mRNA_E-siliculosus-1a_F_contig1176.1137.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1176.1137.1 vs. uniprot
Match: A0A6H5K0Y1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0Y1_9PHAE) HSP 1 Score: 887 bits (2293), Expect = 0.000e+0 Identity = 469/508 (92.32%), Postives = 478/508 (94.09%), Query Frame = 1
Query: 1 GPFSYEHRETAPPWSVGWLPTSPTMAEQHTDDAFSRPRELLLGDHAHTDQQKKKLFVGMAPKSAYEEDYRAVFEPFGTPIDIYVIRDRNGFSKGCAFVRYESVKSASDAIEALHDKHIMPGGFRTLVVTVADDRRGPQTSAVGTTTTRRDAVGSGDGLFRSLSRPSSFMGSDSGGGGSIPSLGNVVGQNRSTVTAPQAGATAFAPTVAPGSGXXXXQLSGMPYFLCGGNPPQGTYVYYPYVPSSSVQHDTGSSAAPVGIGAKPHHAFSVGSPAVGNNDRCELGARGAQEDGYTGDRTVRKFGTGGPEERGRRWAKQSVGPTGANLFVYYLPGSLTDADLATAFAPFGEVLSAKVYYDRDTGESKGFGFVSYSKPDEAEAAISSMNGFFIGQKRLKVVRKRGQQTDRCLDSSSXXXXXXXXXXXXXXXXXXXXIGRPSDPGYAAGDGSCGLARPDSGASGNAGTNVVVGSGMNNGNGDGTSHRSILGSGSQADLEFFTPEGLLGPSMTR 1524
GPFS+EHRETAP WSVGWLPTSPTMAEQH DDAFSRPRE+LLGDHAHTDQQKKKLFVGMAPKSAYEEDYRAVFEPFGTPIDIYVIRDRNGFSKGCAFVRYESV+SASDAIEALHDK+IMPGGFRTLVVTVADDRRGPQTSAVGTTTTRRDAVGSGD L RSLSRPSSFMGSDS GGSIPS GN+VGQNRSTV APQAGATA APT+APGS LSGMPYFLCGGNPPQGTYVYYPYVPSSSVQHDTG S APVGIGAKPHHAFSVGSPAVGNNDRCELGARGAQEDGYTGDRTVRKFGTGGPEERGRRWAKQSVGPTGANLFVYYLPGSLTDADLATAFAPFGEVLSAKVYYDRDTGESKGFGFVSYSKPDEAEAAISSMNGFFIGQKRLKVVRKRGQQTDRCLDSS XXXXXXXXXXXXXXX GRP DPGYAA DGSCGLARPD GASG AG+NVVVGSG+NNGNGDGTSHRSI GSGSQADL+F TPEGLLGPSMTR
Sbjct: 10 GPFSFEHRETAPTWSVGWLPTSPTMAEQHNDDAFSRPREMLLGDHAHTDQQKKKLFVGMAPKSAYEEDYRAVFEPFGTPIDIYVIRDRNGFSKGCAFVRYESVRSASDAIEALHDKYIMPGGFRTLVVTVADDRRGPQTSAVGTTTTRRDAVGSGDVLLRSLSRPSSFMGSDSSVGGSIPSFGNLVGQNRSTVAAPQAGATAVAPTIAPGSRPSSGLLSGMPYFLCGGNPPQGTYVYYPYVPSSSVQHDTGLSVAPVGIGAKPHHAFSVGSPAVGNNDRCELGARGAQEDGYTGDRTVRKFGTGGPEERGRRWAKQSVGPTGANLFVYYLPGSLTDADLATAFAPFGEVLSAKVYYDRDTGESKGFGFVSYSKPDEAEAAISSMNGFFIGQKRLKVVRKRGQQTDRCLDSSXXXXXXXXXXXXXXXXS-----GRPRDPGYAASDGSCGLARPDRGASGIAGSNVVVGSGVNNGNGDGTSHRSIFGSGSQADLDF-TPEGLLGPSMTR 511
BLAST of mRNA_E-siliculosus-1a_F_contig1176.1137.1 vs. uniprot
Match: D7FV61_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV61_ECTSI) HSP 1 Score: 777 bits (2006), Expect = 1.360e-281 Identity = 385/394 (97.72%), Postives = 387/394 (98.22%), Query Frame = 1
