prot_E-siliculosus-1a_F_contig1135.893.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1135.893.1
Unique Nameprot_E-siliculosus-1a_F_contig1135.893.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length458
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig1135.893.1 vs. uniprot
Match: D7FSN1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSN1_ECTSI)

HSP 1 Score: 540 bits (1390), Expect = 2.500e-190
Identity = 263/277 (94.95%), Postives = 269/277 (97.11%), Query Frame = 0 
Query:    1 MGSSTPMHAMLCIVVLFVGAPAAVEGLAAKGVYYFDDECGQGQETGTYYLAFGSYNPDPESNTSSREPFNECYVDTSTTVLDGRSLVYTCNLSTGETKLTVYEDQECSDFYLSTGGTGSCSVADISDDDDGDVCLEEEACSSNETCTDDDPFAISPNAFNVVAAQYSDDKCTVPTGVDDVVSGYDVSAPGFSSEGCFPPELDPEVPTPSLPFLSECLSDGSAVIQLFGLSDLTCSGEVQLEYHTNFTPHMSSGPDMRRMADAADSCYLIGDYYYRPV 277
            MGSSTPMHAML IVVLFVGAPAAVEGLAAKGVYYFDDECGQGQETGTYYLAFGSYNPDPESNTSSREPFNECYVDTSTT+LDGRSLVYTCNLSTGETKLTVYEDQEC D YLSTGGTGSCSVADI DDDDGDVCLEEEACSSNETCTDD+PFA+SPNAFNVVAAQYSDDKCTVPTGVD VVSGYDVSAPGFS+EGCFPPE DPEVP PSLPFLSECLSDGSAVIQLFGLSDLTCSGEVQLEYHTNFTPHMSSGPDMRRMADAADSCYL+GDY+YR V
Sbjct:   16 MGSSTPMHAMLRIVVLFVGAPAAVEGLAAKGVYYFDDECGQGQETGTYYLAFGSYNPDPESNTSSREPFNECYVDTSTTILDGRSLVYTCNLSTGETKLTVYEDQECLDVYLSTGGTGSCSVADIFDDDDGDVCLEEEACSSNETCTDDEPFALSPNAFNVVAAQYSDDKCTVPTGVDHVVSGYDVSAPGFSTEGCFPPESDPEVPAPSLPFLSECLSDGSAVIQLFGLSDLTCSGEVQLEYHTNFTPHMSSGPDMRRMADAADSCYLVGDYHYRAV 292
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BLAST of mRNA_E-siliculosus-1a_F_contig1135.893.1 vs. uniprot
Match: A0A6H5K9P6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9P6_9PHAE)

HSP 1 Score: 287 bits (734), Expect = 2.250e-90
Identity = 148/201 (73.63%), Postives = 155/201 (77.11%), Query Frame = 0 
Query:   75 DTSTTVLDGRSLVYTCNLSTGETKLTVYEDQECSDFYLSTGGTGSCSVADISDDDDGDVCLEEEACSSNETCTDDDPFAISPNAFNVVAAQYSDDKCTVPTGVDDVVSGYDVSAPGFSSEGCFPPELDPEVPTPSLPFLSECLSDGSAVIQLFGLSDLTCSGEVQLEYHTNFTPHMSSGPDMRRMADAADSCYLIGDYYYR 275
            DTSTT+LDGRSL YTCNLSTGETK+TVYEDQE SDFYLSTGGTGSCSVADI DDDDGDVCLEEEACSSNETCTDD+P AISPNAFNVVAA+YSDDKCTVPTGVD VVSG DVSA GFS+EGCF                                       EVQLEYHTNFTPHMSSGPDMRRMADAADSCYL+GDYY+R
Sbjct:  169 DTSTTILDGRSLAYTCNLSTGETKVTVYEDQEWSDFYLSTGGTGSCSVADIFDDDDGDVCLEEEACSSNETCTDDEPIAISPNAFNVVAARYSDDKCTVPTGVDHVVSGCDVSASGFSTEGCF--------------------------------HQNRIQREVQLEYHTNFTPHMSSGPDMRRMADAADSCYLVGDYYHR 337
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1135.893.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FSN1_ECTSI2.500e-19094.95Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K9P6_9PHAE2.250e-9073.63Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..28
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 21..28
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 9..20
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 29..457
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..8
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..26
score: 0.747

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1135contigE-siliculosus-1a_F_contig1135:28731..36749 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1135.893.1mRNA_E-siliculosus-1a_F_contig1135.893.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1135 28731..36749 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1135.893.1 ID=prot_E-siliculosus-1a_F_contig1135.893.1|Name=mRNA_E-siliculosus-1a_F_contig1135.893.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=458bp
MGSSTPMHAMLCIVVLFVGAPAAVEGLAAKGVYYFDDECGQGQETGTYYL
AFGSYNPDPESNTSSREPFNECYVDTSTTVLDGRSLVYTCNLSTGETKLT
VYEDQECSDFYLSTGGTGSCSVADISDDDDGDVCLEEEACSSNETCTDDD
PFAISPNAFNVVAAQYSDDKCTVPTGVDDVVSGYDVSAPGFSSEGCFPPE
LDPEVPTPSLPFLSECLSDGSAVIQLFGLSDLTCSGEVQLEYHTNFTPHM
SSGPDMRRMADAADSCYLIGDYYYRPVSCTLDAVTVEGSTATPSPVEPTP
SPTDDGAARDIPGGVDSSPAPTADAPTASGEVVPSSPSPVASPTPPPSSG
TSPSPVASPTPPPSSVTSPSPTPGETSPPAASLTPSPSSQTTPSPSPTSG
EASMVPATAATEAPTTVAVESATSGATAVRIAGIRTIAVTLSCWSAVLVT
LMYCTAD*
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