prot_E-siliculosus-1a_F_contig11525.999.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig11525.999.1
Unique Nameprot_E-siliculosus-1a_F_contig11525.999.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length66
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig11525.999.1 vs. uniprot
Match: A0A024URA4_9STRA (ULP_PROTEASE domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024URA4_9STRA)

HSP 1 Score: 50.8 bits (120), Expect = 1.080e-5
Identity = 25/59 (42.37%), Postives = 35/59 (59.32%), Query Frame = 0 
Query:    1 RGTRGNPILFYYPLESTARDRIPIDSVDIGRTEPMEWLNDNLVNVGLRSVDVCEATSAA 59
            R   G+PI+  YPL   A D I I   D+ R +PME+LNDNLV+   + + + +  SAA
Sbjct:  496 RAVEGSPIVLTYPLPPNATDVISITRADLDRLQPMEYLNDNLVDYYFKWLVMADMPSAA 554
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BLAST of mRNA_E-siliculosus-1a_F_contig11525.999.1 vs. uniprot
Match: A0A024UNX3_9STRA (ULP_PROTEASE domain-containing protein n=4 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UNX3_9STRA)

HSP 1 Score: 50.8 bits (120), Expect = 1.090e-5
Identity = 25/59 (42.37%), Postives = 35/59 (59.32%), Query Frame = 0 
Query:    1 RGTRGNPILFYYPLESTARDRIPIDSVDIGRTEPMEWLNDNLVNVGLRSVDVCEATSAA 59
            R   G+PI+  YPL   A D I I   D+ R +PME+LNDNLV+   + + + +  SAA
Sbjct:  496 RAVEGSPIVLTYPLPPNATDVISITRADLDRLQPMEYLNDNLVDYYFKWLVMADMPSAA 554
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig11525.999.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A024URA4_9STRA1.080e-542.37ULP_PROTEASE domain-containing protein n=1 Tax=Aph... [more]
A0A024UNX3_9STRA1.090e-542.37ULP_PROTEASE domain-containing protein n=4 Tax=Aph... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig11525contigE-siliculosus-1a_F_contig11525:605..802 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig11525.999.1mRNA_E-siliculosus-1a_F_contig11525.999.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig11525 605..802 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig11525.999.1 ID=prot_E-siliculosus-1a_F_contig11525.999.1|Name=mRNA_E-siliculosus-1a_F_contig11525.999.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=66bp
RGTRGNPILFYYPLESTARDRIPIDSVDIGRTEPMEWLNDNLVNVGLRSV
DVCEATSAAVVIHNF*
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