Query: 1 GPFSYEHRETAPPWSVGWLPTSPTMAEQHTDDAFSRPRELLLGDHAHTDQQKKKLFVGMAPKSAYEEDYRAVFEPFGTPIDIYVIRDRNGFSKGCAFVRYESVKSASDAIEALHDKHIMPGGFRTLVVTVADDRRGPQTSAVGTTTTRRDAVGSGDGLFRSLSRPSSFMGSDSGGGGSIPSLGNVVGQNRSTVTAPQAGATAFAPTVAPGSGXXXXQLSGMPYFLCGGNPPQGTYVYYPYVPSSSVQHDTGSSAAPVGIGAKPHHAFSVGSPAVGNNDRCELGARGAQEDGYTGDRTVRKFGTGGPEERGRRWAKQSVGPTGANLFVYYLPGSLTDADLATAFAPFGEVLSAKVYYDRDTGESKGFGFVSYSKPDEAEAAISSMNGFFIGQKRL 1182
GPFSYEHRETAPPWSVGWLPTSPTMAEQHTDDAFSRPRELLLGDHAHTDQQKKKLFVGMAPKSAYEEDYRAVFEPFGTPIDIYVIRDRNGFSKGCAFVRYESVKSASDAIEALHDKHIMPGGFRTLVVTVADDRRGPQTSAVGTTTTRRDAVGSGDGLFR+LSRPSSFMGSDSGGGG+IPSLGNVVGQNRSTVTAPQAGATAFAPTVAPGSG LSGMPYFLCGGNPPQGTYVYYPYVPSSSVQHDTGSSAAP GIGAKPHHAFSVGSPAVGNNDRCELGARGAQEDGYTGDRTVRKFGTGGPEERGRRWAKQSVGPTGANLFVYYLPGSLTDADLATAFAPFGEVLSAKVYYDRDTGESKGFGFVSYSKPDEAEAAISSMNGFFIGQK L
Sbjct: 7 GPFSYEHRETAPPWSVGWLPTSPTMAEQHTDDAFSRPRELLLGDHAHTDQQKKKLFVGMAPKSAYEEDYRAVFEPFGTPIDIYVIRDRNGFSKGCAFVRYESVKSASDAIEALHDKHIMPGGFRTLVVTVADDRRGPQTSAVGTTTTRRDAVGSGDGLFRALSRPSSFMGSDSGGGGTIPSLGNVVGQNRSTVTAPQAGATAFAPTVAPGSGPSSGLLSGMPYFLCGGNPPQGTYVYYPYVPSSSVQHDTGSSAAPAGIGAKPHHAFSVGSPAVGNNDRCELGARGAQEDGYTGDRTVRKFGTGGPEERGRRWAKQSVGPTGANLFVYYLPGSLTDADLATAFAPFGEVLSAKVYYDRDTGESKGFGFVSYSKPDEAEAAISSMNGFFIGQKFL 400
BLAST of mRNA_E-siliculosus-1a_F_contig1176.1137.1 vs. uniprot
Match: D7FV60_ECTSI (Trinucleotide repeat containing 4, isoform CRA_d n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FV60_ECTSI) HSP 1 Score: 229 bits (584), Expect = 1.540e-65 Identity = 157/363 (43.25%), Postives = 192/363 (52.89%), Query Frame = 1
Query: 148 QQKKKLFVGMAPKSAYEEDYRAVFEPFGTPIDIYVIRDRNGFSKGCAFVRYESVKSASDAIEALHDKHIMPGGFRTLVVTVADDRRGPQTSAVGTTTTRRDAVGSGDGLFRSLSRPSSFMGSDSGGGGSIPSLGNVVGQNRSTVTAPQAGATAFAPTVAPGSGXXXXQLSGMPYFLCGGN------PPQGTYVYYPYVPSSSVQHDTGSSAAPVGIGAKPHHAFSVGSPAVGNNDRCELGARGAQEDGYTGDRTVRKFGTGGPEERGRRWAKQSVGPTGANLFVYYLPGSLTDADLATAFAPFGEVLSAKVYYDRDTGESKGFGFVSYSKPDEAEAAISSMNGFFIGQKRLKVVRKR-GQQTD 1215
+Q+ KLFVGMAPKSA E++ RAVF P+GT +I+VIR+++G +KGCAFV+Y + +SA DAIEALH+++ M GG R LVV AD++RG Q +A G GL S R S ++GG P G G A P PG +SGMPY + G P QG+YVYYPY G+ P G + SP+ G + + GP GANLF+Y+LP L+DADLATAFAPFG VLSAKVY DR +GESKGFGFVSYS P AEAAI+ MNGF IG KRLKV KR GQ TD
