prot_E-siliculosus-1a_F_contig11443.949.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig11443.949.1
Unique Nameprot_E-siliculosus-1a_F_contig11443.949.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length95
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig11443.949.1 vs. uniprot
Match: D8LSM6_ECTSI (GTPase Der n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LSM6_ECTSI)

HSP 1 Score: 68.2 bits (165), Expect = 2.650e-11
Identity = 29/35 (82.86%), Postives = 32/35 (91.43%), Query Frame = 0 
Query:   61 DRVLVDRIQSDGHACVVVCNKWDLMEDEDDPTYNK 95
            DRVL DRIQSDG ACVVVCNKWDL+ED+DD +YNK
Sbjct:  497 DRVLADRIQSDGRACVVVCNKWDLVEDKDDSSYNK 531
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig11443.949.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LSM6_ECTSI2.650e-1182.86GTPase Der n=2 Tax=Ectocarpus TaxID=2879 RepID=D8L... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..15
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..20
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 21..95
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..20
score: 0.459

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig11443contigE-siliculosus-1a_F_contig11443:476..1424 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig11443.949.1mRNA_E-siliculosus-1a_F_contig11443.949.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig11443 476..1571 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig11443.949.1 ID=prot_E-siliculosus-1a_F_contig11443.949.1|Name=mRNA_E-siliculosus-1a_F_contig11443.949.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=95bp
MTSMQPFSALAFRIITVAKALPGMHHVLGLGKYITPTGAHSNRRWSAGSP
QPRHSSDAQMDRVLVDRIQSDGHACVVVCNKWDLMEDEDDPTYNK
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