184/390 (47.18%), Query Frame = 0

Query:   24 TMAEQHTDDAFSRPRELLLGDHAHTDQQKKKLFVGMAPKSAYEEDYRAVFEPFGTPIDIYVIRD-RNGFSKGCAFVRYESVKSASDAIEALHDKHIMPGGFRTLVVTVADDRRGPQTSAVGTTTTRRDAVGSGDGLFRSLSRPSSFMGSDSGGGGSIPSLGNVVGQNRSTVTAPQAGATAFAPTVAPGSGXXXXQLSGMPYFLCGGNPPQGTYVYY-PYVPSSSVQHDTGSSAAPVGIGAKPHHAFSVGSPAVGNNDRCELGARGAQEDGYTGDRTVRKFGTGGPEERGRRWAKQSVGPTGANLFVYYLPGSLTDADLATAFAPFGEVLSAKVYYDRDTGESKGFGFVSYSKPDEAEAAISSMNGFFIGQKRLKVVRKRGQQTDRCLDSS 411
            T+  Q T    S P ++   +      Q+ KLF+GM PK A E   R VF P G   +IY++R    G SKGCAF++Y+   SAS AIEA +  + M  G   LVV  AD RR     A       R+   +    +  L             GG+IP       Q +        GA A     +PG         G P  +   NP   T++YY PY  +++    +G ++ P   G  P     + +P  G      +G  GA                        R A Q  GP GANLF+Y+LP  LTDADLATAFAPFG V+SAKV+ D++TGESKGFGFVSY     A+AAI+SMNGF IG KRLKV  KR    D   D S
Sbjct:   96 TLHNQVTLPMSSNPLQVRPAEGQAGASQEHKLFIGMIPKHADEASIREVFAPHGAIEEIYILRHPATGQSKGCAFLKYKDRHSASSAIEAFNGIYTMDRGTAPLVVKFADSRRQRIQRA-------RNQAATAAAAYWQLPP-----------GGTIPFPQIQQIQQQYMQQMQVFGAQALGGQTSPG---------GSP--IPATNP--ATFMYYNPYAFAAA----SGYNSFPPAGGPAPFPLDPLATPMPG------MGLSGA------------------------RAATQLEGPAGANLFIYHLPHDLTDADLATAFAPFGTVISAKVFMDKNTGESKGFGFVSYDSVQAADAAIASMNGFQIGSKRLKVQHKRVHNRDEYDDES 420

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BLAST of mRNA_E-siliculosus-1a_F_contig1176.1137.1 vs. uniprot
Match: A0A484EFV5_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EFV5_BRELC)

HSP 1 Score: 174 bits (442), Expect = 4.130e-45
Identity = 137/355 (38.59%), Postives = 174/355 (49.01%), Query Frame = 0

Query:   51 QKKKLFVGMAPKSAYEEDYRAVFEPFGTPIDIYVIRD-RNGFSKGCAFVRYESVKSASDAIEALHDKHIMPGGFRTLVVTVADDRRGPQTSAVGTTTTRRDAVGSGDGLFRSLSRPSSFMGSDSGGGGSIPSLGNVVGQNRSTVTAPQAGATAFAPTVAPGSGXXXXQLSGMPYFLCGGNPPQGTYVYY-PYVPSSSVQHDTGSSAAPVGIGAKPHHAFSVGSPAVGNNDRCELGARGAQEDGYTGDRTVRKFGTGGPEERGRRWAKQSVGPTGANLFVYYLPGSLTDADLATAFAPFGEVLSAKVYYDRDTGESKGFGFVSYSKPDEAEAAISSMNGFFIGQKRLKVVRKRGQQ 403
            Q+ KLF+GM PK+A E   R VFE FGT  ++Y++R    G SKGCAF++++   SA  AIE ++    M  G   LVV  AD RR     A      R  AV +           +S+     G G + P L  +  Q    + A  A A A       G G       G      G   P  +++YY PY  +++               A P+       P + + D    G  G +  G  GD             +  R   Q  GPTGANLF+Y+LP  LTDADLATAFAPFG V+SAKVY D+ TGESKGFGFVSY   + A+AAI+SMNGF IG KRLKV  KR  Q
Sbjct:  116 QEHKLFIGMIPKTADENAIREVFELFGTIDEVYILRHPATGQSKGCAFLKFKDRTSALAAIEEVNGNVTMDRGTSPLVVKFADSRRQRLQRA------RNMAVAT-----------NSYWPLHPGAGLAFPQLQQLQQQYMQQMQAFGAQAAAGLNPAIAGLGSPMGGTVG------GAGSPTNSFMYYNPYGFAANA--------------ANPYGFMPAVGPTMESFDMQASGT-GLELQGSGGDAAA----------KASRATSQLEGPTGANLFIYHLPHDLTDADLATAFAPFGTVISAKVYMDKITGESKGFGFVSYDSAEAADAAIASMNGFQIGSKRLKVQHKRIHQ 422

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BLAST of mRNA_E-siliculosus-1a_F_contig1176.1137.1 vs. uniprot
Match: A0A3M6V9P8_9STRA (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6V9P8_9STRA)

HSP 1 Score: 171 bits (434), Expect = 3.360e-44
Identity = 138/365 (37.81%), Postives = 177/365 (48.49%), Query Frame = 0

Query:   51 QKKKLFVGMAPKSAYEEDYRAVFEPFGTPIDIYVIRD-RNGFSKGCAFVRYESVKSASDAIEALHDKHIMPGGFRTLVVTVADDRRGPQTSAVGTTTTRRDAVGSGDGLFRSLSRPSS-FMGSDSGGGGSIPSLGNVVGQNRSTVTAPQAGATAFAPTVAPGSGXXXXQLSGMPYFLCGGNPPQGTYVYY-PYVPSSSVQHDTGSSAAPVGIGAKPHHAFSVGSPAVGNNDRCELGARGAQEDGYTGDRTVRKFGTGGPEERGRRWAKQSVGPTGANLFVYYLPGSLTDADLATAFAPFGEVLSAKVYYDRDTGESKGFGFVSYSKPDEAEAAISSMNGFFIGQKRLKVVRKRGQQTDRCLDSSS 412
            Q+ KLF+GM PK+A E   R VFE FG   ++Y++R    G SKGCAF++++   SA  AIE ++    M  G   LVV  AD RR     A                  R+L+  ++ +     G G + P L  +  Q    + A       F    A G       L+       G   P  +++YY PY         TG+ A P G G         G P VG     ++ + G        +++V        E +  R   Q  GPTGANLF+Y+LP  LTDADLATAFAPFG V+SAKVY D+ T ESKGFGFVSY   D A+AAI+SMNGF IG KRLKV  KR  Q    L   S
Sbjct:   77 QEHKLFIGMIPKTAEESAIREVFELFGNIEEVYILRHPATGQSKGCAFLKFKERSSALAAIEQVNGNVTMDRGTSPLVVKFADSRRQRLQRA------------------RNLAAAANAYWPLPPGAGMAFPQLQQLQQQYMQQMQA-------FGVQAAAGLNPAIAGLNSPVGSTGGMRSPTNSFMYYNPY------GFATGA-AGPYGFG---------GMPNVGGGAGLDMQSSGMVVGMDMPNQSV--------EAKASRTTSQLEGPTGANLFIYHLPHDLTDADLATAFAPFGTVISAKVYMDKITSESKGFGFVSYDSADAADAAIASMNGFQIGTKRLKVQHKRIHQRSDYLGGGS 392

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BLAST of mRNA_E-siliculosus-1a_F_contig1176.1137.1 vs. uniprot
Match: H3GY92_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GY92_PHYRM)

HSP 1 Score: 172 bits (436), Expect = 3.450e-44
Identity = 138/367 (37.60%), Postives = 177/367 (48.23%), Query Frame = 0

