prot_E-siliculosus-1a_F_contig1156.1013.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1156.1013.1
Unique Nameprot_E-siliculosus-1a_F_contig1156.1013.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length249
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig1156.1013.1 vs. uniprot
Match: D8LKJ3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKJ3_ECTSI)

HSP 1 Score: 322 bits (824), Expect = 5.750e-106
Identity = 203/255 (79.61%), Postives = 208/255 (81.57%), Query Frame = 0 
Query:    1 QAQELWAKAHRDESAAAAKREIARTTARLRRDAEQHASSVKETLEAAYADRMAAALEKSEESAALLSTAQKKAFRLEATTRRLEAQLAEAAERNRRMEHLSQTQNAAVKGLREDLEKRARRLARRLEEDKASHEKEREAHASELLTVKAQWKEELRTVDERVRSIVGVKDQAIERLTEGLKSSRQRAETAEALLEELQRGICPPFVPGSGSHRQSPNSSRSQHSHHHQDGRYH-------SDSLSRPVHSPEDTR 248
            +AQELWAKAHRDESAAAAKREIARTTARLRRD+EQHASSVKETLEAAYADRMAAALEKSEESAALLSTAQKKAFRLEATTRRLEAQLAEAAERNRRMEHLSQTQNAAVK L+EDLEKRARRLARRLEEDKASHEKEREAHASELLTVKAQ                     AIERLT+GLKSSRQRAETAEALLEELQRGICPPFVPGSGSHR SPN                       SDS SRPVHSPE+TR
Sbjct:  188 EAQELWAKAHRDESAAAAKREIARTTARLRRDSEQHASSVKETLEAAYADRMAAALEKSEESAALLSTAQKKAFRLEATTRRLEAQLAEAAERNRRMEHLSQTQNAAVKELKEDLEKRARRLARRLEEDKASHEKEREAHASELLTVKAQ---------------------AIERLTDGLKSSRQRAETAEALLEELQRGICPPFVPGSGSHRHSPNXXXXXXXXXXXXXXXXXXXXXXXSDSFSRPVHSPENTR 421
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1156.1013.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LKJ3_ECTSI5.750e-10679.61Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 66..100
NoneNo IPR availableCOILSCoilCoilcoord: 15..35
NoneNo IPR availableCOILSCoilCoilcoord: 105..143
NoneNo IPR availableCOILSCoilCoilcoord: 173..200

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1156contigE-siliculosus-1a_F_contig1156:319..2717 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1156.1013.1mRNA_E-siliculosus-1a_F_contig1156.1013.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1156 319..2717 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1156.1013.1 ID=prot_E-siliculosus-1a_F_contig1156.1013.1|Name=mRNA_E-siliculosus-1a_F_contig1156.1013.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=249bp
QAQELWAKAHRDESAAAAKREIARTTARLRRDAEQHASSVKETLEAAYAD
RMAAALEKSEESAALLSTAQKKAFRLEATTRRLEAQLAEAAERNRRMEHL
SQTQNAAVKGLREDLEKRARRLARRLEEDKASHEKEREAHASELLTVKAQ
WKEELRTVDERVRSIVGVKDQAIERLTEGLKSSRQRAETAEALLEELQRG
ICPPFVPGSGSHRQSPNSSRSQHSHHHQDGRYHSDSLSRPVHSPEDTR*
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