prot_E-siliculosus-1a_F_contig1154.1003.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1154.1003.1
Unique Nameprot_E-siliculosus-1a_F_contig1154.1003.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length461
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1154.1003.1 vs. uniprot
Match: A0A6H5JEW8_9PHAE (53EXOc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEW8_9PHAE)

HSP 1 Score: 515 bits (1326), Expect = 7.240e-181
Identity = 265/287 (92.33%), Postives = 269/287 (93.73%), Query Frame = 0
Query:  126 MADAPPLTHDQLPEESIYLLDGTSMLFRAFYGRGAGGYLASNGATEVGAVLAMGIEFAQFINEVKPRYVAMAFDVGRETTFRRKLYPQYKAQRKPVPLDLTLQIPLAKALSEALGCRTFEMEGYEADDVMATLARQDARAGAWLGWWGRSVGLGVVVCSSDKDMCQLVRDRVHVMQPRRDGYTILGSEEVLAKFGVKPSALPDLFGLVGDVADNIPGVKGIGQKGGSRLLENFETLEGVFAGLDGVGSMGIRGSKGLQALLSQPGIQEEAMLYREIATLDDEVPLEG 412
            MAD PPLTHDQLPEESIYLLDGTSMLFRAFYGRGAGGYLASNGATEVGAVLAMGIEFAQFINEVKPRYVAMAFDVGRETTFRRKLYPQYKAQRKPVPLDLTLQIPLAKALSEALGCRTFEMEGYEADDVMATLAR           WGRSVGLGVVVCSSDKDMCQLVRDRVHVMQPRRDGYTILGS+EVLAKFGV+PSALPDLFGL+GDVADNIPGVKGIG KGGSRLLE FETLEGVFAGLDGVGSMGIRGSKGLQ LLSQPGIQEEAMLYREIATLDDE  + G
Sbjct:    1 MADPPPLTHDQLPEESIYLLDGTSMLFRAFYGRGAGGYLASNGATEVGAVLAMGIEFAQFINEVKPRYVAMAFDVGRETTFRRKLYPQYKAQRKPVPLDLTLQIPLAKALSEALGCRTFEMEGYEADDVMATLAR-----------WGRSVGLGVVVCSSDKDMCQLVRDRVHVMQPRRDGYTILGSDEVLAKFGVQPSALPDLFGLIGDVADNIPGVKGIGPKGGSRLLEKFETLEGVFAGLDGVGSMGIRGSKGLQTLLSQPGIQEEAMLYREIATLDDEGSVSG 276          
BLAST of mRNA_E-siliculosus-1a_F_contig1154.1003.1 vs. uniprot
Match: A0A835ZC56_9STRA (5'-3' exonuclease n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZC56_9STRA)

HSP 1 Score: 213 bits (542), Expect = 4.980e-63
Identity = 111/185 (60.00%), Postives = 133/185 (71.89%), Query Frame = 0
Query:  120 VGARPAMADAPPLTHDQLPEESIYLLDGTSMLFRAFYGRGAGGYLASNGATEVGAVLAMGIEFAQFINEVKPRYVAMAFDVGRETTFRRKLYPQYKAQRKPVPLDLTLQIPLAKALSEALGCRTFEMEGYEADDVMATLARQDARAGAWLGWWGRSVGLGVVVCSSDKDMCQLVRDRVHVMQPRR 304
            V A PA        H  +P+E++++LDGTSMLFRA +G+G+  YLA++GATEV AVLAMGIE AQFI EV+PRY+A+AFDV R +TFRR+L P YKA R P P DL LQ+PLA AL++ LGC      GYEADDVMATLA            WGRS+GL VV+ S DKDM QLVR+RVHVM PRR
Sbjct:   43 VAAAPAAGGITEFKHTDVPDETLWVLDGTSMLFRAHFGKGSQSYLAADGATEVAAVLAMGIELAQFIEEVQPRYLAVAFDVDRNSTFRRQLMPTYKAHRPPHPRDLLLQLPLATALTKCLGCTCLSQRGYEADDVMATLAT-----------WGRSIGLSVVLVSEDKDMLQLVRERVHVMAPRR 216          
BLAST of mRNA_E-siliculosus-1a_F_contig1154.1003.1 vs. uniprot
Match: A0A7V4PPR6_9DELT (53EXOc domain-containing protein (Fragment) n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A7V4PPR6_9DELT)

HSP 1 Score: 175 bits (443), Expect = 6.830e-48
Identity = 113/289 (39.10%), Postives = 167/289 (57.79%), Query Frame = 0
Query:  124 PAMADAPPLTHDQLPEESIYLLDGTSMLFRAFYGRGAGGYLASNGATEVGAVLAMGIEFAQFINEVKPRYVAMAFDVGRETTFRRKLYPQYKAQRKPVPLDLTLQIPLAKALSEALGCRTFEMEGYEADDVMATLARQDARAGAWLGWWGRSVGLGVVVCSSDKDMCQLVRDRVHVMQPRRDGYTILGSEEVLAKFGVKPSALPDLFGLVGDVADNIPGVKGIGQKGGSRLLENFETLEGVFAGLDGVGSMGIRGSKGLQ-ALLSQPGIQEEAMLYREIATLDDEVPLE 411
            PAMA++P           +YL+DG+S +FRAF+   A   L+S+      A+        + +   +P Y+A+A D GR+T FR ++Y  YK  R   P  L  Q P  + + EAL     E EGYEADD++ATLARQ A          R+V   VV+ S DKD+ QLV D + ++   +D +  +G +EV  KFGV+P  + ++ GL+GD +DNIPGVKGIG+K  S L++ F TLE +F  LD +   G++G + ++ ALL+    +E A L R +AT+  +VP+E
Sbjct:   10 PAMAESP----------CVYLVDGSSYIFRAFFALPA---LSSSTGLPTNAIYGFTNMMLRLLKTYRPEYLAVALDAGRKT-FRNEIYQDYKGNRPEAPPALIPQFPYIRKVLEALRVAQVEREGYEADDLIATLARQFA---------ARAVQ--VVIVSGDKDLMQLVGDGIRLLDTAKDKW--IGPDEVREKFGVEPDKVIEVIGLMGDASDNIPGVKGIGEKSASGLIQRFRTLEYLFEHLDDLKQTGLKGVERVRKALLTG---RESAFLSRTLATVKSDVPIE 268          
BLAST of mRNA_E-siliculosus-1a_F_contig1154.1003.1 vs. uniprot
Match: A0A1F9K7W9_9DELT (53EXOc domain-containing protein n=1 Tax=Deltaproteobacteria bacterium RIFCSPLOWO2_12_FULL_57_22 TaxID=1797892 RepID=A0A1F9K7W9_9DELT)

HSP 1 Score: 174 bits (442), Expect = 1.970e-47
Identity = 100/274 (36.50%), Postives = 160/274 (58.39%), Query Frame = 0
Query:  138 PEESIYLLDGTSMLFRAFYGRGAGGYLASNGATEVGAVLAMGIEFAQFINEVKPRYVAMAFDVGRETTFRRKLYPQYKAQRKPVPLDLTLQIPLAKALSEALGCRTFEMEGYEADDVMATLARQDARAGAWLGWWGRSVGLGVVVCSSDKDMCQLVRDRVHVMQPRRDGYTILGSEEVLAKFGVKPSALPDLFGLVGDVADNIPGVKGIGQKGGSRLLENFETLEGVFAGLDGVGSMGIRGSKGLQALLSQPGIQEEAMLYREIATLDDEVPLE 411
            P   +YL+DG+S +FRAF+       L ++      A+L       +F+   KP Y+A+A D G+ET FR ++Y  YK  R   P  L  Q P  + + +A+     E+EG+EADD++ATLA+  +             GL VV+ S DKD+ QLV ++V ++   ++ +  + +  V  KFGV P  + ++ GL+GD  DNIPGVKGIG+K  S L++ +E+LE +FA LD V    ++G++ ++  L+    +EEA+L RE+AT+  +VP++
Sbjct:    4 PPPCVYLVDGSSYIFRAFFALPP---LTNSAGLPTQAILGFTTMTLKFLKTYKPEYLAVALDAGKET-FRNQIYQAYKGNRPEAPPQLIPQFPYIRKVLKAMSVVVLELEGFEADDIIATLAKDFSAR-----------GLSVVIVSGDKDLMQLVGEKVKLLDTAKEKW--IDAAAVKEKFGVAPEKVTEVMGLMGDAIDNIPGVKGIGEKTASALIQRYESLENLFAHLDDVEKSDLKGARRIRNALADR--KEEALLSRELATVRTDVPIQ 258          
BLAST of mRNA_E-siliculosus-1a_F_contig1154.1003.1 vs. uniprot
Match: A0A353MEJ4_9DELT (Ribonuclease H n=2 Tax=Geobacteraceae TaxID=213422 RepID=A0A353MEJ4_9DELT)

