prot_E-siliculosus-1a_F_contig1167.1084.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1167.1084.1
Unique Nameprot_E-siliculosus-1a_F_contig1167.1084.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length1261
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1167.1084.1 vs. uniprot
Match: D7G205_ECTSI (HMMR_C domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G205_ECTSI)

HSP 1 Score: 1174 bits (3037), Expect = 0.000e+0
Identity = 931/1080 (86.20%), Postives = 950/1080 (87.96%), Query Frame = 0
Query:    1 MMAVSWAQSKVDRFEEKITGSNLGPGDYDPCLPRSQGMAGAVSLGFTSTKGMTPLDHEQNNPATTEEVLSLPAPTSKQTTTACGFGRPRPALNVGASRLEKVKAEQQEKQLVRLEMEREKLQEEVKTLRSLQGALAKSERHARAESAKVVKRAQAAERKAATVIADAGRLEEAEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDKDDLRAANDASEARLREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELSALSARLEAELVGRAEELRESEDGNAALRREAAALRGEGEALXXRXXXXXXXXXXXXXXXXGAAQEAEAKAXXLAELEKALSEERAGGAALRXXXXXXXXXXXXXXGVGAXXXXXXEASERGAQRLARELEGAEKGLESARESVACLKGAVTQGAADAESLRQRLGDALAEGVEYADQHTRAEERLRSSEADCAALWEEREEAKARLCAAFVEGRALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARVLKASGADVNAEVSRLRAKLEGKESRLAECTAREEGLREYLASSEGLRGVAKAELAAAQKALNTGAEDFVALERRLCEAEMTCERLRSGVETTELEMSERLAASEAGAASLGESLAEAAEGRGAAAARADRLQAEADGVAEECAALREEGRVAXXXXXEAEAVREGLERTVGELGSEVEGLRAAVVEKEACLEKASVAAEGHRAEAARREAEFVGLRRVLEDVEAGHSSEHGDGSKLGRGLADTHGIGAGLGEKLVSVVEEKKDVQGKLEAAEGALSSSEADRERLKLEVEANESAVEGLRGEIDETRLECEALQKAQCAMSKLEEASAEMTELKASCEGMYRVQTEGGIALREASLANRNVQRLASENAALVGHNNNKQKIKHLQNLKKESIRLQNEKARQASDLALAIAVLEAVGVLPKEAETTSTAVVAKRRGRGLHSRRSSGANSLSPARFKRLEAHGGLGGDGGEGGTQRGRSRVATTTAAATRGRKATVG 1080
            MMAVSWAQSKVDRFEEKITGSNLGPGDYDPCLPRSQGMAGAVSLGFTSTKGMT LD EQNNP TTEEVLSLPAPTSKQ TT CGFGRPRPALNVGASRLEKVKAEQQEKQLVRLEMEREKLQ+EVKTLRSLQGALAKSERHARAESAKVVKRAQAAERKAATVIADAGRLEEAEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX         DKD LRAANDASEARL  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX L+ALSARLEAELVGR EELRESEDGNAALRREAAAL         R XXXXXXXXXXX   X  AQEAEAKA XL+E     +E + GG A+R          XXXX    XXXXXX   ER AQRLAREL GAEKGLESARESVACLKGAVTQGAADAESLRQRLGDALAEGVEYADQHTRAEERLRSSEADCAALWEEREEAKARLCAAFVEGRALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                      EGKESRLAEC ARE+GL EYLASSEGLRG AKAELAAAQKALNTGAEDFVALERRLCEAEMTCERLRSGVE TELEMSE+LAASE  AA+LGESLAEAAEGRGAAAARADRLQ+EADGVA ECAALREEGR  XXXXX                         AVVEKEACLEKASVAA+ HRAEA RREAEFVGLRRVLEDVEAGHS+++G+GSKLGRG A THGIGA LGEKL+SVVEEK+DVQGKLEAAEGALSSSEADRERLKLEVEANESAVEGLRGEIDE+RLECEALQKA+CAMSKLEEASAEMTELKASCEGMYR QTEG  ALREA LANRNVQRLASENAALVGHNNNKQKIKHLQNLKKESIRLQNEKARQASDLALAIAVLEAVGVLPKEA TTSTAVVAKRRGRGLHSRRSSGANSLSPARFKRLEAHGGLGGDGGEGGTQRGRSRVATTTAA T GRKATVG
