prot_E-siliculosus-1a_F_contig115.977.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig115.977.1
Unique Nameprot_E-siliculosus-1a_F_contig115.977.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length313
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig115.977.1 vs. uniprot
Match: A0A6H5JQW8_9PHAE (DUF2470 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JQW8_9PHAE)

HSP 1 Score: 594 bits (1531), Expect = 5.190e-214
Identity = 298/312 (95.51%), Postives = 303/312 (97.12%), Query Frame = 0 
Query:    1 MHTSSAAATGAAHARAAALSLVLWLFLNTPTTCGFQATTMMVARASWKEYWLAKNGAKNDPAAVPSTRGAARRSSRTRWEPTRPAWWIAKSPAKVQGAPPVLATPDLDGGSFDKDQITDVLQHEYRHNLVRVAQKYDSLIESVEGVDAITIKELDGDHMQLDVVYCDQGERTCVAVAVPVIFPYHCNDADCVIGVIHELEKAENVEPRPAMANVPPKYVSPELIGTIARICVVMNRDFQDELRNFVRAFGGPVADEMVGNCEMLSLSPDGFMVRSEANPDKPVSIAFSKECQSASDFQKQILLVSERAMAIA 312
            MHTSSAAA+ AAHARAAALSLVL LF NTPTTCGFQ TTMMVARASWKEYWLAKNGAKN PAAVPSTRGAARRSSRTRWEPTRPAWWIAKSPAKVQG+PPVL TP LDGGSFDK+QITDVLQHEYRHNLVRVAQKYDSLIESVEGVDAITIKELDGDHMQLDVVYCDQGERTCVAVAVPVIFPYHCNDADCVIGVIHELE+AENVEPRPAMANVPPKYVSPELIGTIARIC VMNRDFQDELRNFVRAFGGPVADEMVGNCEMLSLSPDGFMVRS+ANPDKPVSIAFSKECQSA DFQKQILLVSERAMAIA
Sbjct:    1 MHTSSAAASRAAHARAAALSLVLCLFFNTPTTCGFQTTTMMVARASWKEYWLAKNGAKNAPAAVPSTRGAARRSSRTRWEPTRPAWWIAKSPAKVQGSPPVLETPVLDGGSFDKEQITDVLQHEYRHNLVRVAQKYDSLIESVEGVDAITIKELDGDHMQLDVVYCDQGERTCVAVAVPVIFPYHCNDADCVIGVIHELEQAENVEPRPAMANVPPKYVSPELIGTIARICAVMNRDFQDELRNFVRAFGGPVADEMVGNCEMLSLSPDGFMVRSDANPDKPVSIAFSKECQSALDFQKQILLVSERAMAIA 312
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig115.977.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JQW8_9PHAE5.190e-21495.51DUF2470 domain-containing protein n=2 Tax=Ectocarp... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019595Domain of unknown function DUF2470PFAMPF10615DUF2470coord: 228..300
e-value: 1.4E-7
score: 32.0
IPR037119Haem oxygenase HugZ-like superfamilyGENE3D3.20.180.10coord: 226..307
e-value: 9.9E-8
score: 33.8
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 46..312
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..45
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..15
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 28..45
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 16..27
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..34
score: 0.788
NoneNo IPR availableTMHMMTMhelixcoord: 21..43

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig115contigE-siliculosus-1a_F_contig115:40448..44142 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig115.977.1mRNA_E-siliculosus-1a_F_contig115.977.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig115 38634..44279 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig115.977.1 ID=prot_E-siliculosus-1a_F_contig115.977.1|Name=mRNA_E-siliculosus-1a_F_contig115.977.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=313bp
MHTSSAAATGAAHARAAALSLVLWLFLNTPTTCGFQATTMMVARASWKEY
WLAKNGAKNDPAAVPSTRGAARRSSRTRWEPTRPAWWIAKSPAKVQGAPP
VLATPDLDGGSFDKDQITDVLQHEYRHNLVRVAQKYDSLIESVEGVDAIT
IKELDGDHMQLDVVYCDQGERTCVAVAVPVIFPYHCNDADCVIGVIHELE
KAENVEPRPAMANVPPKYVSPELIGTIARICVVMNRDFQDELRNFVRAFG
GPVADEMVGNCEMLSLSPDGFMVRSEANPDKPVSIAFSKECQSASDFQKQ
ILLVSERAMAIA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR037119Haem_oxidase_HugZ-like_sf
IPR019595DUF2470