prot_E-siliculosus-1a_F_contig1147.958.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1147.958.1
Unique Nameprot_E-siliculosus-1a_F_contig1147.958.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length354
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig1147.958.1 vs. uniprot
Match: D7G3R6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G3R6_ECTSI)

HSP 1 Score: 614 bits (1584), Expect = 1.150e-220
Identity = 320/352 (90.91%), Postives = 325/352 (92.33%), Query Frame = 0 
Query:    1 MIEETPMNATALLLQTRTSSTDSSVSPKPRWSKGVPPTCENTEPNKPAPAALVSSTSSCDDDGRSPNTTKLLLESHTSTDGHISPKPRWTRGNPNTETDTGADGDKLDESXXXXXXXXXXXXXXXXXEEPLPTSLRPGGRSSNASSSSGGDRKWCMAWKWLLEDEAASEKRLQRPTGDEPVVLPKLIDAERELLCRNVELRLLEVGRQSTDIPALVEEYLRFMFLRKRLEGMLTLDPSPLVDDVWQAHITSDREYAAFCERTFGGEGLECGLPHREADASQPMLYENTVGAYEHFFGAVAPFEWWPAPAVVAGAACTALDGKGEEEEGPVDVSGRRTAFVRTEERKFHFAEE 352
            MIEETPMNATALLLQTRTSSTDSSVSPKPRWSKG PPTCENTEPNKPAPAA VSSTSSCDDD RSPNTTKLLLESHTSTDGHISPKPRWTRGNPNTE DTGADGDKLDES XXXXXXXXX       EEPLPTSLRPGGRSSNAS SS GDRKW MAW+WLLEDEAASE RLQRPT  +P VLPKL+DAER+LLCRNVELRLLEVGR STDIPALVEEYLRFMFLRKRLEGMLTLDPSPLVD VWQAHITSDREYAAFCERTFGGEGLECG+PHRE DASQPMLYENTVGAYEHFFGAVAPFE WPAPAVV G ACTALDGKGEEEE PVDVSGRRTAFVRTEERK HFAEE
Sbjct:    4 MIEETPMNATALLLQTRTSSTDSSVSPKPRWSKGAPPTCENTEPNKPAPAAPVSSTSSCDDDERSPNTTKLLLESHTSTDGHISPKPRWTRGNPNTEPDTGADGDKLDESSXXXXXXXXXASSEDGREEPLPTSLRPGGRSSNASGSSCGDRKWYMAWRWLLEDEAASEPRLQRPTEADPAVLPKLMDAERQLLCRNVELRLLEVGRHSTDIPALVEEYLRFMFLRKRLEGMLTLDPSPLVDVVWQAHITSDREYAAFCERTFGGEGLECGVPHREVDASQPMLYENTVGAYEHFFGAVAPFECWPAPAVVVGGACTALDGKGEEEEAPVDVSGRRTAFVRTEERKVHFAEE 355
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BLAST of mRNA_E-siliculosus-1a_F_contig1147.958.1 vs. uniprot
Match: UPI0003A3859B (TIGR04222 domain-containing membrane protein n=1 Tax=Xanthomonas maliensis TaxID=1321368 RepID=UPI0003A3859B)

HSP 1 Score: 58.2 bits (139), Expect = 1.140e-5
Identity = 42/113 (37.17%), Postives = 52/113 (46.02%), Query Frame = 0 
Query:  215 LVEEYLRFMFLRKRLEGMLTLDPSPLVDDVWQAHITSDREY-AAFCERTFGGEGLECGLPHREADASQ--PML---YENTVGAYEHFFGAVAPFEWWPAPAVVAGAACTALDG 321
            L++EY RF FL    +   +  PSPLVD VW AH+T  REY   FC +      L+  L H     +   P L   Y+ T+  Y H FG   P   WP P   A     A DG
Sbjct:   55 LLDEYRRFCFLACSSDEEAS--PSPLVDQVWHAHLTDTREYWQRFCPQI-----LQATLHHHPGSGADDAPRLRAQYQRTLERYRHHFGEP-PLACWPPPRPTAPPVAPAADG 159
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1147.958.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G3R6_ECTSI1.150e-22090.91Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
UPI0003A3859B1.140e-537.17TIGR04222 domain-containing membrane protein n=1 T... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1147contigE-siliculosus-1a_F_contig1147:18831..21089 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1147.958.1mRNA_E-siliculosus-1a_F_contig1147.958.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1147 18672..22917 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1147.958.1 ID=prot_E-siliculosus-1a_F_contig1147.958.1|Name=mRNA_E-siliculosus-1a_F_contig1147.958.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=354bp
MIEETPMNATALLLQTRTSSTDSSVSPKPRWSKGVPPTCENTEPNKPAPA
ALVSSTSSCDDDGRSPNTTKLLLESHTSTDGHISPKPRWTRGNPNTETDT
GADGDKLDESSSSSSTTATVASSDDGREEPLPTSLRPGGRSSNASSSSGG
DRKWCMAWKWLLEDEAASEKRLQRPTGDEPVVLPKLIDAERELLCRNVEL
RLLEVGRQSTDIPALVEEYLRFMFLRKRLEGMLTLDPSPLVDDVWQAHIT
SDREYAAFCERTFGGEGLECGLPHREADASQPMLYENTVGAYEHFFGAVA
PFEWWPAPAVVAGAACTALDGKGEEEEGPVDVSGRRTAFVRTEERKFHFA
EEG*
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