prot_E-siliculosus-1a_F_contig1175.1132.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1175.1132.1
Unique Nameprot_E-siliculosus-1a_F_contig1175.1132.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length414
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1175.1132.1 vs. uniprot
Match: D7FS62_ECTSI (tRNA pseudouridine synthase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FS62_ECTSI)

HSP 1 Score: 772 bits (1994), Expect = 3.490e-281
Identity = 392/413 (94.92%), Postives = 399/413 (96.61%), Query Frame = 0
Query:    1 MLAAVVSGGFPLLRGAVGLPTATAVPAPPLPSHVAMPVLCRARPRHQRWPNGNILGPSAGFISHLAVDTSSATRVLRACAPSTTIAPHGGAEEDFNRSTPPXSTTNNENQLAKARREARFDEEGEYRVFRELLEGKKTRFVSRVMYDGTNYKGFQLQGNGLPTVQGVLEKALSTRFQTYVPVVAAGRTDTGVHSVGQAVHFDLPNANEDLSQLAYSMNQMMPEDVRVWNMSVAPPSSPWQVEKGWPWSSMLNAHGKRYSYRLFVGPVMSPLDRLYRAHASQAAGSPINVDLLYQTMPKLVGTHDFAGFSNEVDKRATLKKEDGLGEFNTVRTVYSAEIIDEGGGNIRLDFHLDGALYRMVRNMVGALLAVAAGRLEPEVIDEMFATRVRDSRVIYAAPAHGLTLDTVLYDGYG 413
            MLAAVVSGGF LLRGAVGL TATAVPAPPLPSHVAMPVLCRARPRHQRWPNG+I+GPSAGFISHLAVD SSATRVLR C PST IAPHGG EED  RSTPP STTNNE+Q AKARREARFDEEGEYRVFRELLEGKKTRFVSRVMYDGTNYKGFQLQG+GLPTVQGVLEKALSTRFQTYVPVVAAGRTDTGVHSVGQAVHFDLPNANEDLSQLAYSMNQMMPEDVRVWNMSVAPPSSPWQVEKGWPWSSMLNA GKRYSYRLFVGPVMSPLDRLYRAHASQAAGSPINVDLLYQT+PKLVG HDFAGFSNEV KRATLKKEDGLGEFNTVRTVYSAEIIDEGGGNIRLDFHLDGALYRMVRNMVGALLAVAAGRLEPEVIDE+FATRVRDSR+IYAAPAHGLTLDTVLYDGYG
Sbjct:    1 MLAAVVSGGFTLLRGAVGLATATAVPAPPLPSHVAMPVLCRARPRHQRWPNGSIVGPSAGFISHLAVDPSSATRVLRVCTPST-IAPHGGVEEDLPRSTPPRSTTNNESQQAKARREARFDEEGEYRVFRELLEGKKTRFVSRVMYDGTNYKGFQLQGHGLPTVQGVLEKALSTRFQTYVPVVAAGRTDTGVHSVGQAVHFDLPNANEDLSQLAYSMNQMMPEDVRVWNMSVAPPSSPWQVEKGWPWSSMLNARGKRYSYRLFVGPVMSPLDRLYRAHASQAAGSPINVDLLYQTIPKLVGKHDFAGFSNEVTKRATLKKEDGLGEFNTVRTVYSAEIIDEGGGNIRLDFHLDGALYRMVRNMVGALLAVAAGRLEPEVIDEIFATRVRDSRLIYAAPAHGLTLDTVLYDGYG 412          
BLAST of mRNA_E-siliculosus-1a_F_contig1175.1132.1 vs. uniprot
Match: R7QN10_CHOCR (tRNA pseudouridine synthase n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QN10_CHOCR)

HSP 1 Score: 204 bits (520), Expect = 6.590e-59
Identity = 121/288 (42.01%), Postives = 173/288 (60.07%), Query Frame = 0
