prot_E-siliculosus-1a_F_contig1171.1111.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1171.1111.1
Unique Nameprot_E-siliculosus-1a_F_contig1171.1111.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length48
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1171.1111.1 vs. uniprot
Match: D8LHJ0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHJ0_ECTSI)

HSP 1 Score: 86.7 bits (213), Expect = 1.440e-21
Identity = 42/47 (89.36%), Postives = 43/47 (91.49%), Query Frame = 0
Query:    1 MMFEKLGVPAEVMSKDAVLACFSIGRTTASLVDVGGDSTVVTPVYDG 47
            MMF+K GVPAE MSKDAVLACFSIGRTTASLVDVGGD  VVTPVYDG
Sbjct:    6 MMFDKFGVPAEFMSKDAVLACFSIGRTTASLVDVGGDIAVVTPVYDG 52          
BLAST of mRNA_E-siliculosus-1a_F_contig1171.1111.1 vs. uniprot
Match: D8LHI8_ECTSI (Protein binding protein, putative n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHI8_ECTSI)

HSP 1 Score: 88.6 bits (218), Expect = 2.270e-19
Identity = 43/46 (93.48%), Postives = 43/46 (93.48%), Query Frame = 0
Query:    2 MFEKLGVPAEVMSKDAVLACFSIGRTTASLVDVGGDSTVVTPVYDG 47
            MFEK GVPAE MSKDAVLACFSIGRTTASLVDVGGDS VVTPVYDG
Sbjct:  177 MFEKFGVPAEFMSKDAVLACFSIGRTTASLVDVGGDSAVVTPVYDG 222          
BLAST of mRNA_E-siliculosus-1a_F_contig1171.1111.1 vs. uniprot
Match: A0A6H5KHN4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHN4_9PHAE)

HSP 1 Score: 80.5 bits (197), Expect = 1.680e-16
Identity = 38/47 (80.85%), Postives = 41/47 (87.23%), Query Frame = 0
Query:    1 MMFEKLGVPAEVMSKDAVLACFSIGRTTASLVDVGGDSTVVTPVYDG 47
            MMFE+ GVPAE +SKD VL CFSIGRTTASLVDVGGDS V TPV+DG
Sbjct:  232 MMFEEFGVPAEFVSKDGVLPCFSIGRTTASLVDVGGDSAVATPVFDG 278          
BLAST of mRNA_E-siliculosus-1a_F_contig1171.1111.1 vs. uniprot
Match: D8LHJ1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHJ1_ECTSI)

HSP 1 Score: 63.9 bits (154), Expect = 1.650e-12
Identity = 31/36 (86.11%), Postives = 33/36 (91.67%), Query Frame = 0
Query:    1 MMFEKLGVPAEVMSKDAVLACFSIGRTTASLVDVGG 36
            M+ E+ GVPAE MSKDAVLACFSIGRTTASLVDVGG
Sbjct:    6 MILEEFGVPAEFMSKDAVLACFSIGRTTASLVDVGG 41          
BLAST of mRNA_E-siliculosus-1a_F_contig1171.1111.1 vs. uniprot
Match: A0A835Z589_9STRA (Actin family n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z589_9STRA)

HSP 1 Score: 61.2 bits (147), Expect = 1.060e-9
Identity = 30/47 (63.83%), Postives = 37/47 (78.72%), Query Frame = 0
Query:    1 MMFEKLGVPAEVMSKDAVLACFSIGRTTASLVDVGGDSTVVTPVYDG 47
            +MFEK  VPA  M +DAVL+CFS+G+TT + VDVGG +TV TPV DG
Sbjct:  111 LMFEKFDVPALFMGRDAVLSCFSLGKTTGTAVDVGGHTTV-TPVTDG 156          
BLAST of mRNA_E-siliculosus-1a_F_contig1171.1111.1 vs. uniprot
Match: B8CAA7_THAPS (Actin related protein centractin-like protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CAA7_THAPS)

HSP 1 Score: 59.3 bits (142), Expect = 4.850e-9
Identity = 26/46 (56.52%), Postives = 36/46 (78.26%), Query Frame = 0
Query:    2 MFEKLGVPAEVMSKDAVLACFSIGRTTASLVDVGGDSTVVTPVYDG 47
            +FE   +PA    +DAV AC+++GRTTA++VDVG  ST+VTPVY+G
Sbjct:   75 LFETHNLPATFFLRDAVAACYAVGRTTATVVDVGYSSTMVTPVYEG 120          
BLAST of mRNA_E-siliculosus-1a_F_contig1171.1111.1 vs. uniprot
Match: A0A7S2Q3G1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2Q3G1_9STRA)

HSP 1 Score: 57.0 bits (136), Expect = 3.290e-8
Identity = 24/46 (52.17%), Postives = 35/46 (76.09%), Query Frame = 0
Query:    2 MFEKLGVPAEVMSKDAVLACFSIGRTTASLVDVGGDSTVVTPVYDG 47
            MFE   +P+    +DA+ AC+++GRTTA++VDVG   T+VTPVY+G
Sbjct:  177 MFETHNLPSVFFLRDAIAACYAVGRTTATVVDVGYSGTMVTPVYEG 222          
BLAST of mRNA_E-siliculosus-1a_F_contig1171.1111.1 vs. uniprot
Match: A0A1R1X3L6_9FUNG (Actin-like protein 6A n=2 Tax=Smittium culicis TaxID=133412 RepID=A0A1R1X3L6_9FUNG)

HSP 1 Score: 53.5 bits (127), Expect = 5.440e-7
Identity = 24/47 (51.06%), Postives = 32/47 (68.09%), Query Frame = 0
Query:    1 MMFEKLGVPAEVMSKDAVLACFSIGRTTASLVDVGGDSTVVTPVYDG 47
            +MFEK  VP   +SK A L+ F  G++TA +VD GG++T   PVYDG
Sbjct:  164 LMFEKFNVPGFFVSKSAALSAFGTGKSTALVVDSGGETTSAVPVYDG 210          
BLAST of mRNA_E-siliculosus-1a_F_contig1171.1111.1 vs. uniprot
Match: D8R5L0_SELML (Uncharacterized protein n=3 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8R5L0_SELML)

HSP 1 Score: 53.5 bits (127), Expect = 5.560e-7
Identity = 25/47 (53.19%), Postives = 33/47 (70.21%), Query Frame = 0
Query:    1 MMFEKLGVPAEVMSKDAVLACFSIGRTTASLVDVGGDSTVVTPVYDG 47
            +MFEK GVPA  ++K+AVL  F+ GR T+ + D GG ST V  V+DG
Sbjct:  119 LMFEKYGVPAVFLAKNAVLTSFASGRATSLVADCGGGSTTVAAVHDG 165          
BLAST of mRNA_E-siliculosus-1a_F_contig1171.1111.1 vs. uniprot
Match: A0A1R1Y1G8_9FUNG (Actin-like protein 6A n=1 Tax=Smittium culicis TaxID=133412 RepID=A0A1R1Y1G8_9FUNG)

HSP 1 Score: 53.1 bits (126), Expect = 7.610e-7
Identity = 23/47 (48.94%), Postives = 32/47 (68.09%), Query Frame = 0
Query:    1 MMFEKLGVPAEVMSKDAVLACFSIGRTTASLVDVGGDSTVVTPVYDG 47
            +MFEK  VP   +SK A L+ F  G++TA ++D GG++T   PVYDG
Sbjct:  173 LMFEKFNVPGFFVSKSAALSAFGTGKSTALVIDSGGETTSAVPVYDG 219          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1171.1111.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LHJ0_ECTSI1.440e-2189.36Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LHI8_ECTSI2.270e-1993.48Protein binding protein, putative n=2 Tax=Ectocarp... [more]
A0A6H5KHN4_9PHAE1.680e-1680.85Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LHJ1_ECTSI1.650e-1286.11Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835Z589_9STRA1.060e-963.83Actin family n=1 Tax=Tribonema minus TaxID=303371 ... [more]
B8CAA7_THAPS4.850e-956.52Actin related protein centractin-like protein n=1 ... [more]
A0A7S2Q3G1_9STRA3.290e-852.17Hypothetical protein (Fragment) n=1 Tax=Skeletonem... [more]
A0A1R1X3L6_9FUNG5.440e-751.06Actin-like protein 6A n=2 Tax=Smittium culicis Tax... [more]
D8R5L0_SELML5.560e-753.19Uncharacterized protein n=3 Tax=Selaginella moelle... [more]
A0A1R1Y1G8_9FUNG7.610e-748.94Actin-like protein 6A n=1 Tax=Smittium culicis Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004000Actin familyPFAMPF00022Actincoord: 1..47
e-value: 5.5E-13
score: 48.3
NoneNo IPR availableGENE3D3.30.420.40coord: 1..18
e-value: 6.6E-13
score: 50.2
NoneNo IPR availableGENE3D3.30.420.40coord: 19..47
e-value: 6.6E-13
score: 50.2
NoneNo IPR availableSUPERFAMILY53067Actin-like ATPase domaincoord: 1..31

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1171contigE-siliculosus-1a_F_contig1171:210..353 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1171.1111.1mRNA_E-siliculosus-1a_F_contig1171.1111.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1171 210..356 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1171.1111.1 ID=prot_E-siliculosus-1a_F_contig1171.1111.1|Name=mRNA_E-siliculosus-1a_F_contig1171.1111.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=48bp
MMFEKLGVPAEVMSKDAVLACFSIGRTTASLVDVGGDSTVVTPVYDG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004000Actin