Query:   51 QKKKLFVGMAPKSAYEEDYRAVFEPFGTPIDIYVIRD-RNGFSKGCAFVRYESVKSASDAIEALHDKHIMPGGFRTLVVTVADDRRGPQTSAVGTTTTRRDAVGSGDGLFRSLSRPSS-FMGSDSGGGGSIPSLGNVVGQNRSTVTAPQAGATAFAPTVAPGSGXXXXQLSGMPYFLCGGNPPQGTYVYYPYVPSSSVQHDTGSSAAPVGIGAKPH---HAFSVGSPAVGNNDRCELGARGAQEDGYTGDRTVRKFGTGGPEERGRRWAKQSVGPTGANLFVYYLPGSLTDADLATAFAPFGEVLSAKVYYDRDTGESKGFGFVSYSKPDEAEAAISSMNGFFIGQKRLKVVRKRGQQTDRCLDSSS 412
            Q+ KLF+GM PK+A E   R VFE FG   ++Y++R    G SKGCAF++++   SA  AIE ++    M  G   LVV  AD RR     A                  R+L+  ++ +     G G + P L ++  Q    + A  A A A       G G      +G P     G+P      Y PY  + +       +AAP      P+     F + S  +G     + G   A                     +  R   Q  GPTGANLF+Y+LP  LTDADLATAFAPFG V+SAKVY D+ TGESKGFGFVSY   D A+AAI+SMNGF IG KRLKV  KR  Q +  L  SS
Sbjct:  116 QEHKLFIGMIPKTADEAAIRDVFELFGAIEEVYILRHPATGQSKGCAFLKFKERTSALAAIEDVNGNVTMDRGTSPLVVKFADSRRQRLQRA------------------RNLAAAANAYWPLPPGAGMAFPQLQHLQQQYMQQMQAFGAQAAAGLNPAVAGMGSPVGATAGSP-----GSPTNSFMYYNPYGFAGA------GAAAPXXXXXXPNVGGAGFDMQSSGLGAG--LDQGVEAAA--------------------KASRTTSQLEGPTGANLFIYHLPHDLTDADLATAFAPFGTVISAKVYMDKITGESKGFGFVSYDSADAADAAIASMNGFQIGTKRLKVQHKRIHQRNDYLGGSS 431

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BLAST of mRNA_E-siliculosus-1a_F_contig1176.1137.1 vs. uniprot
Match: A0A1V9ZMV5_9STRA (CUG-BP-and ETR-3-like factor n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZMV5_9STRA)

HSP 1 Score: 171 bits (434), Expect = 6.380e-44
Identity = 141/384 (36.72%), Postives = 178/384 (46.35%), Query Frame = 0

Query:   24 TMAEQHTDDAFSRPRELLLGDHAHTDQQKKKLFVGMAPKSAYEEDYRAVFEPFGTPIDIYVIRD-RNGFSKGCAFVRYESVKSASDAIEALHDKHIMPGGFRTLVVTVADDRRGPQTSAVGTTTTRRDAVGSGDGLFRSLSRPSSFMGSDSGGGGSIPSLGNVVGQNRSTVTAPQAGATAFAPTVAPGSGXXXXQLSGMPYFLCGGNPPQGTYVYYPYVPSSSVQHDTGSSAAPVGIGAK-PHHAFSVGSPAVGNNDRCELGARGAQEDGYTGDRTVRKFGTGGPEERGRRWAKQSVGPTGANLFVYYLPGSLTDADLATAFAPFGEVLSAKVYYDRDTGESKGFGFVSYSKPDEAEAAISSMNGFFIGQKRLKVVRKRGQQTD 405
            T+  Q T    S P ++   +      Q+ KLF+GM PK A E   R VF P G   +IY++R    G SKGCAF++++   SAS AIEA +  + M  G   LVV  AD RR     A       R+   +    +  L           GG    P L  +  Q    + A   GA A A  ++PGS                 NP    ++YY     ++    TG    P G+    P  A +   P          GA  A                      G R A Q  GP GANLF+Y+LP  LTDADLATAFAPFG V+SAKV+ D++TGESKGFGFVSY     A+AAI+SMNGF IG KRLKV  KR  Q +
Sbjct:  152 TLHNQVTLPMSSNPLQVRPAEGQAGASQEHKLFIGMIPKHADESSIREVFAPHGAIEEIYILRHPATGQSKGCAFLKFKDRHSASTAIEAFNGTYTMDRGTAPLVVKFADSRRQRIQRA-------RNQAATAAAAYWQL---------PPGGTIPFPQLQQIQQQYMQQMQA--FGAQALAGQMSPGSSPSPAA-----------NP--AAFMYYNQYAFAAASGYTGF---PSGVAPPFPLDALATAVP----------GAAAAS---------------------GARAATQLEGPAGANLFIYHLPHDLTDADLATAFAPFGTVISAKVFMDKNTGESKGFGFVSYDSVAAADAAIASMNGFQIGSKRLKVQHKRVHQRE 470

The following BLAST results are available for this feature:

BLAST of mRNA_E-siliculosus-1a_F_contig1176.1137.1 vs. uniprot

BLAST of mRNA_E-siliculosus-1a_F_contig1176.1137.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5K0Y1_9PHAE	0.000e+0	92.32	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7FV61_ECTSI	1.360e-281	97.72	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
D7FV60_ECTSI	1.540e-65	43.25	Trinucleotide repeat containing 4, isoform CRA_d n...	[more]
D0NNK0_PHYIT	1.880e-47	39.84	CUG-BP-and ETR-3-like factor, putative n=17 Tax=Ph...	[more]
A0A7S4QD22_9STRA	2.300e-46	39.13	Hypothetical protein n=1 Tax=Ditylum brightwellii ...	[more]
A0A1W0A7F0_9STRA	2.030e-45	36.92	CUG-BP-and ETR-3-like factor n=1 Tax=Thraustotheca...	[more]
A0A484EFV5_BRELC	4.130e-45	38.59	Uncharacterized protein n=1 Tax=Bremia lactucae Ta...	[more]
A0A3M6V9P8_9STRA	3.360e-44	37.81	Uncharacterized protein n=1 Tax=Peronospora effusa...	[more]
H3GY92_PHYRM	3.450e-44	37.60	Uncharacterized protein n=1 Tax=Phytophthora ramor...	[more]
A0A1V9ZMV5_9STRA	6.380e-44	36.72	CUG-BP-and ETR-3-like factor n=1 Tax=Achlya hypogy...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 324..397 e-value: 1.4E-24 score: 97.7 coord: 54..129 e-value: 6.5E-17 score: 72.2
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 325..395 e-value: 2.1E-19 score: 69.1 coord: 55..118 e-value: 1.6E-12 score: 47.1
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 53..133 score: 15.613
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 323..401 score: 17.592
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 43..139 e-value: 4.2E-22 score: 80.1
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 305..399 e-value: 5.4E-25 score: 89.7
None	No IPR available	PANTHER	PTHR24012	RNA BINDING PROTEIN	coord: 51..403
None	No IPR available	PANTHER	PTHR24012:SF686	CUGBP ELAV-LIKE FAMILY MEMBER 1	coord: 51..403
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 51..402

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E-siliculosus-1a_F_contig1176	contig	E-siliculosus-1a_F_contig1176:11588..13919 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_E-siliculosus-1a_F_contig1176.1137.1	mRNA_E-siliculosus-1a_F_contig1176.1137.1	Ectocarpus siliculosus Ec863f_EcPH12_90f female	mRNA	E-siliculosus-1a_F_contig1176 11588..13919 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1176.1137.1 ID=prot_E-siliculosus-1a_F_contig1176.1137.1|Name=mRNA_E-siliculosus-1a_F_contig1176.1137.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=508bp
GPFSYEHRETAPPWSVGWLPTSPTMAEQHTDDAFSRPRELLLGDHAHTDQ
QKKKLFVGMAPKSAYEEDYRAVFEPFGTPIDIYVIRDRNGFSKGCAFVRY
ESVKSASDAIEALHDKHIMPGGFRTLVVTVADDRRGPQTSAVGTTTTRRD
AVGSGDGLFRSLSRPSSFMGSDSGGGGSIPSLGNVVGQNRSTVTAPQAGA
TAFAPTVAPGSGPSSGQLSGMPYFLCGGNPPQGTYVYYPYVPSSSVQHDT
GSSAAPVGIGAKPHHAFSVGSPAVGNNDRCELGARGAQEDGYTGDRTVRK
FGTGGPEERGRRWAKQSVGPTGANLFVYYLPGSLTDADLATAFAPFGEVL
SAKVYYDRDTGESKGFGFVSYSKPDEAEAAISSMNGFFIGQKRLKVVRKR
GQQTDRCLDSSSSSNSNNNINNGNNSNNNNNNIGRPSDPGYAAGDGSCGL
ARPDSGASGNAGTNVVVGSGMNNGNGDGTSHRSILGSGSQADLEFFTPEG
LLGPSMTR

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR035979	RBD_domain_sf
IPR012677	Nucleotide-bd_a/b_plait_sf
IPR000504	RRM_dom