prot_E-siliculosus-1a_F_contig11366.902.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig11366.902.1
Unique Nameprot_E-siliculosus-1a_F_contig11366.902.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length53
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig11366.902.1 vs. uniprot
Match: D8LJP6_ECTSI (Zn-finger (Ran-binding)-3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJP6_ECTSI)

HSP 1 Score: 106 bits (264), Expect = 2.340e-28
Identity = 52/52 (100.00%), Postives = 52/52 (100.00%), Query Frame = 0
Query:    1 MLVQAAKTPSAYLSSFHAFVLANALRRPILVYGDRFVRGRNGEPYAPSDVRG 52
            MLVQAAKTPSAYLSSFHAFVLANALRRPILVYGDRFVRGRNGEPYAPSDVRG
Sbjct:   12 MLVQAAKTPSAYLSSFHAFVLANALRRPILVYGDRFVRGRNGEPYAPSDVRG 63          
BLAST of mRNA_E-siliculosus-1a_F_contig11366.902.1 vs. uniprot
Match: A0A6H5JBZ3_9PHAE (OTU domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBZ3_9PHAE)

HSP 1 Score: 104 bits (260), Expect = 6.620e-25
Identity = 51/52 (98.08%), Postives = 51/52 (98.08%), Query Frame = 0
Query:    1 MLVQAAKTPSAYLSSFHAFVLANALRRPILVYGDRFVRGRNGEPYAPSDVRG 52
            MLVQAAKTPSAYLSSFHAFVLAN LRRPILVYGDRFVRGRNGEPYAPSDVRG
Sbjct:  113 MLVQAAKTPSAYLSSFHAFVLANVLRRPILVYGDRFVRGRNGEPYAPSDVRG 164          
BLAST of mRNA_E-siliculosus-1a_F_contig11366.902.1 vs. uniprot
Match: D7G8I7_ECTSI (OTU domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8I7_ECTSI)

HSP 1 Score: 66.2 bits (160), Expect = 1.410e-11
Identity = 32/53 (60.38%), Postives = 41/53 (77.36%), Query Frame = 0
Query:    1 MLVQAAKTPSAYLSSFHAFVLANALRRPILVYGDRFVRG-RNGEPYAPSDVRG 52
            ML++A KTPSA+LSSFH FV A+ LRRPI+VYG+ +V G  N E + PSD+ G
Sbjct:  170 MLMEAVKTPSAHLSSFHVFVFAHVLRRPIVVYGETYVYGANNSEAFVPSDMPG 222          
BLAST of mRNA_E-siliculosus-1a_F_contig11366.902.1 vs. uniprot
Match: A0A6H5L7A1_9PHAE (OTU domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7A1_9PHAE)

HSP 1 Score: 64.3 bits (155), Expect = 8.560e-11
Identity = 32/53 (60.38%), Postives = 40/53 (75.47%), Query Frame = 0
Query:    1 MLVQAAKTPSAYLSSFHAFVLANALRRPILVYGDRFVRG-RNGEPYAPSDVRG 52
            M+++A KTPSA+LSSFH FVLA+ LRRPI+VYG   V G  N E + PSD+ G
Sbjct:  199 MVMEAVKTPSAHLSSFHVFVLAHVLRRPIVVYGKNHVYGANNSEAFVPSDMPG 251          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig11366.902.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LJP6_ECTSI2.340e-28100.00Zn-finger (Ran-binding)-3 n=1 Tax=Ectocarpus silic... [more]
A0A6H5JBZ3_9PHAE6.620e-2598.08OTU domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7G8I7_ECTSI1.410e-1160.38OTU domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5L7A1_9PHAE8.560e-1160.38OTU domain-containing protein n=1 Tax=Ectocarpus s... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig11366contigE-siliculosus-1a_F_contig11366:329..487 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig11366.902.1mRNA_E-siliculosus-1a_F_contig11366.902.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig11366 329..496 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig11366.902.1 ID=prot_E-siliculosus-1a_F_contig11366.902.1|Name=mRNA_E-siliculosus-1a_F_contig11366.902.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=53bp
MLVQAAKTPSAYLSSFHAFVLANALRRPILVYGDRFVRGRNGEPYAPSDV
RG*
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