Sbjct:    1 MMAVSWAQSKVDRFEEKITGSNLGPGDYDPCLPRSQGMAGAVSLGFTSTKGMT-LDREQNNPVTTEEVLSLPAPTSKQPTTTCGFGRPRPALNVGASRLEKVKAEQQEKQLVRLEMEREKLQDEVKTLRSLQGALAKSERHARAESAKVVKRAQAAERKAATVIADAGRLEEAEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQKREEALLRDKDGLRAANDASEARLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTALSARLEAELVGRGEELRESEDGNAALRREAAALXXXXXXXAARAXXXXXXXXXXXRGLXXXAQEAEAKAAXLSE-----AEAKPGGGAVRQKLESTKEILXXXXXXXXXXXXXXXXXERVAQRLARELGGAEKGLESARESVACLKGAVTQGAADAESLRQRLGDALAEGVEYADQHTRAEERLRSSEADCAALWEEREEAKARLCAAFVEGRALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGKESRLAECAAREKGLSEYLASSEGLRGEAKAELAAAQKALNTGAEDFVALERRLCEAEMTCERLRSGVEATELEMSEQLAASEVVAAALGESLAEAAEGRGAAAARADRLQSEADGVARECAALREEGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVVEKEACLEKASVAADRHRAEATRREAEFVGLRRVLEDVEAGHSAKNGEGSKLGRGSAGTHGIGAALGEKLISVVEEKRDVQGKLEAAEGALSSSEADRERLKLEVEANESAVEGLRGEIDESRLECEALQKAKCAMSKLEEASAEMTELKASCEGMYRAQTEGSNALREAGLANRNVQRLASENAALVGHNNNKQKIKHLQNLKKESIRLQNEKARQASDLALAIAVLEAVGVLPKEAGTTSTAVVAKRRGRGLHSRRSSGANSLSPARFKRLEAHGGLGGDGGEGGTQRGRSRVATTTAATTHGRKATVG 1074          
BLAST of mRNA_E-siliculosus-1a_F_contig1167.1084.1 vs. uniprot
Match: A0A6H5LMH6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LMH6_9PHAE)

HSP 1 Score: 732 bits (1890), Expect = 9.360e-242
Identity = 723/1129 (64.04%), Postives = 747/1129 (66.16%), Query Frame = 0
Query:    2 MAVSWAQSKVDRFEEKITGSNLGPGDYDPCLPRSQGMAGAVSLGFTSTKGMTPLDHEQNNPATTEEVLSLPAPTSKQTTTACGFGRPRPALNVGASRLEKVKAEQQEKQLVRLEMEREKLQEEVKTLRSLQGALAKSERHARAESAKVVKRAQAAERKAATVIADAGRLEEAEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDKDDLRAANDASEARLREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELSALSARLEAELVGRAEELRESEDGNAALRREAAALRGEGEALXXRXXXXXXXXXXXXXXXXGAAQEAEA----------------------------KAXXLAELEKALSEERAGGAALRXXXXXXXXXXXXXXGVGAXXXXXXEASERGAQRLARELEGAEKGLESARESVACLKGAVTQGAADAESLRQRLGDALAEGVEYADQHTRAEERLRSSEADCAALWEEREEAKARLCAAFVEGRALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXA----RVLKASGADVNAEVSRLRAKLEGKESRLAECTAREEGLREYLASSEGLRGVAKAELAAAQKALNTGAEDFVALERRLCEAEMTCERLRSGVETTELEMSERLAASEAGAASLGESLAE---AAEGRGAAAAR-------------------------------------------------------------------------------------ADRLQAEADGVAEECAALREEGRVAXXXXXEAEAVREGLERTVGELGSEVEGLRAAVVEKEACLEKASVAAEGHRAEAARREAEFVGLRRVLEDVEAGHSSEHGDGSKLGRGLADTHGIGAGLGEKLVSVVEEKKDVQGKLEAAEGALSSSEADRE---------------------------------------------------------------RLKLEVEANESAVEGLRGEIDETRLECE-------------------ALQKAQCAMSKLEEASAEMTELKASCEGMYRV 928
            MAVSWAQSKVDRFEEKITGSNLGPGDYDPCLPRSQGMAGAVSLGFTSTKGM PLD EQNNP TTEE LS+PAPTSKQ T+ CGFGRPRPALNVGASRLEKVKAEQQEKQLVRLEMEREKLQ+EVKTLRSLQGALAKSERHARAESAKVVKRAQAAERKAATVIADAGRLEEAE XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  DDLRAAND SEARLRE   XXXXXXXXXXXXXXXXXXXXXXXXXXX    EL+ALSARLE ELVGRAEELRESEDGNAALRRE AALRGEGEAL  R                GAAQE                                +   AELEKAL           XXXXXXXXXXXXXX    