prot_E-siliculosus-1a_F_contig1168.1092.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1168.1092.1
Unique Nameprot_E-siliculosus-1a_F_contig1168.1092.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length365
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1168.1092.1 vs. uniprot
Match: D7FVJ6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVJ6_ECTSI)

HSP 1 Score: 609 bits (1571), Expect = 2.470e-218
Identity = 320/364 (87.91%), Postives = 342/364 (93.96%), Query Frame = 0
Query:    1 TLASNSLYAFGFGSMAIGLVVRAGDIGYHDDGPLQVAYILLRPCGMFEVAMIAEYWVESLPSQILTPDSFAGKLRNASETSSLFVVIGVANGGLVSLLGVMTFFARSWPQQAADVFIIGGVLTAELVIFFVASRITAVINQATSIEIGRPGSPSSRAFYFKAKRNLWVQAAALCGVGCFPMLVIAIKRLTMAGRSTPIILETLQILTGHGGAIMFSSATSFDRASRMKRNSAVDNSGVPWSRRISAAQMGVVSAIASEAAPSVMIARIKSMNPKKKGKAKTSDPVQAEQQGEVSEGSRRSCSIGEDAIEVVPFVLRSSGSIGADSFCHHPHPKAARVIPISVPLTAISVSSDETSTSTMTAGRN 364
            ++ +  LYAFGFG MAIGLV+RAGDIGYHDDGPL+VAYILLRPC MFEVAMIAEYWVESLPSQILTPDSFAGKLRNASETSSLFVVIGVANGGLVSLLGVMTFFARSWPQQAAD+FI+GGVLTAELV+FFVASRITAVINQATS  +GRPGSPSSRAFYFKAKRN+W+QAAALCGVGCFPMLVIAIKRLTMAGRSTPII+ETLQILTGHGGAIMFSSATSFDRAS M+RNSAVD S VPW RRIS A+MGVVSA+ASEAAPS MIARIKSM+PKKKGKAKT++ VQAE+QGE+S+GSR SCSIGEDAIEVVPFV RSSGS GA    H PHPKAARVIPISVPLTAISVSSDETSTS+MTAGRN
Sbjct:    3 SMVTGCLYAFGFGWMAIGLVIRAGDIGYHDDGPLRVAYILLRPCAMFEVAMIAEYWVESLPSQILTPDSFAGKLRNASETSSLFVVIGVANGGLVSLLGVMTFFARSWPQQAADLFIVGGVLTAELVVFFVASRITAVINQATSTAMGRPGSPSSRAFYFKAKRNMWIQAAALCGVGCFPMLVIAIKRLTMAGRSTPIIIETLQILTGHGGAIMFSSATSFDRASGMRRNSAVDTSRVPWRRRISVARMGVVSAVASEAAPSAMIARIKSMDPKKKGKAKTTELVQAEEQGEISKGSRMSCSIGEDAIEVVPFVQRSSGSFGAVCIHHPPHPKAARVIPISVPLTAISVSSDETSTSSMTAGRN 366          
BLAST of mRNA_E-siliculosus-1a_F_contig1168.1092.1 vs. uniprot
Match: A0A6H5KVX1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVX1_9PHAE)

HSP 1 Score: 294 bits (752), Expect = 1.080e-96
Identity = 152/191 (79.58%), Postives = 159/191 (83.25%), Query Frame = 0
Query:   15 MAIGLVVRAGDIGYHDDGPLQVAYILLRPCGMFEVAMIAEYWVESLPSQILTPDSFAGKLRNASETSSLFVVIGVANGGLVSLLGVMTFFARSWPQQAADVFIIGGVLTAELVIFFVASRITAVINQATSIEIGRPGSPSSRAFYFKAKRNLWVQAAALCGVGCFPMLVIAIKRLTMAGRSTPIILETLQI 205
            MAIGL VRAGDIGYHDDGPLQVAYILLRPC MFEVAMIAEYWVESLPSQILTPDSFAGKLRNASETSSLFVVIGVANGGLVSLLGVMTFFAR+WPQQAAD+F++GG+LTA                          GSPSSR FY KAKRNLW+QAAAL GVGCFPMLVIAIK LTMAGRSTPIILETLQ+
Sbjct:    1 MAIGLAVRAGDIGYHDDGPLQVAYILLRPCAMFEVAMIAEYWVESLPSQILTPDSFAGKLRNASETSSLFVVIGVANGGLVSLLGVMTFFARTWPQQAADIFVVGGILTA--------------------------GSPSSRTFYSKAKRNLWIQAAALSGVGCFPMLVIAIKLLTMAGRSTPIILETLQV 165          
BLAST of mRNA_E-siliculosus-1a_F_contig1168.1092.1 vs. uniprot
Match: A0A6H5KTI4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTI4_9PHAE)