Sbjct: 128 EQENKLFVGMAPKSANEDEIRAVFAPYGTLREIHVIRNQDGTNKGCAFVKYTTRQSALDAIEALHEQYTMQGGPRPLVVKFADNKRGTQAAA-----------GRLGGLIGSPGRHGSGPHPEAGGWMGHPGAG---------------GQGAGYPYPMPGPPMSPHMMSGMPYGMAYGGGQAPGAPAQGSYVYYPY----------GAPGYPPQPGGPGQYHSGPPSPSRGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-XXXTRPAEGPPGANLFIYHLPQDLSDADLATAFAPFGHVLSAKVYIDRASGESKGFGFVSYSLPSHAEAAIAQMNGFQIGSKRLKVQHKRRGQSTD 453
BLAST of mRNA_E-siliculosus-1a_F_contig1176.1137.1 vs. uniprot
Match: D0NNK0_PHYIT (CUG-BP-and ETR-3-like factor, putative n=17 Tax=Phytophthora TaxID=4783 RepID=D0NNK0_PHYIT) HSP 1 Score: 181 bits (459), Expect = 1.880e-47 Identity = 145/364 (39.84%), Postives = 184/364 (50.55%), Query Frame = 1
Query: 151 QKKKLFVGMAPKSAYEEDYRAVFEPFGTPIDIYVIRD-RNGFSKGCAFVRYESVKSASDAIEALHDKHIMPGGFRTLVVTVADDRRGPQTSAVGTTTTRRDAVGSGDGLFRSLSRPSS-FMGSDSGGGGSIPSLGNVVGQNRSTVTAPQAGATA-FAPTVAPGSGXXXXQLSGMPYFLCGGNPPQGTYVYYPYVPSSSVQHDTGSSAAPVGIGAKPHHAFSVGSPAVGNNDRCELGARGAQEDGYTGDRTVRKFGTGGPEERGRRWAKQSVGPTGANLFVYYLPGSLTDADLATAFAPFGEVLSAKVYYDRDTGESKGFGFVSYSKPDEAEAAISSMNGFFIGQKRLKVVRKRGQQTDRCLDSS 1233
Q+ KLF+GM PK+A E R VFE FG+ ++Y++R G SKGCAF++++ SA AIE ++ M G LVV AD RR A R+L+ ++ + G G + P L + Q + A A A A +PTVA G G + P G+P Y PY ++ AAP G G P+ A A G + + LGA ++ G G + R Q GPTGANLF+Y+LP LTDADLATAFAPFG V+SAKVY D+ TGESKGFGFVSY D A+AAI+SMNGF IG KRLKV KR Q L S
Sbjct: 119 QEHKLFIGMIPKTADEAAIRDVFELFGSIEEVYILRHPATGQSKGCAFLKFKERSSALAAIEEVNGIVTMDRGTSPLVVKFADSRRQRLQRA------------------RNLAAATNAYWPLPPGAGLAFPQLQQLQQQYMQQMQAFGAQAAAGMSPTVA-GLGSPVGATASGP-----GSPTNSFMYYNPYGFAAGA-------AAPYGFGGMPNVA------AAGFDMQTGLGA------------SLDLQGQGAEAAKASRTTSQLEGPTGANLFIYHLPHDLTDADLATAFAPFGTVISAKVYMDKITGESKGFGFVSYDSADAADAAIASMNGFQIGTKRLKVQHKRIHQRSDYLGGS 433
BLAST of mRNA_E-siliculosus-1a_F_contig1176.1137.1 vs. uniprot
Match: A0A7S4QD22_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QD22_9STRA) HSP 1 Score: 181 bits (460), Expect = 2.300e-46 Identity = 144/368 (39.13%), Postives = 179/368 (48.64%), Query Frame = 1
