prot_E-siliculosus-1a_F_contig1174.1128.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1174.1128.1
Unique Nameprot_E-siliculosus-1a_F_contig1174.1128.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length389
Homology
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig1174.1128.1 vs. uniprot
Match: D8LBY3_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBY3_ECTSI)

HSP 1 Score: 160 bits (404), Expect = 2.050e-39
Identity = 76/82 (92.68%), Postives = 79/82 (96.34%), Query Frame = 0 
Query:    1 MAQMDRDALVALYRATGGENWREQENWDTDADLKTWHGVDVNDQGRVVKLKLRDNNLEGEIPATLGKLGSLQQLHLSWNKLS 82
            MAQ DRDALV LYRATGGENWRE++NWDTDADLKTWHGVDVNDQGRVVKLKLRDNNLEGEIPATLGKLG+LQQLHLS NKLS
Sbjct:    1 MAQTDRDALVVLYRATGGENWRERQNWDTDADLKTWHGVDVNDQGRVVKLKLRDNNLEGEIPATLGKLGNLQQLHLSSNKLS 82
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig1174.1128.1 vs. uniprot
Match: A0A6H5JK91_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK91_9PHAE)

HSP 1 Score: 143 bits (361), Expect = 8.240e-38
Identity = 67/73 (91.78%), Postives = 70/73 (95.89%), Query Frame = 0 
Query:    1 MAQMDRDALVALYRATGGENWREQENWDTDADLKTWHGVDVNDQGRVVKLKLRDNNLEGEIPATLGKLGSLQQ 73
            MAQ DRDALVALYRATGGENWRE +NWDTDADLKTWHGVDVNDQGRVVKLKLRDNNLEGEIPATLG+L +LQQ
Sbjct:    1 MAQTDRDALVALYRATGGENWRESQNWDTDADLKTWHGVDVNDQGRVVKLKLRDNNLEGEIPATLGQLANLQQ 73
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig1174.1128.1 vs. uniprot
Match: A0A6H5K3C2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3C2_9PHAE)

HSP 1 Score: 103 bits (258), Expect = 6.210e-24
Identity = 47/59 (79.66%), Postives = 52/59 (88.14%), Query Frame = 0 
Query:    1 MAQMDRDALVALYRATGGENWREQENWDTDADLKTWHGVDVNDQGRVVKLKLRDNNLEG 59
            MAQ DRDALVA+YRATGGE W   +NWDTD+DLKTWHGV+VNDQGRVVKL+L  NNLEG
Sbjct:    1 MAQTDRDALVAMYRATGGEKWSTSQNWDTDSDLKTWHGVNVNDQGRVVKLELGFNNLEG 59
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig1174.1128.1 vs. uniprot
Match: A0A6H5K3D6_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3D6_9PHAE)

HSP 1 Score: 100 bits (248), Expect = 2.110e-22
Identity = 48/77 (62.34%), Postives = 57/77 (74.03%), Query Frame = 0 
Query:    5 DRDALVALYRATGGENWREQENWDTDADLKTWHGVDVNDQGRVVKLKLRDNNLEGEIPATLGKLGSLQQLHLSWNKL 81
            DR ALVAL+ ATGG NW++   W+TDA L  W+GV+VND GRVVKL LR NNL+G IP  LG LG+L  L+L  NKL
Sbjct:   12 DRAALVALFNATGGANWKKNTKWNTDAPLGQWYGVEVNDAGRVVKLSLRYNNLKGHIPRQLGDLGALMTLNLGVNKL 88
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig1174.1128.1 vs. uniprot
Match: D8LF65_ECTSI (Hypothetical leucine-rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF65_ECTSI)