HSP 1 Score: 207 bits (526), Expect = 5.580e-63
Identity = 120/151 (79.47%), Postives = 131/151 (86.75%), Query Frame = 0
Query:  214 MFSSATSFDRASRMKRNSAVDNSGVPWSRRISAAQMGVVSAIASEAAPSVMIARIKSMNPKKKGKAKTSDPVQAEQQGEVSEGSRRSCSIGEDAIEVVPFVLRSSGSIGADSFCHHPHPKAARVIPISVPLTAISVSSDETSTSTMTAGRN 364
            MFS+ATSFDR S  KRNSAVD SGVPWSRRISAAQMGVVSAIASEAAPS MIARIK MNPKK GKA+T++ VQ E++GE S+ S RS SIGEDAIEVV FV RSSGS GAD   H PHP+AARV+PISVPLTA+SVSSDETSTS+MTAGRN
Sbjct:    1 MFSAATSFDRGSGTKRNSAVDTSGVPWSRRISAAQMGVVSAIASEAAPSAMIARIKRMNPKK-GKAETTELVQTEEKGETSKDSCRSGSIGEDAIEVVTFVQRSSGSFGADCIRHPPHPRAARVLPISVPLTAVSVSSDETSTSSMTAGRN 150          
BLAST of mRNA_E-siliculosus-1a_F_contig1168.1092.1 vs. uniprot
Match: D7FPB4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPB4_ECTSI)

HSP 1 Score: 160 bits (404), Expect = 6.970e-44
Identity = 86/186 (46.24%), Postives = 115/186 (61.83%), Query Frame = 0
Query:   46 MFEVAMIAEYWVESLPSQILTPDSFAGKLRNASETSSLFVVIGVANGGLVSLLGVMTFFARSWPQQAADVFIIGGVLTAELVIFFVASRITAVINQATSIEIGRPGSPSSRAFYFKAKRNLWVQAAALCGVGCFPMLVIAIKRLTMAGRSTPIILETLQILTGHGGAIMFSSATSFDRASRMKRNS 231
            +F VAM+AE+W+ESLP Q+++P SFA  L   S   ++F+V+G+ N G++S LGV T F   WP    D+ +  G     +VI FVA RIT+ IN A S       + SS  FY +AK+NLW QA ALC +GC   + IA++ LT  GRSTPII+ T Q L GH  A++F+S T F  A  M R S
Sbjct:    2 LFGVAMMAEFWLESLPHQLVSPGSFAEWLTKVSRKHNIFLVVGLLNAGIISTLGVGTLFMTFWPPLLVDLAVASGSAITCIVIIFVAVRITSFINCAMSEH-----AASSNEFYIEAKKNLWKQALALCSIGCAVSVAIAVRHLTQFGRSTPIIVWTAQTLCGHAAALIFTSLTQFQAAPSMSRAS 182          
BLAST of mRNA_E-siliculosus-1a_F_contig1168.1092.1 vs. uniprot
Match: A0A6H5KV07_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KV07_9PHAE)

HSP 1 Score: 85.1 bits (209), Expect = 9.490e-17
Identity = 40/103 (38.83%), Postives = 62/103 (60.19%), Query Frame = 0
Query:   21 VRAGDIGYHDDGPLQVAYILLRPCGMFEVAMIAEYWVESLPSQILTPDSFAGKLRNASETSSLFVVIGVANGGLVSLLGVMTFFARSWPQQAADVFIIGGVLT 123
            +R G  G +D+G +QV Y +L PC  F +  +A +WV  LPSQ+L  +S+A +L+NASE  ++ +V+G  N   VS  G++T       + AAD F+  G +T
Sbjct:    1 MREGKTGLYDEGLMQVEYAVLFPCNTFAMMQVASFWVSGLPSQLLPAESYAARLKNASEQRNIILVLGTLNASTVSGSGILTILFPYSAKVAADTFMALGSIT 103          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1168.1092.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7FVJ6_ECTSI2.470e-21887.91Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KVX1_9PHAE1.080e-9679.58Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KTI4_9PHAE5.580e-6379.47Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FPB4_ECTSI6.970e-4446.24Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KV07_9PHAE9.490e-1738.83Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 219..245
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 112..132
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 133..165
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 267..364
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 36..57
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 106..111
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 166..186
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..24
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 25..35
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 246..266
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 198..218
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 187..197
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 58..82
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 83..105
NoneNo IPR availableTMHMMTMhelixcoord: 83..105
NoneNo IPR availableTMHMMTMhelixcoord: 166..185
NoneNo IPR availableTMHMMTMhelixcoord: 115..137

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1168contigE-siliculosus-1a_F_contig1168:1536..3452 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1168.1092.1mRNA_E-siliculosus-1a_F_contig1168.1092.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1168 1536..3452 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1168.1092.1 ID=prot_E-siliculosus-1a_F_contig1168.1092.1|Name=mRNA_E-siliculosus-1a_F_contig1168.1092.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=365bp
TLASNSLYAFGFGSMAIGLVVRAGDIGYHDDGPLQVAYILLRPCGMFEVA
MIAEYWVESLPSQILTPDSFAGKLRNASETSSLFVVIGVANGGLVSLLGV
MTFFARSWPQQAADVFIIGGVLTAELVIFFVASRITAVINQATSIEIGRP
GSPSSRAFYFKAKRNLWVQAAALCGVGCFPMLVIAIKRLTMAGRSTPIIL
ETLQILTGHGGAIMFSSATSFDRASRMKRNSAVDNSGVPWSRRISAAQMG
VVSAIASEAAPSVMIARIKSMNPKKKGKAKTSDPVQAEQQGEVSEGSRRS
CSIGEDAIEVVPFVLRSSGSIGADSFCHHPHPKAARVIPISVPLTAISVS
SDETSTSTMTAGRN*
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