prot_E-siliculosus-1a_F_contig1159.1034.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1159.1034.1
Unique Nameprot_E-siliculosus-1a_F_contig1159.1034.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length323
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig1159.1034.1 vs. uniprot
Match: D7G0P4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0P4_ECTSI)

HSP 1 Score: 419 bits (1076), Expect = 8.080e-145
Identity = 255/322 (79.19%), Postives = 261/322 (81.06%), Query Frame = 0 
Query:    1 MAVRVSLAAANIAGISFAGKSPRWVPNWPSLSGIDQKTLEDVFDPRHVEEYVRGNLPPSMVRKFGRRKRRVDDLVGLLRYAWARKLEHVSELARRTREKELHSAVSAALSVFTDVVEETEGEPGLLGPTPAEEFLIPSPPGAVNAAPLTEVINAAPITGITGTVGPPSDVQAGPAAIHGTGPHPAVAGAVIVSLICRQGPKGHRDRAPAAEEAGSPPREGGSVDPWQTVCRTGAGGTFMTLRFEPNTNLRGTRPARGTAGXXXXXXXXXXXXXXXXXXXXGPGGQRDRVPAAAGANSPPVHGARGQPAAGGGDVTGARGGAA 322
            MAVRVS+AAANIAGISFAGKSPRWVPNWPSLSGIDQKTLED+FDPRHVEEYVRG+LPPSMVRKF RRKRRVDDLV LLRYAWARKLEHVSELAR T EKELHSAVSAALSV TDV E  EGEPGLLGPTPAEEF   SPPGAVNAAPLT VI AAP+TGITGT GPPSDVQ GP AIH                 C QGPKGHRDRAPAAEEAGSPPREGGSVDPWQTVCRTGA               RGT    G+  XXXXXXXXXXXXXXXXXXXXGPGGQRDRVPAAAGANSP  HGARGQ  AG G+VTGA GGAA
Sbjct:    1 MAVRVSMAAANIAGISFAGKSPRWVPNWPSLSGIDQKTLEDIFDPRHVEEYVRGDLPPSMVRKFDRRKRRVDDLVDLLRYAWARKLEHVSELARLTHEKELHSAVSAALSVSTDVAEGAEGEPGLLGPTPAEEFFFLSPPGAVNAAPLTGVIIAAPVTGITGTAGPPSDVQVGPTAIH--------------EASCGQGPKGHRDRAPAAEEAGSPPREGGSVDPWQTVCRTGAAD-------------RGTERGCGSXXXXXXXXXXXXXXXXXXXXXXGPGGQRDRVPAAAGANSPLGHGARGQAEAGRGNVTGASGGAA 295
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1159.1034.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G0P4_ECTSI8.080e-14579.19Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..13
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 19..322

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1159contigE-siliculosus-1a_F_contig1159:17857..22464 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1159.1034.1mRNA_E-siliculosus-1a_F_contig1159.1034.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1159 17857..22464 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1159.1034.1 ID=prot_E-siliculosus-1a_F_contig1159.1034.1|Name=mRNA_E-siliculosus-1a_F_contig1159.1034.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=323bp
MAVRVSLAAANIAGISFAGKSPRWVPNWPSLSGIDQKTLEDVFDPRHVEE
YVRGNLPPSMVRKFGRRKRRVDDLVGLLRYAWARKLEHVSELARRTREKE
LHSAVSAALSVFTDVVEETEGEPGLLGPTPAEEFLIPSPPGAVNAAPLTE
VINAAPITGITGTVGPPSDVQAGPAAIHGTGPHPAVAGAVIVSLICRQGP
KGHRDRAPAAEEAGSPPREGGSVDPWQTVCRTGAGGTFMTLRFEPNTNLR
GTRPARGTAGRGTERGCGSAGRGTERGCRSGPGGQRDRVPAAAGANSPPV
HGARGQPAAGGGDVTGARGGAA*
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