Query:  137 KTRFVSRVMYDGTNYKGFQLQGNGLPTVQGVLEKALSTRFQTYVPVVAAGRTDTGVHSVGQAVHFDLPNAN-----EDLSQLAYSMNQMMPEDVRVWNMSVAPPSSPWQVEKGW--------PWSSMLNAHGKRYSYRLFVGPVMSPLDRLYRAHASQAAGSPINVDLLYQTMPKLVGTHDFAGFSNEVDKRATLKKEDGLGEFNTVRTVYSAEIIDEGGGNIRLDFHLDGALYRMVRNMVGALLAVAAGRLEPEVIDEMFATRVRDSRVI-YAAPAHGLTLDTVLYD 410
            K R  +RV YDGT Y+G+Q Q +  PTVQG LE AL  +F   + VV A RTDTGVH+ GQA+HFD+P A      E   +  Y++NQM+P DVRV  +SVAP   P +V            PW ++ NA GK Y+YR+   PV  PL RLYR H  +A     + +LL +   K VG+HDF+ F+N  +              N +R ++SA +I EG G  R++F ++GA+YRM+RN++G +L+V+ G ++   ID +FA++  D R++  +APA GL L+ V+YD
Sbjct:   53 KQRIRARVAYDGTLYRGWQYQTDQ-PTVQGALEDALRRKFGHTIRVVGASRTDTGVHARGQAMHFDIPIARALRDGESERKFHYTLNQMLPPDVRVPVLSVAPTVVPCKVTDECGNVGIATRPWHAIYNAKGKLYTYRISTSPVFDPLGRLYRYHEWRATKFGFSEELLREASAKFVGSHDFSAFTNSTNPPPGFVPPV---LSNPIRHIHSATVIPEGAGMYRIEFVINGAMYRMIRNIMGTILSVSCGSMDISNIDHLFASK--DRRLVPKSAPAKGLCLEKVIYD 334          
BLAST of mRNA_E-siliculosus-1a_F_contig1175.1132.1 vs. uniprot
Match: F0Y1Q4_AURAN (tRNA pseudouridine synthase n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y1Q4_AURAN)

HSP 1 Score: 202 bits (514), Expect = 1.790e-58
Identity = 123/284 (43.31%), Postives = 161/284 (56.69%), Query Frame = 0
Query:  138 TRFVSRVMYDGTNYKGFQLQGNGLPTVQGVLEKALSTRFQ-TYVPVVAAGRTDTGVHSVGQAVHFDLPNA---NEDLSQLAYSMNQMMPEDVRVWNMSVAPPSSPWQVEKGWPWSSMLNAHGKRYSYRLFVGPVMS-PLDRLYRAHASQAAGSPINVDLLYQTMPKLVGTHDFAGFSNE---VDKRATLKKEDGLGEFNTVRTVYSAEIIDEGGGNIRLDFHLDGALYRMVRNMVGALLAVAAGRLEPEVIDEMFATRVRDS-RVIYAAPAHGLTLDTVLYDGY 412
            TR+  RV YDGT +KG+Q+Q  G  TVQG L  AL TRF    +P + A RTD GVH+ GQ  H DLP A      L  L + +N+++P+D RV ++  AP   PWQ  +G PW ++ NA GKRY+YRL      + PL RLYR H    A   ++   L   +   VG HDFA F+N    +D     +        +T R + SA ++DEGGG+  L F LDGALY+MVRN+VGA +AVA G L  + I  + A   R +     AAPA GL L+ V YD Y
Sbjct:   33 TRYALRVAYDGTRFKGWQVQPGGARTVQGELNAALRTRFGGADIPTLGASRTDAGVHARGQCAHADLPVAPLGGAPLELLEHQINRLLPDDARVHDLRPAPAPKPWQAREGLPWHAIANAAGKRYAYRLTARRGSADPLGRLYRGHV---AYRDVDFGRLDDALSCFVGEHDFAAFANNAPGLDPSGAAR--------STTRAIRSATLLDEGGGDATLTFELDGALYKMVRNVVGAAVAVADGALPRDAIPALLAPGARRADNPAKAAPACGLCLEEVYYDDY 305          
BLAST of mRNA_E-siliculosus-1a_F_contig1175.1132.1 vs. uniprot
Match: A0A836CB05_9STRA (tRNA pseudouridine synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CB05_9STRA)

HSP 1 Score: 200 bits (509), Expect = 5.520e-57
Identity = 122/284 (42.96%), Postives = 161/284 (56.69%), Query Frame = 0