Query: 160 KLFVGMAPKSAYEEDYRAVFEPFGTPIDIYVIRDRNGFSKGCAFVRYESVKSASDAIEALHDKHIMPGGFRTLVVTVADDRRGPQTSAVGTTTTRRDAVGSGDGLFRSLSRPSSFMGSDSGGGGSIPSL-GNVVGQNRSTVTAPQAGATAFAPTVAPGSGXXXXQLSGMPYFLCGGNPPQ---GTYVYYPYVPSSS-----------VQHDTGSSAAPVGIGAKPHHAFSVGS--PAVGNNDRCELGARGAQEDGYTGDRTVRKFGTGGPEERGRRWAKQSVGPTGANLFVYYLPGSLTDADLATAFAPFGEVLSAKVYYDRDTGESKGFGFVSYSKPDEAEAAISSMNGFFIGQKRLKVVRKRGQQT 1212
KLFVGM P+ E+D R +F PFG IY+IR+ +G KGCAFV++ +SA AI LH ++ M G R+LVV AD +G + ++ RR+A + + P S SG GG P + G G + PQAG A +SG + G PPQ G Y + + P SS +AAP G+ FS G P + ++ RG DG T + P E GP GANLF+Y+LP LTDADLATAF PFG V+SAKVY DR TGESKGFGFVSY AE AI MNGF IG KRLKV KR +T
Sbjct: 281 KLFVGMLPRKTTEKDLREIFSPFGDISAIYLIRNDDGTQKGCAFVKFHQRESAQAAINTLHGQYCMEGMRRSLVVKYAD--KGYRRASRRYQAARREAYE--NAVMHGHPNPGSVFYVPSGPGGPPPQMPGFPPGGPMAYPQPPQAGPHAEGTQGPSPPMGISPPVSGTGQYSVG-QPPQYATGAYPHGSHTPPSSQXXXXXXXXXXXXXXXXXAAAPYGM----PQGFSGGQAGPGGAHQNKPRFYGRGQNRDGQLPHATTPR-----PRE----------GPAGANLFIYHLPHDLTDADLATAFNPFGNVISAKVYVDRYTGESKGFGFVSYDSVISAEHAIEQMNGFQIGTKRLKVQHKRVTKT 624
BLAST of mRNA_E-siliculosus-1a_F_contig1176.1137.1 vs. uniprot
Match: A0A1W0A7F0_9STRA (CUG-BP-and ETR-3-like factor n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A7F0_9STRA) HSP 1 Score: 174 bits (441), Expect = 2.030e-45 Identity = 144/390 (36.92%), Postives = 184/390 (47.18%), Query Frame = 1
Query: 70 TMAEQHTDDAFSRPRELLLGDHAHTDQQKKKLFVGMAPKSAYEEDYRAVFEPFGTPIDIYVIRD-RNGFSKGCAFVRYESVKSASDAIEALHDKHIMPGGFRTLVVTVADDRRGPQTSAVGTTTTRRDAVGSGDGLFRSLSRPSSFMGSDSGGGGSIPSLGNVVGQNRSTVTAPQAGATAFAPTVAPGSGXXXXQLSGMPYFLCGGNPPQGTYVYY-PYVPSSSVQHDTGSSAAPVGIGAKPHHAFSVGSPAVGNNDRCELGARGAQEDGYTGDRTVRKFGTGGPEERGRRWAKQSVGPTGANLFVYYLPGSLTDADLATAFAPFGEVLSAKVYYDRDTGESKGFGFVSYSKPDEAEAAISSMNGFFIGQKRLKVVRKRGQQTDRCLDSS 1233
T+ Q T S P ++ + Q+ KLF+GM PK A E R VF P G +IY++R G SKGCAF++Y+ SAS AIEA + + M G LVV AD RR A R+ + + L GG+IP Q + GA A +PG G P + NP T++YY PY +++ +G ++ P G P + +P G +G GA R A Q GP GANLF+Y+LP LTDADLATAFAPFG V+SAKV+ D++TGESKGFGFVSY A+AAI+SMNGF IG KRLKV KR D D S
Sbjct: 96 TLHNQVTLPMSSNPLQVRPAEGQAGASQEHKLFIGMIPKHADEASIREVFAPHGAIEEIYILRHPATGQSKGCAFLKYKDRHSASSAIEAFNGIYTMDRGTAPLVVKFADSRRQRIQRA-------RNQAATAAAAYWQLPP-----------GGTIPFPQIQQIQQQYMQQMQVFGAQALGGQTSPG---------GSP--IPATNP--ATFMYYNPYAFAAA----SGYNSFPPAGGPAPFPLDPLATPMPG------MGLSGA------------------------RAATQLEGPAGANLFIYHLPHDLTDADLATAFAPFGTVISAKVFMDKNTGESKGFGFVSYDSVQAADAAIASMNGFQIGSKRLKVQHKRVHNRDEYDDES 420