HSP 1 Score: 99.4 bits (246), Expect = 1.270e-21
Identity = 46/77 (59.74%), Postives = 56/77 (72.73%), Query Frame = 0 
Query:    1 MAQMDRDALVALYRATGGENWREQENWDTDADLKTWHGVDVNDQGRVVKLKLRDNNLEGEIPATLGKLGSLQQLHLS 77
            M+ MDR AL+AL+R+T G NW+   NWDTDA+L TW GV+VND+GRVV+L L DNNL G IP  LG L  L  L +S
Sbjct:    1 MSTMDRAALIALFRSTDGANWKTNSNWDTDAELATWAGVEVNDEGRVVQLILPDNNLHGPIPEALGTLNELTHLSMS 77
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig1174.1128.1 vs. uniprot
Match: A0A6H5KQP2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQP2_9PHAE)

HSP 1 Score: 97.8 bits (242), Expect = 1.810e-20
Identity = 45/74 (60.81%), Postives = 57/74 (77.03%), Query Frame = 0 
Query:    1 MAQMDRDALVALYRATGGENWREQENWDTDADLKTWHGVDVNDQGRVVKLKLRDNNLEGEIPATLGKLGSLQQL 74
            M   DR+ALV+L+R+TGG  W  ++NWDTDADL TW+GV+VN QGRVV L L+ NNL+G IP  LGKL +L+ L
Sbjct:    1 MVSTDREALVSLFRSTGGAGWIRRDNWDTDADLATWNGVNVNVQGRVVNLDLQYNNLQGSIPPELGKLAALRAL 74
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig1174.1128.1 vs. uniprot
Match: D8LL09_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL09_ECTSI)

HSP 1 Score: 101 bits (251), Expect = 2.550e-20
Identity = 46/77 (59.74%), Postives = 56/77 (72.73%), Query Frame = 0 
Query:    1 MAQMDRDALVALYRATGGENWREQENWDTDADLKTWHGVDVNDQGRVVKLKLRDNNLEGEIPATLGKLGSLQQLHLS 77
            M Q DRDALVALY A GG NW+   NW+ DADL  WHG+++NDQGRVV++ L  NNL+G IP  LG L  L++L LS
Sbjct:   51 MPQTDRDALVALYDAAGGFNWKNNGNWNADADLSKWHGININDQGRVVEVHLAANNLQGSIPEALGALSKLERLWLS 127
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig1174.1128.1 vs. uniprot
Match: A0A6H5K8T5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8T5_9PHAE)

HSP 1 Score: 96.7 bits (239), Expect = 5.960e-20
Identity = 46/77 (59.74%), Postives = 56/77 (72.73%), Query Frame = 0 
Query:    5 DRDALVALYRATGGENWREQENWDTDADLKTWHGVDVNDQGRVVKLKLRDNNLEGEIPATLGKLGSLQQLHLSWNKL 81
            DRDALVALY AT G NW+ ++NW+TD  L  W GV+ NDQGRVV L L DN L G IP+ LG L +LQ+L+L  N+L
Sbjct:  112 DRDALVALYDATDGANWKSKQNWNTDLPLGRWRGVEANDQGRVVGLDLPDNKLHGHIPSDLGHLSALQKLNLLSNQL 188
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig1174.1128.1 vs. uniprot
Match: A0A6H5L6T0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6T0_9PHAE)

HSP 1 Score: 95.1 bits (235), Expect = 3.160e-19
Identity = 44/75 (58.67%), Postives = 56/75 (74.67%), Query Frame = 0 
Query:    1 MAQMDRDALVALYRATGGENWREQENWDTDADLKTWHGVDVNDQGRVVKLKLRDNNLEGEIPATLGKLGSLQQLH 75
            M+  DR+AL+AL+R+TGG  W  ++NWDTDA L TW GV+VNDQGRVV L L  NNL+G IP+ LG L +L  L+
Sbjct:   19 MSSTDREALIALFRSTGGAGWWRRDNWDTDAVLATWDGVNVNDQGRVVGLSLIRNNLQGPIPSKLGNLSALTALY 93
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig1174.1128.1 vs. uniprot
Match: D7FXI0_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXI0_ECTSI)