Query:  140 FVSRVMYDGTNYKGFQLQGNGLPTVQGVLEKALSTRFQTYVPVVAAGRTDTGVHSVGQAVHFDLPNANED--------LSQLAYSMNQMMPEDVRVWNMSVAPPSSPWQVEKGWPWSSMLNAHGKRYSYRLFVGPVMSPLDRLYRAHASQAAGSPINVDLLYQTMPKLVGTHDFAGFSNEVDKRATLKKEDGLGEFNTVRTVYSAEIIDEGGGNIRLDFHLDGALYRMVRNMVGALLAVAAGRLEPEVIDEMFAT-----RVRDSRVIYAAPAHGLTLDTVLYD 410
            + ++VMYDG  ++GFQLQ     TVQG LEKAL  RFQ  + V+ A RTD GVHS GQ VHFDLP +           ++ L Y +NQM+PEDVRV+ ++  P  SP Q ++G PWS+ +NA  K Y+YRL    V +PLD   RAH       P+++ +L  T+           FS++ DK A L    G G+ +TVRTV    +     G I +D  LDGALY+MVR MVGA +AVAAGR++  VI     +        D      APA GLTL+ V Y+
Sbjct:   80 YTAKVMYDGVGFRGFQLQPGNYRTVQGELEKALQKRFQRRISVLGASRTDAGVHSRGQVVHFDLPASGASALAYDPAAMALLQYCLNQMLPEDVRVYGLAPVPLPSPQQRQQGLPWSANVNARAKLYTYRLSFCDVTNPLDARQRAHYPPVLW-PVDLGVLEATL----------AFSSKADKSAALVAAAGRGDRDTVRTVVRITLRRGAPGYIDIDVLLDGALYKMVRYMVGAAVAVAAGRMDARVITTSLLSGNWEGSGADKSAAAPAPACGLTLEEVFYE 352          
BLAST of mRNA_E-siliculosus-1a_F_contig1175.1132.1 vs. uniprot
Match: A0A7S4MSL3_9STRA (tRNA pseudouridine synthase n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MSL3_9STRA)

HSP 1 Score: 196 bits (499), Expect = 2.030e-55
Identity = 125/296 (42.23%), Postives = 166/296 (56.08%), Query Frame = 0
Query:  139 RFVSRVMYDGTNYKGFQLQGNGLPTVQGVLEKALSTRFQTYVPVVAAGRTDTGVHSVGQAVHFDLPNANE---------DLSQLAYSMNQMMPEDVRVWNMSVAPPSSPWQ----VEKGWPWSSMLNAHGKRYSYRLFVGPVMSPLDRLYRAHASQAAGSPINVDLLYQTMPKLVGTHDFAGFSNEVDKRATLKKEDGLGEFNTVRTVYSAEIIDEGGGNIRLDFHLDGALYRMVRNMVGALLAVAAGRLEPEVIDEMFATRVRDSRVIY----------AAPAHGLTLDTVLYDG 411
            R+ +RV YDGT + G+Q Q  G  T+QG +E  LS RF   V +V AGRTD GVH+ GQA HFDL  A+E         DL QL  S+N M+  D+RVWN   APP S ++    +E+   W  + NA  K YSYR+   P + PL R  R H       P N++LL   +    GTHDF  F+  +D  A  +K   +    T+RTVY+  +++EG GN R+DF L GALY+MVRNM+G  LAVA GRLE + + E       + +V+           AAP  GLTL+ V +DG
Sbjct:   90 RYRARVAYDGTGFNGWQTQAKGR-TIQGDIEAVLSRRFDRPVRIVGAGRTDAGVHARGQAFHFDL-RADEIGVADSKCFDL-QLQRSLNSMLRRDIRVWNTCQAPPPSSYKNWEGIERNHKWHVIYNAEKKLYSYRISTAPYLDPLLRHTRTHVFD----PTNIELLRTALQHFEGTHDFRAFAGAID--ANERKSGKV--LGTIRTVYAVNLVEEGNGNYRVDFLLKGALYKMVRNMMGTALAVAQGRLEEDRLLEFLHHDSSEGKVLQFVRKDNKCKPAAP-EGLTLEHVYFDG 373          
BLAST of mRNA_E-siliculosus-1a_F_contig1175.1132.1 vs. uniprot
Match: A0A1Z5KP68_FISSO (tRNA pseudouridine synthase n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KP68_FISSO)

HSP 1 Score: 194 bits (492), Expect = 4.250e-55
Identity = 121/294 (41.16%), Postives = 168/294 (57.14%), Query Frame = 0
Query:  139 RFVSRVMYDGTNYKGFQLQGNGLPTVQGVLEKALSTRFQTYVPVVAAGRTDTGVHSVGQAVHFDLPNA-NEDLSQLAYSMNQMMPEDVRVWNMSVAPP--SSPWQVEKGWPWSSMLNAHGKRYSYRLFVGPVMSPLDRLYRAHASQAAGSPINVDLLYQTMPKLVGTHDFAGFSN--EVDKRATLKKEDGLGEFNTVRTVYSAEII--DEGGGNIRLDFHLDGALYRMVRNMVGALLAVAAGRLEPEVIDEMF----AT-----------RVRDSRVIYAAPAHGLTLDTVLYD 410
            R+ +RV YDG  + GFQLQ  G  TVQG LE  L  R    V +V AGRTDTGVH+ GQA+HFDL +  +E LSQ+ +S+N M+P DV +WN+S+AP   +   Q  + + W+ + N+ GK YSYRL + PVMSPL+R +R H     G  +++ LL + +    GTHDF  F+   E ++R + +        +TVRTVYSA  I  DE  G  R++FHL GALY+ VRNMVG  +  +   +  E   ++     AT           + R+      AP  GLTL+ V +D
Sbjct:   23 RYRARVAYDGAGFHGFQLQPEGKRTVQGCLEDVLGQRLGQSVRLVGAGRTDTGVHARGQAIHFDLHSPLSEPLSQIEHSINAMLPTDVCLWNLSLAPTDDTETAQPSQQYLWNVLYNSVGKLYSYRLCLAPVMSPLERHHRWHPDSLHGKAVDIPLLQRLLNYYEGTHDFRAFAGALEANQRRSGRT------VSTVRTVYSANWIVEDESLGYYRIEFHLQGALYKQVRNMVGTAIDASRSIITEEAFLDLLHGSSATIENDHLPKKQQKRREDNKSKPAPPQGLTLEHVYFD 310          
BLAST of mRNA_E-siliculosus-1a_F_contig1175.1132.1 vs. uniprot
Match: A0A7S3ST89_EMIHU (tRNA pseudouridine synthase n=3 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3ST89_EMIHU)

HSP 1 Score: 188 bits (477), Expect = 9.250e-53
Identity = 126/290 (43.45%), Postives = 164/290 (56.55%), Query Frame = 0
Query:  139 RFVSRVMYDGTNYKGFQLQGNGLPTVQGVLEKALSTRFQT-YVPVVAAGRTDTGVHSVGQAVHFDLPNANEDLSQLAYSMNQMMPEDVRVWNMSVAPPSSPWQVE-KGWPWSSMLNAHGKRYSYRLFVGPV--MSPLDRLYRAHASQAAGSPINVDLLYQTMPKLVGTHDFAGFSNEVDKRATLKKEDGLGEFNTVRTVYSAEIIDEGGGNIRLDFHLDGALYRMVRNMVGALLAVAAGRLEPEVIDEMFATRVRDSRVIYA---------------APAHGLTLDTVLY 409
            R+ +RV YDG  Y G Q Q    PTVQG L++AL+ R Q   V VVAAGRTD GVH+ GQAVHFDL +   D + L  S+  ++P D+ V ++  A      +V+  G  W ++  A GKRYSYRL+ GP     P  RLYR HA     SP+++D +  T   LVG  DF  F+N+    A   +   LG   TVRTV  A ++DEGGG +RLDF L GALY+MVRN  GAL+ V AGR   + +  + AT  +  R   +               APAHGLTL++V Y
Sbjct:   17 RYRARVSYDGGAYAGMQYQPTR-PTVQGTLQRALARRCQMPAVRVVAAGRTDAGVHARGQAVHFDLDSGTYDPADLERSLGALLPPDLAVSHVERAG-----EVDGAGRSWHAIFWATGKRYSYRLYAGPPGGRDPTTRLYRHHAHS---SPLDLDAMRTTAAALVGERDFRAFANKPRGSAPPYEASALG---TVRTVAEAAVVDEGGGCVRLDFVLKGALYKMVRNFAGALVDVGAGRRSGDDVAALLATPQQSLRSSGSGARLAGGVGAGWPKPAPAHGLTLESVYY 294          