HSP 1 Score: 179 bits (454), Expect = 2.790e-47
Identity = 109/270 (40.37%), Postives = 154/270 (57.04%), Query Frame = 0
Query:  142 IYLLDGTSMLFRAFYGRGAGGYLASNGATEVGAVLAMGIEFAQFINEVKPRYVAMAFDVGRETTFRRKLYPQYKAQRKPVPLDLTLQIPLAKALSEALGCRTFEMEGYEADDVMATLARQDARAGAWLGWWGRSVGLGVVVCSSDKDMCQLVRDRVHVMQPRRDGYTILGSEEVLAKFGVKPSALPDLFGLVGDVADNIPGVKGIGQKGGSRLLENFETLEGVFAGLDGVGSMGIRGSKGLQALLSQPGIQEEAMLYREIATLDDEVPLE 411
            +YLLDG+S ++RA+YG       A++G     AVL       + + E +P Y A+ FD  RE TFRR +YP YKA R+ VP DL LQ+P  + + +AL     E  G+EADDV+ATLAR+ A A           G+ V V + DKD+ Q+V DR+ ++   +   +  G +EVL +FGV P  + D+ GL GD ADNIPGV GIG+K  + L++ F +LEGV   +  V     R S  L A        ++A L + +AT+  +VPLE
Sbjct:    7 LYLLDGSSYIYRAYYGFRES---ATSGGMPTNAVLGFTRMLLELVQEHRPEYFAVVFDPPREETFRRDIYPAYKAHREAVPEDLLLQLPYIRRILQALNVPALEAPGFEADDVIATLAREYAAA-----------GIEVTVVTGDKDLLQIVSDRIALLDTMKGKRS--GPQEVLDRFGVAPELVADVLGLAGDSADNIPGVPGIGEKTAAMLVQRFGSLEGVLQWITLVNGKSRRESLHLHA--------DQARLSKRLATVRYDVPLE 252          
BLAST of mRNA_E-siliculosus-1a_F_contig1154.1003.1 vs. uniprot
Match: A0A2D5BSF5_9BACT (Exodeoxyribonuclease IX n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2D5BSF5_9BACT)

HSP 1 Score: 174 bits (440), Expect = 3.020e-47
Identity = 115/302 (38.08%), Postives = 164/302 (54.30%), Query Frame = 0
Query:  142 IYLLDGTSMLFRAFYGRGAGGYLASNGATEVGAVLAMGIEFAQFINEVKPRYVAMAFDVGRETTFRRKLYPQYKAQRKPVPLDLTLQIPLAKALSEALGCRTFEMEGYEADDVMATLARQDARAGAWLGWWGRSVGLGVVVCSSDKDMCQLVRDRVHVMQPRRDGYTILGSEEVLAKFGVKPSALPDLFGLVGDVADNIPGVKGIGQKGGSRLLENFETLEGVFAGLDGVGSMGIRGSKGLQALLSQPGIQEEAMLYREIATLDDEVPLEGIDAITSSTFLYRGASPEAEGVMSALGFHAPL 443
            +++LDGT+ LFRA++        A +G  EVGAV   G    + +   +P ++A+ FD G   TFR +++P YKA R   P DL  Q  LA  L  ALG  +F  +GYEADD+MATLAR+   A           GL   + + DKD+ QLV D V V+ P+      +    V  +FGV+ S L D   L GD  DN+PGVKG+G K    L+  F +++G++  LD V ++ +RG+KGL   L +   +EEA L R +  LD+E P+E  +  T      RG    A+   S +GF +PL
Sbjct:    6 LHVLDGTAALFRAWFS--VNERPAPDGV-EVGAVWGFGQWLGKVVRRTRPTHLAVVFDAGM-WTFRNEIWPDYKANRGEPPDDLVPQFDLAYDLCVALGFPSFRTDGYEADDLMATLARRAVGA-----------GLEAALVTPDKDVLQLVSDAVCVLDPKE--LDAIDGPMVKERFGVEASQLVDYLALAGDPTDNVPGVKGVGPKTAQALIAAFGSVDGLYEDLDRVATLDVRGAKGLGDKLREH--EEEARLSRRLVVLDEEAPMEP-EIRTLGDLRLRGTPDGADRFFSRVGFPSPL 287          
BLAST of mRNA_E-siliculosus-1a_F_contig1154.1003.1 vs. uniprot
Match: A0A3N9VXZ7_9DELT (Ribonuclease H n=1 Tax=Geobacter sp. TaxID=46610 RepID=A0A3N9VXZ7_9DELT)