BLAST of mRNA_E-siliculosus-1a_F_contig1176.1137.1 vs. uniprot
Match: A0A484EFV5_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EFV5_BRELC) HSP 1 Score: 174 bits (442), Expect = 4.130e-45 Identity = 137/355 (38.59%), Postives = 174/355 (49.01%), Query Frame = 1
Query: 151 QKKKLFVGMAPKSAYEEDYRAVFEPFGTPIDIYVIRD-RNGFSKGCAFVRYESVKSASDAIEALHDKHIMPGGFRTLVVTVADDRRGPQTSAVGTTTTRRDAVGSGDGLFRSLSRPSSFMGSDSGGGGSIPSLGNVVGQNRSTVTAPQAGATAFAPTVAPGSGXXXXQLSGMPYFLCGGNPPQGTYVYY-PYVPSSSVQHDTGSSAAPVGIGAKPHHAFSVGSPAVGNNDRCELGARGAQEDGYTGDRTVRKFGTGGPEERGRRWAKQSVGPTGANLFVYYLPGSLTDADLATAFAPFGEVLSAKVYYDRDTGESKGFGFVSYSKPDEAEAAISSMNGFFIGQKRLKVVRKRGQQ 1209
Q+ KLF+GM PK+A E R VFE FGT ++Y++R G SKGCAF++++ SA AIE ++ M G LVV AD RR A R AV + +S+ G G + P L + Q + A A A A G G G G P +++YY PY +++ A P+ P + + D G G + G GD + R Q GPTGANLF+Y+LP LTDADLATAFAPFG V+SAKVY D+ TGESKGFGFVSY + A+AAI+SMNGF IG KRLKV KR Q
Sbjct: 116 QEHKLFIGMIPKTADENAIREVFELFGTIDEVYILRHPATGQSKGCAFLKFKDRTSALAAIEEVNGNVTMDRGTSPLVVKFADSRRQRLQRA------RNMAVAT-----------NSYWPLHPGAGLAFPQLQQLQQQYMQQMQAFGAQAAAGLNPAIAGLGSPMGGTVG------GAGSPTNSFMYYNPYGFAANA--------------ANPYGFMPAVGPTMESFDMQASGT-GLELQGSGGDAAA----------KASRATSQLEGPTGANLFIYHLPHDLTDADLATAFAPFGTVISAKVYMDKITGESKGFGFVSYDSAEAADAAIASMNGFQIGSKRLKVQHKRIHQ 422
BLAST of mRNA_E-siliculosus-1a_F_contig1176.1137.1 vs. uniprot
Match: A0A3M6V9P8_9STRA (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6V9P8_9STRA) HSP 1 Score: 171 bits (434), Expect = 3.360e-44 Identity = 138/365 (37.81%), Postives = 177/365 (48.49%), Query Frame = 1
Query: 151 QKKKLFVGMAPKSAYEEDYRAVFEPFGTPIDIYVIRD-RNGFSKGCAFVRYESVKSASDAIEALHDKHIMPGGFRTLVVTVADDRRGPQTSAVGTTTTRRDAVGSGDGLFRSLSRPSS-FMGSDSGGGGSIPSLGNVVGQNRSTVTAPQAGATAFAPTVAPGSGXXXXQLSGMPYFLCGGNPPQGTYVYY-PYVPSSSVQHDTGSSAAPVGIGAKPHHAFSVGSPAVGNNDRCELGARGAQEDGYTGDRTVRKFGTGGPEERGRRWAKQSVGPTGANLFVYYLPGSLTDADLATAFAPFGEVLSAKVYYDRDTGESKGFGFVSYSKPDEAEAAISSMNGFFIGQKRLKVVRKRGQQTDRCLDSSS 1236
Q+ KLF+GM PK+A E R VFE FG ++Y++R G SKGCAF++++ SA AIE ++ M G LVV AD RR A R+L+ ++ + G G + P L + Q + A F A G L+ G P +++YY PY TG+ A P G G G P VG ++ + G +++V E + R Q GPTGANLF+Y+LP LTDADLATAFAPFG V+SAKVY D+ T ESKGFGFVSY D A+AAI+SMNGF IG KRLKV KR Q L S
Sbjct: 77 QEHKLFIGMIPKTAEESAIREVFELFGNIEEVYILRHPATGQSKGCAFLKFKERSSALAAIEQVNGNVTMDRGTSPLVVKFADSRRQRLQRA------------------RNLAAAANAYWPLPPGAGMAFPQLQQLQQQYMQQMQA-------FGVQAAAGLNPAIAGLNSPVGSTGGMRSPTNSFMYYNPY------GFATGA-AGPYGFG---------GMPNVGGGAGLDMQSSGMVVGMDMPNQSV--------EAKASRTTSQLEGPTGANLFIYHLPHDLTDADLATAFAPFGTVISAKVYMDKITSESKGFGFVSYDSADAADAAIASMNGFQIGTKRLKVQHKRIHQRSDYLGGGS 392
BLAST of mRNA_E-siliculosus-1a_F_contig1176.1137.1 vs. uniprot
Match: H3GY92_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GY92_PHYRM) HSP 1 Score: 172 bits (436), Expect = 3.450e-44 Identity = 138/367 (37.60%), Postives = 177/367 (48.23%), Query Frame = 1
Query: 151 QKKKLFVGMAPKSAYEEDYRAVFEPFGTPIDIYVIRD-RNGFSKGCAFVRYESVKSASDAIEALHDKHIMPGGFRTLVVTVADDRRGPQTSAVGTTTTRRDAVGSGDGLFRSLSRPSS-FMGSDSGGGGSIPSLGNVVGQNRSTVTAPQAGATAFAPTVAPGSGXXXXQLSGMPYFLCGGNPPQGTYVYYPYVPSSSVQHDTGSSAAPVGIGAKPH---HAFSVGSPAVGNNDRCELGARGAQEDGYTGDRTVRKFGTGGPEERGRRWAKQSVGPTGANLFVYYLPGSLTDADLATAFAPFGEVLSAKVYYDRDTGESKGFGFVSYSKPDEAEAAISSMNGFFIGQKRLKVVRKRGQQTDRCLDSSS 1236
Q+ KLF+GM PK+A E R VFE FG ++Y++R G SKGCAF++++ SA AIE ++ M G LVV AD RR A R+L+ ++ + G G + P L ++ Q + A A A A G G +G P G+P Y PY + + +AAP P+ F + S +G + G A + R Q GPTGANLF+Y+LP LTDADLATAFAPFG V+SAKVY D+ TGESKGFGFVSY D A+AAI+SMNGF IG KRLKV KR Q + L SS
Sbjct: 116 QEHKLFIGMIPKTADEAAIRDVFELFGAIEEVYILRHPATGQSKGCAFLKFKERTSALAAIEDVNGNVTMDRGTSPLVVKFADSRRQRLQRA------------------RNLAAAANAYWPLPPGAGMAFPQLQHLQQQYMQQMQAFGAQAAAGLNPAVAGMGSPVGATAGSP-----GSPTNSFMYYNPYGFAGA------GAAAPXXXXXXPNVGGAGFDMQSSGLGAG--LDQGVEAAA--------------------KASRTTSQLEGPTGANLFIYHLPHDLTDADLATAFAPFGTVISAKVYMDKITGESKGFGFVSYDSADAADAAIASMNGFQIGTKRLKVQHKRIHQRNDYLGGSS 431
BLAST of mRNA_E-siliculosus-1a_F_contig1176.1137.1 vs. uniprot
Match: A0A1V9ZMV5_9STRA (CUG-BP-and ETR-3-like factor n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZMV5_9STRA) HSP 1 Score: 171 bits (434), Expect = 6.380e-44 Identity = 141/384 (36.72%), Postives = 178/384 (46.35%), Query Frame = 1