BLAST of mRNA_E-siliculosus-1a_F_contig1175.1132.1 vs. uniprot
Match: A0A8J2SCD1_9STRA (tRNA pseudouridine synthase n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SCD1_9STRA)

HSP 1 Score: 183 bits (465), Expect = 1.430e-51
Identity = 113/280 (40.36%), Postives = 159/280 (56.79%), Query Frame = 0
Query:  136 KKTRFVSRVMYDGTNYKGFQLQGNGLPTVQGVLEKALSTRFQ-TYVPVVAAGRTDTGVHSVGQAVHFDLPNANEDLSQLAYSMNQMMPEDVRVWNMSVAPPSSPWQVEKGWPWSSMLNAHGKRYSYRLFVG-PVMSPLDRLYRAHASQAAGSPINVDLLYQTMPKLVGTHDFAGFSNEVDKRATLKKEDGLGEFNTVRTVYSAEIIDEGGGNIRLDFHLDGALYRMVRNMVGALLAVAAGRLEPEVIDEMFATR-VRDSRVIYAAPAHGLTLDTVLYDGY 412
            +  R+  RV YDGT++ G+Q Q N   TV+G L KA +TRF    VP++ A RTD+GVH+ GQA H DLP    D+  L + +N+M+P+DVR+  +  APP      EK  PW ++  + GKRYSYR+        PL+RLYRAH        ++  LL   + +  G  DF  F+N    +  L       E +T+R + S E  DEG G+  +   LDGALYRMVRN+VGA +A   G+L+ + +DE+ + R  R      +APA GL L+ V YD +
Sbjct:   14 RAARYALRVAYDGTHFNGWQHQPNAR-TVEGELRKAFTTRFDGANVPLLGASRTDSGVHARGQAAHVDLPEEVADVDLLKHQLNRMLPDDVRINCVREAPPGG----EK--PWHAIACSTGKRYSYRMTARYGSQDPLERLYRAHVCY---EDLDFALLSNALQRCRGRFDFKAFANNAPTQNPL-------EMDTIREIRSIEAEDEGFGDYTVQIELDGALYRMVRNVVGACVACGTGKLKLDELDELLSGRKTRRDNPTKSAPARGLCLEEVFYDDF 276          
BLAST of mRNA_E-siliculosus-1a_F_contig1175.1132.1 vs. uniprot
Match: A0A482SL84_9ARCH (tRNA pseudouridine synthase A n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SL84_9ARCH)

HSP 1 Score: 185 bits (470), Expect = 1.940e-51
Identity = 111/284 (39.08%), Postives = 160/284 (56.34%), Query Frame = 0
Query:  139 RFVSRVMYDGTNYKGFQLQGNG-LPTVQGVLEKALSTRFQTYVPVVAAGRTDTGVHSVGQAVHFDLPNAN----EDLSQLAYSMNQMMPEDVRVWNMSVAPPSSPWQVEKGWPWSSMLNAHGKRYSYRLFVGPVMSPLDRLYRAHASQAAGSPINVDLLYQTMPK----LVGTHDFAGFSNEVDKRATLKKEDGLGEFNTVRTVYSAEIIDEGGGNIRLDFHLDGALYRMVRNMVGALLAVAAGRLEPEVIDEMFATRV-RDSRVIYAAPAHGLTLDTVLYDGY 412
            R+V+RV YDGT Y+G+Q Q      T+QG + + LS R    V +  AGRTD GVH+ GQ +HFDL +      + +    + +NQM+P D+RV+NMS+APP +  Q+  G P+ +  +A GK+Y YR      + P+ R    H  +        +  Y T+P      VG HDFA F N+V K+     E    E++T+RT+YS + IDEG G  R++FH+  ALY+M+RNMVGA ++VA G++  E I +M      R +      P  GL L+ V YD Y