HSP 1 Score: 179 bits (453), Expect = 3.520e-47
Identity = 109/269 (40.52%), Postives = 159/269 (59.11%), Query Frame = 0
Query:  142 IYLLDGTSMLFRAFYGRGAGGYLASNGATEVGAVLAMGIEFAQFINEVKPRYVAMAFDVGRETTFRRKLYPQYKAQRKPVPLDLTLQIPLAKALSEALGCRTFEMEGYEADDVMATLARQDARAGAWLGWWGRSVGLGVVVCSSDKDMCQLVRDRVHVMQPRRDGYTILGSEEVLAKFGVKPSALPDLFGLVGDVADNIPGVKGIGQKGGSRLLENFETLEGVFAGLDGVGSMGIRGSKGLQALLSQPGIQEEAMLYREIATLDDEVPL 410
            ++LLDG+S ++RA+YG      LA++G     AV          + E  P Y+A+ FD  RE TFRR+LYP+YKA R  +P DL LQ+P  + + +AL     E  G+EADDV+A+LAR+ A           + GL V V + DKD+ Q+V +R+ ++   +D  +  G  EVL +FGV P  +PD+ GL GD ADNIPGV GIG+K  ++L++ F +LEGVF   D V      G K  ++L S    Q++A+L + +AT+  +V L
Sbjct:    7 LFLLDGSSYIYRAYYGVRD---LATSGGMPTNAVFGFTRMLLCLLQEHSPEYLAVVFDRPREETFRRELYPEYKANRDAMPEDLVLQVPYIRKVLQALNIPALEAPGFEADDVIASLARRSA-----------AEGLRVTVVTGDKDLMQIVGERICLLDTMKDCCS--GPLEVLERFGVPPELVPDVLGLAGDTADNIPGVPGIGEKTAAKLVKQFGSLEGVFRWKDLV-----NGKKRRESLQSY---QDQALLSKTLATVRYDVDL 251          
BLAST of mRNA_E-siliculosus-1a_F_contig1154.1003.1 vs. uniprot
Match: A0A533SDF6_9BACT (Ribonuclease H n=1 Tax=bacterium TaxID=1869227 RepID=A0A533SDF6_9BACT)

HSP 1 Score: 176 bits (445), Expect = 4.930e-46
Identity = 107/269 (39.78%), Postives = 155/269 (57.62%), Query Frame = 0
Query:  142 IYLLDGTSMLFRAFYGRGAGGYLASNGATEVGAVLAMGIEFAQFINEVKPRYVAMAFDVGRETTFRRKLYPQYKAQRKPVPLDLTLQIPLAKALSEALGCRTFEMEGYEADDVMATLARQDARAGAWLGWWGRSVGLGVVVCSSDKDMCQLVRDRVHVMQPRRDGYTILGSEEVLAKFGVKPSALPDLFGLVGDVADNIPGVKGIGQKGGSRLLENFETLEGVFAGLDGVGSMGIRGSKGLQALLSQPGIQEEAMLYREIATLDDEVPL 410
            +YLLDG+S ++RAFYG      LA++G     AV          + E  P Y+A+ FD  R+ TFRR++YP+YKA R  +P DL  QIP  + + EAL   T E  G+EADDV+ATLAR+ A             G+ V V + DKD+ Q+V D++ ++   +D  +  G +EVL +FGV P  +PD+ GL GD +DNIPGV GIG+K  ++L++ F +LEGV      V     R  + L A       Q++A+L + +AT+  +V L
Sbjct:    7 LYLLDGSSYIYRAFYGVRD---LATSGGMPTNAVFGFTRMLLGLLQEHTPEYLAVVFDRPRDETFRREIYPEYKANRDAMPEDLVPQIPYIRKVLEALNIPTLEAPGFEADDVIATLARRTAEE-----------GIRVTVVTGDKDLMQIVNDKICLLDTMKDSCS--GPQEVLERFGVPPERVPDVLGLSGDTSDNIPGVPGIGEKTAAKLVKQFGSLEGVLRWRSLVNGKKCR--ENLHAY------QDQALLSKTLATVRYDVDL 251          
BLAST of mRNA_E-siliculosus-1a_F_contig1154.1003.1 vs. uniprot
Match: A0A1G2W2X7_9DELT (Ribonuclease H n=1 Tax=Desulfuromonadaceae bacterium GWC2_58_13 TaxID=1801896 RepID=A0A1G2W2X7_9DELT)

