mRNA_E-siliculosus-1a_F_contig1159.1034.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1159.1034.1 vs. uniprot
Match: D7G0P4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0P4_ECTSI) HSP 1 Score: 419 bits (1076), Expect = 8.080e-145 Identity = 255/322 (79.19%), Postives = 261/322 (81.06%), Query Frame = 1
Query: 1 MAVRVSLAAANIAGISFAGKSPRWVPNWPSLSGIDQKTLEDVFDPRHVEEYVRGNLPPSMVRKFGRRKRRVDDLVGLLRYAWARKLEHVSELARRTREKELHSAVSAALSVFTDVVEETEGEPGLLGPTPAEEFLIPSPPGAVNAAPLTEVINAAPITGITGTVGPPSDVQAGPAAIHGTGPHPAVAGAVIVSLICRQGPKGHRDRAPAAEEAGSPPREGGSVDPWQTVCRTGAGGTFMTLRFEPNTNLRGTRPARGTAGXXXXXXXXXXXXXXXXXXXXGPGGQRDRVPAAAGANSPPVHGARGQPAAGGGDVTGARGGAA 966
MAVRVS+AAANIAGISFAGKSPRWVPNWPSLSGIDQKTLED+FDPRHVEEYVRG+LPPSMVRKF RRKRRVDDLV LLRYAWARKLEHVSELAR T EKELHSAVSAALSV TDV E EGEPGLLGPTPAEEF SPPGAVNAAPLT VI AAP+TGITGT GPPSDVQ GP AIH C QGPKGHRDRAPAAEEAGSPPREGGSVDPWQTVCRTGA RGT G+ XXXXXXXXXXXXXXXXXXXXGPGGQRDRVPAAAGANSP HGARGQ AG G+VTGA GGAA
Sbjct: 1 MAVRVSMAAANIAGISFAGKSPRWVPNWPSLSGIDQKTLEDIFDPRHVEEYVRGDLPPSMVRKFDRRKRRVDDLVDLLRYAWARKLEHVSELARLTHEKELHSAVSAALSVSTDVAEGAEGEPGLLGPTPAEEFFFLSPPGAVNAAPLTGVIIAAPVTGITGTAGPPSDVQVGPTAIH--------------EASCGQGPKGHRDRAPAAEEAGSPPREGGSVDPWQTVCRTGAAD-------------RGTERGCGSXXXXXXXXXXXXXXXXXXXXXXGPGGQRDRVPAAAGANSPLGHGARGQAEAGRGNVTGASGGAA 295 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1159.1034.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1159.1034.1 >prot_E-siliculosus-1a_F_contig1159.1034.1 ID=prot_E-siliculosus-1a_F_contig1159.1034.1|Name=mRNA_E-siliculosus-1a_F_contig1159.1034.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=323bp MAVRVSLAAANIAGISFAGKSPRWVPNWPSLSGIDQKTLEDVFDPRHVEEback to top mRNA from alignment at E-siliculosus-1a_F_contig1159:17857..22464- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1159.1034.1 ID=mRNA_E-siliculosus-1a_F_contig1159.1034.1|Name=mRNA_E-siliculosus-1a_F_contig1159.1034.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=4608bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1159:17857..22464- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1159:17857..22464- >mRNA_E-siliculosus-1a_F_contig1159.1034.1 ID=mRNA_E-siliculosus-1a_F_contig1159.1034.1|Name=mRNA_E-siliculosus-1a_F_contig1159.1034.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1938bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1159:17857..22464- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |