prot_E-siliculosus-1a_F_contig1173.1124.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1173.1124.1
Unique Nameprot_E-siliculosus-1a_F_contig1173.1124.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length141
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig1173.1124.1 vs. uniprot
Match: A0A6H5K749_9PHAE (WW domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K749_9PHAE)

HSP 1 Score: 205 bits (521), Expect = 1.390e-58
Identity = 105/109 (96.33%), Postives = 106/109 (97.25%), Query Frame = 0 
Query:    1 MATRRRHSTRCWPRAAALALSLAGGCLSGVAPPSVPPGWTVHFQQDTPYFYNEKTGETTWEQPRPTTTSDPATAVAPSAASAATPGYLAAAGTNEPRSPSSSQRDISSQ 109
            MATRRRHSTRCWPRAAALALSLAGGCLSGVAPPSVPPGWTVHFQQDTPYFYNEKTGETTWEQPR TTT+DPATAVAPSAASAATPGYLAAAGTNEPRSPSSS RD SSQ
Sbjct:    1 MATRRRHSTRCWPRAAALALSLAGGCLSGVAPPSVPPGWTVHFQQDTPYFYNEKTGETTWEQPRRTTTADPATAVAPSAASAATPGYLAAAGTNEPRSPSSSHRDFSSQ 109
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1173.1124.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5K749_9PHAE1.390e-5896.33WW domain-containing protein n=1 Tax=Ectocarpus sp... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001202WW domainSMARTSM00456ww_5coord: 34..65
e-value: 3.0E-8
score: 43.4
IPR001202WW domainPFAMPF00397WWcoord: 35..63
e-value: 4.4E-7
score: 29.9
IPR001202WW domainPROSITEPS01159WW_DOMAIN_1coord: 39..63
IPR001202WW domainPROSITEPS50020WW_DOMAIN_2coord: 33..65
score: 14.166
NoneNo IPR availableGENE3D2.20.70.10coord: 32..81
e-value: 1.2E-9
score: 39.6
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..28
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 15..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 24..28
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 29..141
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..26
score: 7.0
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..28
score: 0.682
IPR036020WW domain superfamilySUPERFAMILY51045WW domaincoord: 30..65

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1173contigE-siliculosus-1a_F_contig1173:26234..29033 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1173.1124.1mRNA_E-siliculosus-1a_F_contig1173.1124.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1173 26203..29033 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1173.1124.1 ID=prot_E-siliculosus-1a_F_contig1173.1124.1|Name=mRNA_E-siliculosus-1a_F_contig1173.1124.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=141bp
MATRRRHSTRCWPRAAALALSLAGGCLSGVAPPSVPPGWTVHFQQDTPYF
YNEKTGETTWEQPRPTTTSDPATAVAPSAASAATPGYLAAAGTNEPRSPS
SSQRDISSQPPDRGGRPPSSSAAGGGGARKRGWFGLRRQAA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036020WW_dom_sf
IPR001202WW_dom