XXXXXX                                              QRLGDALAEGVEYADQHTRAEERLRSSEADCAALWEEREE KARLCAAFVEGRALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX              A    RVLKASGADVNAE+SRLRA+LEGKESRLAEC AREEGLRE LASSEGLRG AK ELAAAQKALNTGAEDFVALERRLCEAEMTCERLRSGVETTELEM E     E GA      L E   AA+GR AAA+                                                                                       DRLQAEADGVAEECAALREEGR A     EAEAVREGLERTVGELGSEVEGLRAAVVEKEACLEKASVAAEGHR         FVGLRR   DVEA HS+++G+GSKLGRGLADT+GIGA LGEKL+S+VEEKKDVQGKLEAAEGALSSSEADRE                                                               RLK   E  E+   G +  + E+    E                   A  +A+CAMSKLEEASAEMTELKA+CEGM R+
Sbjct:    1 MAVSWAQSKVDRFEEKITGSNLGPGDYDPCLPRSQGMAGAVSLGFTSTKGMAPLDREQNNPTTTEENLSVPAPTSKQPTSTCGFGRPRPALNVGASRLEKVKAEQQEKQLVRLEMEREKLQDEVKTLRSLQGALAKSERHARAESAKVVKRAQAAERKAATVIADAGRLEEAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDLRAANDVSEARLREAQAXXXXXXXXXXXXXXXXXXXXXXXXXXXERADELTALSARLEVELVGRAEELRESEDGNAALRREVAALRGEGEALAARAGRLEAELADARRGLEGAAQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSSARAELEKALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRLGDALAEGVEYADQHTRAEERLRSSEADCAALWEEREEVKARLCAAFVEGRALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLEKMTNMWVDWFATASSEARVLKASGADVNAEMSRLRAELEGKESRLAECAAREEGLREDLASSEGLRGAAKVELAAAQKALNTGAEDFVALERRLCEAEMTCERLRSGVETTELEMFEARQDLE-GALRTNTELQERIAAADGRLAAASSNLRRXXARLSETSAGXXXXXXXXXXXXXXXXXXXXXXXXYRDRQEEDAAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDRLQAEADGVAEECAALREEGRAAAARCEEAEAVREGLERTVGELGSEVEGLRAAVVEKEACLEKASVAAEGHRXXXXXXXXXFVGLRRXXXDVEADHSAKNGEGSKLGRGLADTYGIGAALGEKLISLVEEKKDVQGKLEAAEGALSSSEADREXXXXXXXXXXXXXXXXXXXXXXXXXXCEALQKPSWEGSQAKPHAPPSCAAAIVHFSVVSQEVERLK---EGGEAQAAGAKAMLKESHAREEEAVARLQLLETSSARDVALAKYEAECAMSKLEEASAEMTELKANCEGMGRL 1125          
BLAST of mRNA_E-siliculosus-1a_F_contig1167.1084.1 vs. uniprot
Match: A0A6H5L3M6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3M6_9PHAE)

HSP 1 Score: 204 bits (518), Expect = 2.080e-56
Identity = 121/169 (71.60%), Postives = 125/169 (73.96%), Query Frame = 0
Query: 1081 GDIVPATPRSKSQIPRVSLQERLLAALESAELPQIQRRGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKTPAMLSPTRCSHLSKPVGDVGRGGHAIGGVGVKVTAVAEPSGPGKCDHEGEGYLSNEVIRGDVRRAILADVQLRTEVRKALLDQASG 1249
            GDIVPATPRSKSQIPRVSLQERLLAALESAELPQIQRRGG    XXXXXX                               KT  +LSPTRCSHLSKPVGDVGRGGHA+G VG KVTAVAEPSGP KC HE   YLSNE++RGDVRRAILADVQLRTEVRKALLDQASG
Sbjct:   23 GDIVPATPRSKSQIPRVSLQERLLAALESAELPQIQRRGGEKSSXXXXXXKPCTSSAADKSRPQLQEQQQLQQ--------KTQTVLSPTRCSHLSKPVGDVGRGGHAMGAVGEKVTAVAEPSGPRKCGHERGAYLSNEIVRGDVRRAILADVQLRTEVRKALLDQASG 183          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1167.1084.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G205_ECTSI0.000e+086.20HMMR_C domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A6H5LMH6_9PHAE9.360e-24264.04Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L3M6_9PHAE2.080e-5671.60Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 597..617
NoneNo IPR availableCOILSCoilCoilcoord: 962..989
NoneNo IPR availableCOILSCoilCoilcoord: 853..921
NoneNo IPR availableCOILSCoilCoilcoord: 741..761
NoneNo IPR availableCOILSCoilCoilcoord: 713..733
NoneNo IPR availableCOILSCoilCoilcoord: 527..582
NoneNo IPR availableCOILSCoilCoilcoord: 170..267
NoneNo IPR availableCOILSCoilCoilcoord: 422..442
NoneNo IPR availableCOILSCoilCoilcoord: 345..414
NoneNo IPR availableCOILSCoilCoilcoord: 97..134
NoneNo IPR availableCOILSCoilCoilcoord: 317..337
NoneNo IPR availablePANTHERPTHR34491FAMILY NOT NAMEDcoord: 100..1161
NoneNo IPR availablePANTHERPTHR34491:SF9coord: 100..1161
IPR031794Hyaluronan-mediated motility receptor, C-terminalPFAMPF15908HMMR_Ccoord: 899..990
e-value: 1.0E-6
score: 29.1

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1167contigE-siliculosus-1a_F_contig1167:3422..16757 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1167.1084.1mRNA_E-siliculosus-1a_F_contig1167.1084.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1167 3422..16757 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1167.1084.1 ID=prot_E-siliculosus-1a_F_contig1167.1084.1|Name=mRNA_E-siliculosus-1a_F_contig1167.1084.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=1261bp
MMAVSWAQSKVDRFEEKITGSNLGPGDYDPCLPRSQGMAGAVSLGFTSTK
GMTPLDHEQNNPATTEEVLSLPAPTSKQTTTACGFGRPRPALNVGASRLE
KVKAEQQEKQLVRLEMEREKLQEEVKTLRSLQGALAKSERHARAESAKVV
KRAQAAERKAATVIADAGRLEEAEAAASRLAAEVAAAALEAERTEAARDD
LRQRKEELASHAKDLEDRIDELVKAKAEIEFQASEAQKREEALLRDKDDL
RAANDASEARLREAKAASEASSAAAEEAARRAESAGVELAAAGDRAGELS
ALSARLEAELVGRAEELRESEDGNAALRREAAALRGEGEALAARARGLEA
ELAGARRGLEGAAQEAEAKAAELAELEKALSEERAGGAALRQELESTKEA
LAEAEGVGASLEERFEASERGAQRLARELEGAEKGLESARESVACLKGAV
TQGAADAESLRQRLGDALAEGVEYADQHTRAEERLRSSEADCAALWEERE
EAKARLCAAFVEGRALEEKLDESVAGSERLREELGRAEARLAAAAREAEE
AGDLLSASRREAAAMKEELEKMTNLFATASSEARVLKASGADVNAEVSRL
RAKLEGKESRLAECTAREEGLREYLASSEGLRGVAKAELAAAQKALNTGA
EDFVALERRLCEAEMTCERLRSGVETTELEMSERLAASEAGAASLGESLA
EAAEGRGAAAARADRLQAEADGVAEECAALREEGRVAAARREEAEAVREG
LERTVGELGSEVEGLRAAVVEKEACLEKASVAAEGHRAEAARREAEFVGL
RRVLEDVEAGHSSEHGDGSKLGRGLADTHGIGAGLGEKLVSVVEEKKDVQ
GKLEAAEGALSSSEADRERLKLEVEANESAVEGLRGEIDETRLECEALQK
AQCAMSKLEEASAEMTELKASCEGMYRVQTEGGIALREASLANRNVQRLA
SENAALVGHNNNKQKIKHLQNLKKESIRLQNEKARQASDLALAIAVLEAV
GVLPKEAETTSTAVVAKRRGRGLHSRRSSGANSLSPARFKRLEAHGGLGG
DGGEGGTQRGRSRVATTTAAATRGRKATVGGDIVPATPRSKSQIPRVSLQ
ERLLAALESAELPQIQRRGGGGKSSSSSKSKPSTSSSAADKSRPQLQEQQ
QQQQQQQQQQQKTPAMLSPTRCSHLSKPVGDVGRGGHAIGGVGVKVTAVA
EPSGPGKCDHEGEGYLSNEVIRGDVRRAILADVQLRTEVRKALLDQASGG
GGGGGGGGRA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR031794HMMR_C