HSP 1 Score: 174 bits (442), Expect = 1.400e-45
Identity = 109/269 (40.52%), Postives = 154/269 (57.25%), Query Frame = 0
Query:  142 IYLLDGTSMLFRAFYGRGAGGYLASNGATEVGAVLAMGIEFAQFINEVKPRYVAMAFDVGRETTFRRKLYPQYKAQRKPVPLDLTLQIPLAKALSEALGCRTFEMEGYEADDVMATLARQDARAGAWLGWWGRSVGLGVVVCSSDKDMCQLVRDRVHVMQPRRDGYTILGSEEVLAKFGVKPSALPDLFGLVGDVADNIPGVKGIGQKGGSRLLENFETLEGVFAGLDGVGSMGIRGSKGLQALLSQPGIQEEAMLYREIATLDDEVPL 410
            +YLLDG+S ++RA+YG      LA+ G   V AV          + E +P Y+A+ FD  RE TFRRK+YP YKA R  +P DL  QIP  K + +AL     E  G+EADDV+ATLAR+ A           + G+ V V + DKD+ Q+V DR+ ++   +D  +  G  EV  +FGV P  +PD+ GL GD +DNIPGV G+G+K  S L++ F +LEGVF     V      G K  + LL+    +++A L + +AT+  +V L
Sbjct:    7 LYLLDGSSYIYRAYYGFRD---LATAGGMPVNAVFGFTRMLLGLLQETRPDYLAVVFDRPREETFRRKIYPGYKAHRDAMPEDLVPQIPYIKRIVQALNIPALEAPGFEADDVIATLARRYA-----------ADGIEVTVVTGDKDLMQIVGDRIGLLDTMKDKRS--GPREVCDRFGVPPELVPDVLGLAGDASDNIPGVPGLGEKTASELVQRFGSLEGVFEWKSLVS-----GKKRRENLLAH---EDQARLSKILATVRYDVDL 251          
BLAST of mRNA_E-siliculosus-1a_F_contig1154.1003.1 vs. uniprot
Match: UPI001E2B40A7 (ribonuclease HI n=1 Tax=Geomonas sp. RF6 TaxID=2897342 RepID=UPI001E2B40A7)