HSP 1 Score: 95.5 bits (236), Expect = 3.340e-19
Identity = 43/68 (63.24%), Postives = 51/68 (75.00%), Query Frame = 0 
Query:    1 MAQMDRDALVALYRATGGENWREQENWDTDADLKTWHGVDVNDQGRVVKLKLRDNNLEGEIPATLGKL 68
            M+  DR+AL+AL+R+TGG  W  ++NWDTDA L TWHGV VNDQGRVV L L  NNL+G IP  LG L
Sbjct:    1 MSSTDREALIALFRSTGGAGWMRRDNWDTDAVLGTWHGVKVNDQGRVVMLSLDQNNLQGHIPRQLGDL 68
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1174.1128.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LBY3_ECTSI2.050e-3992.68Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
A0A6H5JK91_9PHAE8.240e-3891.78Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K3C2_9PHAE6.210e-2479.66Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K3D6_9PHAE2.110e-2262.34Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
D8LF65_ECTSI1.270e-2159.74Hypothetical leucine-rich repeat protein n=1 Tax=E... [more]
A0A6H5KQP2_9PHAE1.810e-2060.81Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LL09_ECTSI2.550e-2059.74Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
A0A6H5K8T5_9PHAE5.960e-2059.74Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L6T0_9PHAE3.160e-1958.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FXI0_ECTSI3.340e-1963.24Hypothetical leucine rich repeat protein n=1 Tax=E... [more]

Pages

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003591Leucine-rich repeat, typical subtypeSMARTSM00369LRR_typ_2coord: 262..286
e-value: 5.3
score: 15.5
coord: 141..165
e-value: 8.9
score: 13.7
coord: 238..261
e-value: 31.0
score: 9.2
coord: 310..333
e-value: 26.0
score: 9.9
coord: 334..357
e-value: 120.0
score: 4.3
coord: 189..213
e-value: 28.0
score: 9.6
coord: 117..140
e-value: 210.0
score: 2.4
coord: 68..93
e-value: 4.0
score: 16.4
coord: 214..237
e-value: 76.0
score: 6.1
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 1..158
e-value: 6.6E-46
score: 158.1
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 159..254
e-value: 1.4E-30
score: 108.0
coord: 255..365
e-value: 1.7E-32
score: 114.3
IPR001611Leucine-rich repeatPFAMPF13855LRR_8coord: 215..275
e-value: 2.7E-8
score: 33.5
coord: 287..347
e-value: 1.6E-7
score: 31.0
coord: 94..154
e-value: 4.3E-8
score: 32.8
NoneNo IPR availablePANTHERPTHR27008FAMILY NOT NAMEDcoord: 103..283
coord: 216..360
NoneNo IPR availablePANTHERPTHR27008FAMILY NOT NAMEDcoord: 47..244
NoneNo IPR availablePANTHERPTHR27008:SF210coord: 47..244
coord: 103..283
coord: 216..360
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 41..359

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1174contigE-siliculosus-1a_F_contig1174:12170..28573 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1174.1128.1mRNA_E-siliculosus-1a_F_contig1174.1128.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1174 12170..28573 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1174.1128.1 ID=prot_E-siliculosus-1a_F_contig1174.1128.1|Name=mRNA_E-siliculosus-1a_F_contig1174.1128.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=389bp
MAQMDRDALVALYRATGGENWREQENWDTDADLKTWHGVDVNDQGRVVKL
KLRDNNLEGEIPATLGKLGSLQQLHLSWNKLSAGHIPEELGDLRQLQALE
LYRNQLTGPIPEVLGALSNLLWLSLYSNQLTGEIPTTLGQLGNLEELNLS
WNKLSGPIPDVLGALSNLRELLLSSNQHTGEIPATLGQLGNLQQLDLSWN
KLSAGCIPQELGGLSQLQTLWLYFNQLTGPIPEALGALSNLRELSLYSNR
LTDEIPATLGQLGNLQQLRLSWNKLSGHIPHELGSLSQLQTLGLHHNQLT
GPIFEALGDLSELEFLVLNDNQLTGLIPKELGNLRGLERLYLHNNQLSGP
IPLEVQKLPRFGKFITGIALNGPPLPAVRDPLHAFKILI
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001611Leu-rich_rpt
IPR032675LRR_dom_sf
IPR003591Leu-rich_rpt_typical-subtyp