prot_E-siliculosus-1a_F_contig1148.960.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1148.960.1
Unique Nameprot_E-siliculosus-1a_F_contig1148.960.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length50
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig1148.960.1 vs. uniprot
Match: D7FVK3_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVK3_ECTSI)

HSP 1 Score: 61.2 bits (147), Expect = 1.160e-9
Identity = 31/37 (83.78%), Postives = 33/37 (89.19%), Query Frame = 0 
Query:    1 DHPGVVSILLSKGASVSATNDDGNTALHLSAFKGSLV 37
            DHP VVSILLSKGASVSA ND+GNTALHLSAF G +V
Sbjct:   59 DHPSVVSILLSKGASVSAINDEGNTALHLSAFAGYVV 95
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BLAST of mRNA_E-siliculosus-1a_F_contig1148.960.1 vs. uniprot
Match: A0A6H5L1C9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1C9_9PHAE)

HSP 1 Score: 59.3 bits (142), Expect = 5.260e-9
Identity = 33/41 (80.49%), Postives = 34/41 (82.93%), Query Frame = 0 
Query:    1 DHPGVVSILL-SKGASVSATNDDGNTALHLSAFKGSLVVTK 40
            DHPGVVSILL SKGAS SATNDDGNTAL  S FK + VVTK
Sbjct:   26 DHPGVVSILLLSKGASASATNDDGNTALRFSVFKRNPVVTK 66
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1148.960.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FVK3_ECTSI1.160e-983.78EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
A0A6H5L1C9_9PHAE5.260e-980.49Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 1..49
e-value: 7.1E-12
score: 47.3
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 2..48
NoneNo IPR availablePFAMPF13637Ank_4coord: 4..36
e-value: 9.9E-7
score: 29.2
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 1..49
score: 16.388
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 22..49
score: 10.499

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1148contigE-siliculosus-1a_F_contig1148:2219..2368 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1148.960.1mRNA_E-siliculosus-1a_F_contig1148.960.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1148 2219..2488 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1148.960.1 ID=prot_E-siliculosus-1a_F_contig1148.960.1|Name=mRNA_E-siliculosus-1a_F_contig1148.960.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=50bp
DHPGVVSILLSKGASVSATNDDGNTALHLSAFKGSLVVTKMSLKAGASV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR020683Ankyrin_rpt-contain_dom
IPR036770Ankyrin_rpt-contain_sf