prot_E-siliculosus-1a_F_contig11527.1000.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig11527.1000.1
Unique Nameprot_E-siliculosus-1a_F_contig11527.1000.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length182
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig11527.1000.1 vs. uniprot
Match: Q8QN74_ESV1K (EsV-1-216 n=1 Tax=Ectocarpus siliculosus virus 1 (isolate New Zealand/Kaikoura/1988) TaxID=654926 RepID=Q8QN74_ESV1K)

HSP 1 Score: 230 bits (587), Expect = 1.530e-73
Identity = 157/180 (87.22%), Postives = 161/180 (89.44%), Query Frame = 0 
Query:    1 ASALTDRVTSVEQEVALVSSASDEISALESAATAVSNRVDATEXXXXXXXXXXXXXXXXXXXXXXXXXXLEQQDTSLVSTISDLSARVTTAENAIDAVNTSLALAIQKIDTLGSQDLESRVDALEENDPIGVADRVYLVSNATNRMMYATASTANANGTVTNEYTSWKMYKETPDAQAIV 180
            ASALTDRVTSVEQ VA VSS   EISALESAATAVSNRVDATE       XXXXXXXXXXXXXXXXXXXLEQ+DTSL STISDLSARVTTAENAIDAVNTSLALAIQ+IDTL SQDL SRVD+LEENDPIGVADRVYLVSNATNRMMYAT STANANG VTNEYTSWKMYKET  AQA+V
Sbjct:   69 ASALTDRVTSVEQGVAAVSSVPGEISALESAATAVSNRVDATEDDIVAQVXXXXXXXXXXXXXXXXXXXLEQKDTSLASTISDLSARVTTAENAIDAVNTSLALAIQRIDTLESQDLGSRVDSLEENDPIGVADRVYLVSNATNRMMYATTSTANANGVVTNEYTSWKMYKETSAAQAVV 248
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BLAST of mRNA_E-siliculosus-1a_F_contig11527.1000.1 vs. uniprot
Match: D8LP34_ECTSI (EsV-1-216 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP34_ECTSI)

HSP 1 Score: 164 bits (414), Expect = 9.660e-48
Identity = 109/157 (69.43%), Postives = 113/157 (71.97%), Query Frame = 0 
Query:   24 EISALESAATAVSNRVDATEXXXXXXXXXXXXXXXXXXXXXXXXXXLEQQDTSLVSTISDLSARVTTAENAIDAVNTSLALAIQKIDTLGSQDLESRVDALEENDPIGVADRVYLVSNATNRMMYATASTANANGTVTNEYTSWKMYKETPDAQAIV 180
            EISALESAATAVSNR     XXXXX                     LEQQDTSL STISDL+ARVTTAENAIDAV TSL LAIQ+I+TL            EENDPIGVADRVYLVSNAT+RMMYATASTANAN TVTNEYTSWKMYKET DAQA V
Sbjct:   91 EISALESAATAVSNRXXXXXXXXXX---------------------LEQQDTSLASTISDLTARVTTAENAIDAVTTSLTLAIQRIETL------------EENDPIGVADRVYLVSNATSRMMYATASTANANSTVTNEYTSWKMYKETSDAQAAV 214
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig11527.1000.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
Q8QN74_ESV1K1.530e-7387.22EsV-1-216 n=1 Tax=Ectocarpus siliculosus virus 1 (... [more]
D8LP34_ECTSI9.660e-4869.43EsV-1-216 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.20.5.340coord: 1..81
e-value: 4.0E-6
score: 28.8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig11527contigE-siliculosus-1a_F_contig11527:3..548 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig11527.1000.1mRNA_E-siliculosus-1a_F_contig11527.1000.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig11527 3..548 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig11527.1000.1 ID=prot_E-siliculosus-1a_F_contig11527.1000.1|Name=mRNA_E-siliculosus-1a_F_contig11527.1000.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=182bp
ASALTDRVTSVEQEVALVSSASDEISALESAATAVSNRVDATEDDIVAQV
SATTALSTRVGATEDDIAALEQQDTSLVSTISDLSARVTTAENAIDAVNT
SLALAIQKIDTLGSQDLESRVDALEENDPIGVADRVYLVSNATNRMMYAT
ASTANANGTVTNEYTSWKMYKETPDAQAIVK*
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