Sbjct:   75 RYVARVSYDGTAYRGWQQQSQPRTKTIQGTINQNLSKRLSREVRITGAGRTDQGVHAKGQGIHFDLFDHEYLNPDSIPNFQFKLNQMLPTDIRVYNMSLAPPGTVEQMLTGDPFHATKSAIGKKYIYRYCTNQFVEPIHRHIYTHFYR--------EYDYSTLPDCLQCFVGPHDFACFGNKV-KQFVKDFETKPIEYDTMRTIYSIQHIDEGSGYYRIEFHIKSALYKMIRNMVGACVSVAKGQITKEDIVQMLVNPTQRINNPAIPVPPEGLILEHVYYDHY 349          
BLAST of mRNA_E-siliculosus-1a_F_contig1175.1132.1 vs. uniprot
Match: A0A5J4YW71_PORPP (tRNA pseudouridine synthase n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YW71_PORPP)

HSP 1 Score: 185 bits (469), Expect = 4.890e-51
Identity = 120/297 (40.40%), Postives = 161/297 (54.21%), Query Frame = 0
Query:  132 LLEGKKTRFVSRVMYDGTNYKGFQLQGNGLPTVQGVLEKALSTRFQTYVPVVAAGRTDTGVHSVGQAVHFDLPNA--NEDLSQ--------LAYSMNQMMPEDVRVWNMSVAPPSSPWQVEKGW---PWSSMLNAHGKRYSYRLFVGPVMSPLDRLYRAHASQAAGSPINVDLLYQTMPKLVGTHDFAGFSNEVDKRATLKKEDGLGEFNTVRTVYSAEII-DEGGGNIR-LDFHLDGALYRMVRNMVGALLAVAAGRLEPEVIDEMFATRVRDSRVI-YAAPAHGLTLDTVLYDGY 412
            +L G+  R    V YDGT ++G+Q Q N   +VQ  LEK  S R   +  VV A RTDTGVH+ GQ  HFD+P     EDL Q        L + +N+M+P +++V  M VAPP S  ++  G    PW S+  A  K YSY++     M PL+RLYR H  QA     + DL    + + VGTHDF+ F+N +     ++        N VRTV+S  +I DE    +  ++  L GALY+MVRNM+GA L VA   + PE ID +   R  D R+   AAPA GL LD + Y  Y
Sbjct:   90 VLRGETYRCRMTVAYDGTEFRGWQYQINTRNSVQATLEKVFSRRLNGFTRVVGASRTDTGVHARGQVAHFDIPEEIPKEDLQQDDSSGLSRLEFQVNRMLPANLQVLRMEVAPPPSLVKLPSGERLKPWHSIYCAQHKIYSYKIMFATCMDPLERLYRHHEYQAC----DTDLFEAALQRFVGTHDFSSFANRLSHGEVVR--------NPVRTVHSVRVIRDERDPRLMTVEVDLQGALYKMVRNMIGAALHVARHDMPPEHIDVLLGAR--DRRIAPKAAPARGLCLDRIFYADY 372          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1175.1132.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FS62_ECTSI3.490e-28194.92tRNA pseudouridine synthase n=2 Tax=Ectocarpus Tax... [more]
R7QN10_CHOCR6.590e-5942.01tRNA pseudouridine synthase n=1 Tax=Chondrus crisp... [more]
F0Y1Q4_AURAN1.790e-5843.31tRNA pseudouridine synthase n=1 Tax=Aureococcus an... [more]
A0A836CB05_9STRA5.520e-5742.96tRNA pseudouridine synthase n=1 Tax=Tribonema minu... [more]
A0A7S4MSL3_9STRA2.030e-5542.23tRNA pseudouridine synthase n=1 Tax=Odontella auri... [more]
A0A1Z5KP68_FISSO4.250e-5541.16tRNA pseudouridine synthase n=1 Tax=Fistulifera so... [more]
A0A7S3ST89_EMIHU9.250e-5343.45tRNA pseudouridine synthase n=3 Tax=Emiliania huxl... [more]