HSP 1 Score: 174 bits (441), Expect = 1.840e-45
Identity = 107/276 (38.77%), Postives = 155/276 (56.16%), Query Frame = 0
Query:  136 QLPEESIYLLDGTSMLFRAFYGRGAGGYLASNGATEVGAVLAMGIEFAQFINEVKPRYVAMAFDVGRETTFRRKLYPQYKAQRKPVPLDLTLQIPLAKALSEALGCRTFEMEGYEADDVMATLARQDARAGAWLGWWGRSVGLGVVVCSSDKDMCQLVRDRVHVMQPRRDGYTILGSEEVLAKFGVKPSALPDLFGLVGDVADNIPGVKGIGQKGGSRLLENFETLEGVFAGLDGVGSMGIRGSKGLQALLSQPGIQEEAMLYREIATLDDEVPLE 411
            +LP+  +YLLDG+S ++RA+YG      LA+       A+          I E +P Y+A+AFD  RE TFRR++YPQYKA R   P DL  QIP  + + +AL     E  G+EADDV+ATLAR  A           + G+ V V + DKD+ Q+V D + ++   +D   + G EEV+ +FGV P  + D+ GL GD +DNIPGV GIG+K  ++L++ F +LEG+      V     R S    A        ++A L +++AT+  +VPLE
Sbjct:    2 KLPQ--LYLLDGSSYIYRAYYGIRE---LATTDGVSTNAIFGFTRMLLGLIQESRPDYLAVAFDPPREETFRREIYPQYKANRDATPEDLIAQIPYIRKMLDALNIPVVEAPGFEADDVIATLARSFA-----------AQGVEVTVVTGDKDLLQIVADGIRLLDTMKD--KLSGREEVVERFGVSPEQVADVLGLAGDASDNIPGVPGIGEKTAAKLVQQFGSLEGILKWSSLVNGKSRRESLHRHA--------DQARLSKKLATVRYDVPLE 251          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1154.1003.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JEW8_9PHAE7.240e-18192.3353EXOc domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A835ZC56_9STRA4.980e-6360.005'-3' exonuclease n=1 Tax=Tribonema minus TaxID=30... [more]
A0A7V4PPR6_9DELT6.830e-4839.1053EXOc domain-containing protein (Fragment) n=1 Ta... [more]
A0A1F9K7W9_9DELT1.970e-4736.5053EXOc domain-containing protein n=1 Tax=Deltaprot... [more]
A0A353MEJ4_9DELT2.790e-4740.37Ribonuclease H n=2 Tax=Geobacteraceae TaxID=213422... [more]
A0A2D5BSF5_9BACT3.020e-4738.08Exodeoxyribonuclease IX n=1 Tax=Planctomycetes bac... [more]
A0A3N9VXZ7_9DELT3.520e-4740.52Ribonuclease H n=1 Tax=Geobacter sp. TaxID=46610 R... [more]
A0A533SDF6_9BACT4.930e-4639.78Ribonuclease H n=1 Tax=bacterium TaxID=1869227 Rep... [more]
A0A1G2W2X7_9DELT1.400e-4540.52Ribonuclease H n=1 Tax=Desulfuromonadaceae bacteri... [more]
UPI001E2B40A71.840e-4538.77ribonuclease HI n=1 Tax=Geomonas sp. RF6 TaxID=289... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008918Helix-hairpin-helix motif, class 2SMARTSM00279HhH_4coord: 323..358
e-value: 2.2E-8
score: 43.9
IPR0024215'-3' exonuclease, N-terminalSMARTSM0047553exo3coord: 142..419
e-value: 1.4E-71
score: 253.8
IPR0200465'-3' exonuclease, alpha-helical arch, N-terminalPFAMPF027395_3_exonuc_Ncoord: 142..320
e-value: 1.8E-40
score: 138.5
NoneNo IPR availableGENE3D1.10.150.20coord: 324..405
e-value: 1.6E-64
score: 219.7
NoneNo IPR availableGENE3D3.40.50.1010coord: 143..411
e-value: 1.6E-64
score: 219.7
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 11..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 23..34
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 35..460
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..34
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..10
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..27
score: 0.653
IPR020045DNA polymerase I-like, H3TH domainPFAMPF013675_3_exonuccoord: 321..411
e-value: 2.8E-17
score: 63.1
IPR038969Flap endonucleasePANTHERPTHR42646FAMILY NOT NAMEDcoord: 140..444
IPR0362795'-3' exonuclease, C-terminal domain superfamilySUPERFAMILY478075' to 3' exonuclease, C-terminal subdomaincoord: 321..414
IPR029060PIN-like domain superfamilySUPERFAMILY88723PIN domain-likecoord: 141..305

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1154contigE-siliculosus-1a_F_contig1154:859..6874 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1154.1003.1mRNA_E-siliculosus-1a_F_contig1154.1003.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1154 859..8072 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1154.1003.1 ID=prot_E-siliculosus-1a_F_contig1154.1003.1|Name=mRNA_E-siliculosus-1a_F_contig1154.1003.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=461bp
MRRGPRRAVRTPLFALSLALHANLTSSLLHHLLATPVGDAISRNHATATV
AAAGTAAGRRRRARPRPAWHFHGNVSPPGRGQSSTSPRCSVRSGPEVAAA
AAAEGENGGPDAAAAEGRSVGARPAMADAPPLTHDQLPEESIYLLDGTSM
LFRAFYGRGAGGYLASNGATEVGAVLAMGIEFAQFINEVKPRYVAMAFDV
GRETTFRRKLYPQYKAQRKPVPLDLTLQIPLAKALSEALGCRTFEMEGYE
ADDVMATLARQDARAGAWLGWWGRSVGLGVVVCSSDKDMCQLVRDRVHVM
QPRRDGYTILGSEEVLAKFGVKPSALPDLFGLVGDVADNIPGVKGIGQKG
GSRLLENFETLEGVFAGLDGVGSMGIRGSKGLQALLSQPGIQEEAMLYRE
IATLDDEVPLEGIDAITSSTFLYRGASPEAEGVMSALGFHAPLRMIQEGS
KRPSARASTV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029060PIN-like_dom_sf
IPR0362795-3_exonuclease_C_sf
IPR038969FEN_bact-like
IPR020045DNA_polI_H3TH
IPR0200465-3_exonucl_a-hlix_arch_N
IPR0024215-3_exonuclease_N
IPR008918HhH2