prot_E-siliculosus-1a_F_contig11590.1037.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_E-siliculosus-1a_F_contig11590.1037.1
Unique Name	prot_E-siliculosus-1a_F_contig11590.1037.1
Type	polypeptide
Organism	Ectocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length	46

Homology

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BLAST of mRNA_E-siliculosus-1a_F_contig11590.1037.1 vs. uniprot
Match: A0A6H5JRR5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRR5_9PHAE)

HSP 1 Score: 92.0 bits (227), Expect = 1.380e-20
Identity = 45/46 (97.83%), Postives = 46/46 (100.00%), Query Frame = 0

Query:    1 SPNGERLLVSDTVAMQMLIFNRSVETGALRLRQRLDLPGSPDNLEI 46
            SPNGERLLVSDTVAMQMLIFNRSVETGALRLRQRLDLPGSPDN+EI
Sbjct:  398 SPNGERLLVSDTVAMQMLIFNRSVETGALRLRQRLDLPGSPDNVEI 443

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BLAST of mRNA_E-siliculosus-1a_F_contig11590.1037.1 vs. uniprot
Match: D8LTG8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTG8_ECTSI)

HSP 1 Score: 90.5 bits (223), Expect = 4.890e-20
Identity = 44/46 (95.65%), Postives = 45/46 (97.83%), Query Frame = 0

Query:    1 SPNGERLLVSDTVAMQMLIFNRSVETGALRLRQRLDLPGSPDNLEI 46
            +PNGERLLVSDT AMQMLIFNRSVETGALRLRQRLDLPGSPDNLEI
Sbjct:  445 NPNGERLLVSDTAAMQMLIFNRSVETGALRLRQRLDLPGSPDNLEI 490

The following BLAST results are available for this feature:

BLAST of mRNA_E-siliculosus-1a_F_contig11590.1037.1 vs. uniprot

BLAST of mRNA_E-siliculosus-1a_F_contig11590.1037.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A6H5JRR5_9PHAE	1.380e-20	97.83	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D8LTG8_ECTSI	4.890e-20	95.65	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011042	Six-bladed beta-propeller, TolB-like	GENE3D	2.120.10.30		coord: 1..46 e-value: 2.9E-5 score: 25.3

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E-siliculosus-1a_F_contig11590	contig	E-siliculosus-1a_F_contig11590:1596..1733 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_E-siliculosus-1a_F_contig11590.1037.1	mRNA_E-siliculosus-1a_F_contig11590.1037.1	Ectocarpus siliculosus Ec863f_EcPH12_90f female	mRNA	E-siliculosus-1a_F_contig11590 1596..1733 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_E-siliculosus-1a_F_contig11590.1037.1 ID=prot_E-siliculosus-1a_F_contig11590.1037.1|Name=mRNA_E-siliculosus-1a_F_contig11590.1037.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=46bp
SPNGERLLVSDTVAMQMLIFNRSVETGALRLRQRLDLPGSPDNLEI

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR011042	6-blade_b-propeller_TolB-like