A0A8J2SCD1_9STRA1.430e-5140.36tRNA pseudouridine synthase n=1 Tax=Pelagomonas ca... [more]
A0A482SL84_9ARCH1.940e-5139.08tRNA pseudouridine synthase A n=1 Tax=archaeon Tax... [more]
A0A5J4YW71_PORPP4.890e-5140.40tRNA pseudouridine synthase n=1 Tax=Porphyridium p... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR020095Pseudouridine synthase I, TruA, C-terminalGENE3D3.30.70.660coord: 255..411
e-value: 8.9E-29
score: 102.0
NoneNo IPR availableGENE3D3.30.70.580coord: 136..238
e-value: 4.5E-26
score: 93.3
NoneNo IPR availablePANTHERPTHR11142:SF0TRNA PSEUDOURIDINE SYNTHASEcoord: 118..410
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..13
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 19..413
IPR020097Pseudouridine synthase I, TruA, alpha/beta domainPFAMPF01416PseudoU_synth_1coord: 145..225
e-value: 7.2E-6
score: 26.4
coord: 298..410
e-value: 2.3E-18
score: 66.6
IPR001406Pseudouridine synthase I, TruAPANTHERPTHR11142PSEUDOURIDYLATE SYNTHASEcoord: 118..410
IPR001406Pseudouridine synthase I, TruAHAMAPMF_00171TruAcoord: 138..409
score: 27.106
IPR020103Pseudouridine synthase, catalytic domain superfamilySUPERFAMILY55120Pseudouridine synthasecoord: 137..412

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1175contigE-siliculosus-1a_F_contig1175:14183..16302 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1175.1132.1mRNA_E-siliculosus-1a_F_contig1175.1132.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1175 14139..16434 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1175.1132.1 ID=prot_E-siliculosus-1a_F_contig1175.1132.1|Name=mRNA_E-siliculosus-1a_F_contig1175.1132.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=414bp
MLAAVVSGGFPLLRGAVGLPTATAVPAPPLPSHVAMPVLCRARPRHQRWP
NGNILGPSAGFISHLAVDTSSATRVLRACAPSTTIAPHGGAEEDFNRSTP
PPSTTNNENQLAKARREARFDEEGEYRVFRELLEGKKTRFVSRVMYDGTN
YKGFQLQGNGLPTVQGVLEKALSTRFQTYVPVVAAGRTDTGVHSVGQAVH
FDLPNANEDLSQLAYSMNQMMPEDVRVWNMSVAPPSSPWQVEKGWPWSSM
LNAHGKRYSYRLFVGPVMSPLDRLYRAHASQAAGSPINVDLLYQTMPKLV
GTHDFAGFSNEVDKRATLKKEDGLGEFNTVRTVYSAEIIDEGGGNIRLDF
HLDGALYRMVRNMVGALLAVAAGRLEPEVIDEMFATRVRDSRVIYAAPAH
GLTLDTVLYDGYG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR020103PsdUridine_synth_cat_dom_sf
IPR001406PsdUridine_synth_TruA
IPR020097PsdUridine_synth_TruA_a/b_dom
IPR020095PsdUridine_synth_TruA_C