Query: 70 TMAEQHTDDAFSRPRELLLGDHAHTDQQKKKLFVGMAPKSAYEEDYRAVFEPFGTPIDIYVIRD-RNGFSKGCAFVRYESVKSASDAIEALHDKHIMPGGFRTLVVTVADDRRGPQTSAVGTTTTRRDAVGSGDGLFRSLSRPSSFMGSDSGGGGSIPSLGNVVGQNRSTVTAPQAGATAFAPTVAPGSGXXXXQLSGMPYFLCGGNPPQGTYVYYPYVPSSSVQHDTGSSAAPVGIGAK-PHHAFSVGSPAVGNNDRCELGARGAQEDGYTGDRTVRKFGTGGPEERGRRWAKQSVGPTGANLFVYYLPGSLTDADLATAFAPFGEVLSAKVYYDRDTGESKGFGFVSYSKPDEAEAAISSMNGFFIGQKRLKVVRKRGQQTD 1215
T+ Q T S P ++ + Q+ KLF+GM PK A E R VF P G +IY++R G SKGCAF++++ SAS AIEA + + M G LVV AD RR A R+ + + L GG P L + Q + A GA A A ++PGS NP ++YY ++ TG P G+ P A + P GA A G R A Q GP GANLF+Y+LP LTDADLATAFAPFG V+SAKV+ D++TGESKGFGFVSY A+AAI+SMNGF IG KRLKV KR Q +
Sbjct: 152 TLHNQVTLPMSSNPLQVRPAEGQAGASQEHKLFIGMIPKHADESSIREVFAPHGAIEEIYILRHPATGQSKGCAFLKFKDRHSASTAIEAFNGTYTMDRGTAPLVVKFADSRRQRIQRA-------RNQAATAAAAYWQL---------PPGGTIPFPQLQQIQQQYMQQMQA--FGAQALAGQMSPGSSPSPAA-----------NP--AAFMYYNQYAFAAASGYTGF---PSGVAPPFPLDALATAVP----------GAAAAS---------------------GARAATQLEGPAGANLFIYHLPHDLTDADLATAFAPFGTVISAKVFMDKNTGESKGFGFVSYDSVAAADAAIASMNGFQIGSKRLKVQHKRVHQRE 470 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1176.1137.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1176.1137.1 >prot_E-siliculosus-1a_F_contig1176.1137.1 ID=prot_E-siliculosus-1a_F_contig1176.1137.1|Name=mRNA_E-siliculosus-1a_F_contig1176.1137.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=508bp GPFSYEHRETAPPWSVGWLPTSPTMAEQHTDDAFSRPRELLLGDHAHTDQback to top mRNA from alignment at E-siliculosus-1a_F_contig1176:11588..13919+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1176.1137.1 ID=mRNA_E-siliculosus-1a_F_contig1176.1137.1|Name=mRNA_E-siliculosus-1a_F_contig1176.1137.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=2332bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1176:11588..13919+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1176:11588..13919+ >mRNA_E-siliculosus-1a_F_contig1176.1137.1 ID=mRNA_E-siliculosus-1a_F_contig1176.1137.1|Name=mRNA_E-siliculosus-1a_F_contig1176.1137.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=3048bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1176:11588..13919+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |