prot_E-siliculosus-1a_F_contig1135.892.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1135.892.1
Unique Nameprot_E-siliculosus-1a_F_contig1135.892.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length156
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1135.892.1 vs. uniprot
Match: D7FSN0_ECTSI (Mitochondrial import inner membrane translocase subunit TIM16 homolog n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FSN0_ECTSI)

HSP 1 Score: 261 bits (668), Expect = 1.140e-87
Identity = 154/155 (99.35%), Postives = 154/155 (99.35%), Query Frame = 0
Query:    1 MANPFARIIAQLAVASAGIVSRAFVSAYSQAVHNARTGTLESAKAMSRTSKLSTLEAMQILNLQKGEMKPDLIKQRYDQYFGINDPDKGGSFYLQSKVFRAKEALDEQLALQAKQASEEAALKAKAAAGGKXXXXXAKARPAEGGARRPSANRRR 155
            MANPFARIIAQLAVASAGIVSRAFVSAYSQAVHNARTGTLESAKAMSRTSKLSTLEAMQILNLQKGEMKPDLIKQRYDQYFGINDPDKGGSFYLQSKVFRAKEALDEQLALQAKQASEEAALKAKAAAGGKXXXXXAKARPA GGARRPSANRRR
Sbjct:    1 MANPFARIIAQLAVASAGIVSRAFVSAYSQAVHNARTGTLESAKAMSRTSKLSTLEAMQILNLQKGEMKPDLIKQRYDQYFGINDPDKGGSFYLQSKVFRAKEALDEQLALQAKQASEEAALKAKAAAGGKXXXXXAKARPAAGGARRPSANRRR 155          
BLAST of mRNA_E-siliculosus-1a_F_contig1135.892.1 vs. uniprot
Match: A0A835YVS4_9STRA (Mitochondrial import inner membrane translocase subunit TIM16 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVS4_9STRA)

HSP 1 Score: 141 bits (355), Expect = 5.460e-40
Identity = 76/114 (66.67%), Postives = 91/114 (79.82%), Query Frame = 0
Query:    1 MANPFARIIAQLAVASAGIVSRAFVSAYSQAVHNARTGTLESAKAMSRTSKLSTLEAMQILNLQKGEMKPDLIKQRYDQYFGINDPDKGGSFYLQSKVFRAKEALDEQLALQAK 114
            M+ P AR+IAQL V  AGIVSRAFV+AYSQAV NARTGT +  K+M+RTSK+ST EA+Q+LNL K EM P  I Q++ +YF  NDP+KGGSFYLQSKVFRA+E+L E L L AK
Sbjct:    1 MSGPLARVIAQLMVTGAGIVSRAFVAAYSQAVQNARTGTQQQVKSMTRTSKMSTAEALQVLNLSKAEMDPTRISQQFARYFESNDPNKGGSFYLQSKVFRARESLHETLELAAK 114          
BLAST of mRNA_E-siliculosus-1a_F_contig1135.892.1 vs. uniprot
Match: A0A7S3V4X6_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V4X6_9STRA)

HSP 1 Score: 103 bits (256), Expect = 3.070e-25
Identity = 55/109 (50.46%), Postives = 78/109 (71.56%), Query Frame = 0
Query:    3 NPFARIIAQLAVASAGIVSRAFVSAYSQAVHNARTGTLESAKAMSR----TSKLSTLEAMQILNLQKGEMKPDLIKQRYDQYFGINDPDKGGSFYLQSKVFRAKEALDE 107
             P AR++AQ AV   GI++RA  +AY  A++NAR G +++AKA S       K+S  EAMQ+LNL KG++ P  +++++D+YF  N  +KGGSFYLQSK++RAKE LDE
Sbjct:    4 GPIARVLAQAAVMGIGIMARAIPAAYGAALNNARKGGVDAAKANSEGIFGKKKISVDEAMQVLNLVKGDVSPKAVQKQFDRYFATNAVEKGGSFYLQSKIYRAKEQLDE 112          
BLAST of mRNA_E-siliculosus-1a_F_contig1135.892.1 vs. uniprot
Match: A0A8K1CVL5_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CVL5_PYTOL)

HSP 1 Score: 102 bits (253), Expect = 4.840e-25
Identity = 57/109 (52.29%), Postives = 76/109 (69.72%), Query Frame = 0
Query:    1 MANPFARIIAQLAVASAGIVSRAFVSAYSQAVHNARTGTLES--AKAMSRTSKLSTLEAMQILNLQ-KGEMKPDLIKQRYDQYFGINDPDKGGSFYLQSKVFRAKEALD 106
            M+ P  RIIAQ  V  AGIVSRAFV AY QAVHNA+TG   +  +KA+ R + +   +A++ILN    G    + +++++ +YF  NDP KGGSFYLQSK+FRAKEAL+
Sbjct:    1 MSGPLGRIIAQFVVMGAGIVSRAFVQAYQQAVHNAKTGNTAAMTSKAVKRKNVMERSQALEILNFPTSGTPSQEEVQKQFQRYFEANDPAKGGSFYLQSKIFRAKEALE 109          
BLAST of mRNA_E-siliculosus-1a_F_contig1135.892.1 vs. uniprot
Match: M4C0R0_HYAAE (Uncharacterized protein n=2 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4C0R0_HYAAE)

HSP 1 Score: 100 bits (249), Expect = 2.870e-24
Identity = 57/110 (51.82%), Postives = 77/110 (70.00%), Query Frame = 0
Query:    1 MANPFARIIAQLAVASAGIVSRAFVSAYSQAVHNARTGTLES--AKAMSRTSKLSTLEAMQILNLQKGEMKPDL--IKQRYDQYFGINDPDKGGSFYLQSKVFRAKEALD 106
            M+ P  RIIAQ+ V  AGIVS+AFV AY QAVHNAR+G   +  AK ++   K+S  +A++ILN     + P    I++++ +YF  NDP KGGSFYLQSK++RAKEAL+
Sbjct:    1 MSGPLGRIIAQVVVMGAGIVSKAFVQAYQQAVHNARSGNAGTVAAKTVAGKKKMSKQQALEILNFPTSGVVPSTEDIQKQFTRYFEANDPAKGGSFYLQSKIYRAKEALE 110          
BLAST of mRNA_E-siliculosus-1a_F_contig1135.892.1 vs. uniprot
Match: A0A0P1AYF2_PLAHL (Mitochondrial import inner membrane translocase subunit tim16 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AYF2_PLAHL)

HSP 1 Score: 99.8 bits (247), Expect = 3.780e-24
Identity = 57/112 (50.89%), Postives = 78/112 (69.64%), Query Frame = 0
Query:    1 MANPFARIIAQLAVASAGIVSRAFVSAYSQAVHNARTGTLES--AKAMSRTSKLSTLEAMQILNLQKGEMKPDL--IKQRYDQYFGINDPDKGGSFYLQSKVFRAKEALDEQ 108
            M+ P  RIIAQ+ V  AGIVS+AFV AY QAV NAR+G   +   KA+ R +++ST +A +ILN       P L  +++++ +YF  NDP KGGSFY+QSK++RAKEAL+ Q
Sbjct:    1 MSGPLGRIIAQVVVMGAGIVSKAFVHAYQQAVQNARSGNAAAMKTKAVVRKNQMSTQQAREILNFPVSGPAPSLEDVQRQFKRYFEANDPAKGGSFYIQSKIYRAKEALERQ 112          
BLAST of mRNA_E-siliculosus-1a_F_contig1135.892.1 vs. uniprot
Match: W7TWQ8_9STRA (Mitochondrial import inner membrane translocase subunit tim16 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TWQ8_9STRA)

HSP 1 Score: 99.4 bits (246), Expect = 8.340e-24
Identity = 56/108 (51.85%), Postives = 79/108 (73.15%), Query Frame = 0
Query:    1 MANPFARIIAQLAVASAGIVSRAFVSAYSQAVHNARTGTLESAKAMSRT-SKLSTLEAMQILNLQKGEMKPDL-IKQRYDQYFGINDPDKGGSFYLQSKVFRAKEALD 106
            M+ PF R++  +AV SA + SRAFV+AY QA+ NA+ G   +AKA SRT   ++  EA+++LNLQK ++K    I +++D+YF  N+P KGGSFYLQSKV+RAKE L+
Sbjct:    1 MSGPFVRMLVNIAVMSASVFSRAFVAAYHQALQNAKQGGGTAAKAASRTYGGMAPDEALKVLNLQKTDLKSSARIIEQFDKYFSQNEPGKGGSFYLQSKVYRAKECLE 108          
BLAST of mRNA_E-siliculosus-1a_F_contig1135.892.1 vs. uniprot
Match: A0A5D6XKL2_9STRA (EF-hand domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XKL2_9STRA)

HSP 1 Score: 105 bits (261), Expect = 1.700e-23
Identity = 61/124 (49.19%), Postives = 85/124 (68.55%), Query Frame = 0
Query:    1 MANPFARIIAQLAVASAGIVSRAFVSAYSQAVHNARTGTLESAKAMSRTSK----LSTLEAMQILNLQKG-EMKPDLIKQRYDQYFGINDPDKGGSFYLQSKVFRAKEALDEQLALQAKQASEE 119
            M+ P AR+IAQ+ V +AG+VSRAFV+AY QAVHNA++G   +A A    ++    +S  +A++ILN       KPD + +++ +YF  NDP KGGSFYLQSK+FRAKEAL+ + A     AS+E
Sbjct:  361 MSGPIARVIAQVVVMTAGVVSRAFVTAYQQAVHNAKSGNTAAAMAAKPAARAKNVMSREQALEILNFPTAAHPKPDEVAKQFTRYFEANDPAKGGSFYLQSKIFRAKEALEREQAAAGGDASQE 484          
BLAST of mRNA_E-siliculosus-1a_F_contig1135.892.1 vs. uniprot
Match: D0NVB8_PHYIT (Uncharacterized protein n=16 Tax=Phytophthora TaxID=4783 RepID=D0NVB8_PHYIT)

HSP 1 Score: 98.2 bits (243), Expect = 1.790e-23
Identity = 57/110 (51.82%), Postives = 76/110 (69.09%), Query Frame = 0
Query:    1 MANPFARIIAQLAVASAGIVSRAFVSAYSQAVHNARTGTLES--AKAMSRTSKLSTLEAMQILNLQKGEMKP--DLIKQRYDQYFGINDPDKGGSFYLQSKVFRAKEALD 106
            M+ P  RIIAQ+ V  AGIVS+AFV AY QAVHNAR+G   +  AK + R +++   +A +ILN       P  + I++++ +YF  NDP KGGSFYLQSK+FRAKEAL+
Sbjct:    1 MSGPLGRIIAQVVVMGAGIVSKAFVQAYQQAVHNARSGNAGAMAAKTVVRKNQMPKQQAREILNFPTSGPAPSSEEIQKQFTRYFEANDPAKGGSFYLQSKIFRAKEALE 110          
BLAST of mRNA_E-siliculosus-1a_F_contig1135.892.1 vs. uniprot
Match: A0A2D4C867_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C867_PYTIN)

HSP 1 Score: 97.4 bits (241), Expect = 3.040e-23
Identity = 54/110 (49.09%), Postives = 75/110 (68.18%), Query Frame = 0
Query:    1 MANPFARIIAQLAVASAGIVSRAFVSAYSQAVHNARTGT---LESAKAMSRTSKLSTLEAMQILNLQKGEMKP-DLIKQRYDQYFGINDPDKGGSFYLQSKVFRAKEALD 106
            M+ P  R+IAQ+ V  AGIVSRAFV AY QAVHNA+TG    + +  A+ R + +   +A++ILN         + +++++ +YF  NDP KGGSFYLQSK+FRAKEAL+
Sbjct:    1 MSGPLGRVIAQVIVMGAGIVSRAFVQAYQQAVHNAKTGNTAAMTAKTAIKRKNVMPRTQALEILNFPTSATPTTEXVQKQFQRYFEANDPAKGGSFYLQSKIFRAKEALE 110          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1135.892.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FSN0_ECTSI1.140e-8799.35Mitochondrial import inner membrane translocase su... [more]
A0A835YVS4_9STRA5.460e-4066.67Mitochondrial import inner membrane translocase su... [more]
A0A7S3V4X6_9STRA3.070e-2550.46Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A8K1CVL5_PYTOL4.840e-2552.29Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
M4C0R0_HYAAE2.870e-2451.82Uncharacterized protein n=2 Tax=Hyaloperonospora a... [more]
A0A0P1AYF2_PLAHL3.780e-2450.89Mitochondrial import inner membrane translocase su... [more]
W7TWQ8_9STRA8.340e-2451.85Mitochondrial import inner membrane translocase su... [more]
A0A5D6XKL2_9STRA1.700e-2349.19EF-hand domain-containing protein n=1 Tax=Pythium ... [more]
D0NVB8_PHYIT1.790e-2351.82Uncharacterized protein n=16 Tax=Phytophthora TaxI... [more]
A0A2D4C867_PYTIN3.040e-2349.09Uncharacterized protein n=1 Tax=Pythium insidiosum... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF03656Pam16coord: 7..120
e-value: 2.5E-26
score: 92.1
NoneNo IPR availablePANTHERPTHR12388:SF0MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM16coord: 6..120
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 28..155
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..7
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..27
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 20..27
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 8..19
IPR036869Chaperone J-domain superfamilyGENE3D1.10.287.110coord: 52..114
e-value: 1.9E-23
score: 83.6
IPR036869Chaperone J-domain superfamilySUPERFAMILY46565Chaperone J-domaincoord: 50..108
IPR005341Mitochondrial import inner membrane translocase subunit Tim16PANTHERPTHR12388MITOCHONDRIA ASSOCIATED GRANULOCYTE MACROPHAGE CSF SIGNALING MOLECULEcoord: 6..120

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1135contigE-siliculosus-1a_F_contig1135:2337..5557 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1135.892.1mRNA_E-siliculosus-1a_F_contig1135.892.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1135 1540..6562 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1135.892.1 ID=prot_E-siliculosus-1a_F_contig1135.892.1|Name=mRNA_E-siliculosus-1a_F_contig1135.892.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=156bp
MANPFARIIAQLAVASAGIVSRAFVSAYSQAVHNARTGTLESAKAMSRTS
KLSTLEAMQILNLQKGEMKPDLIKQRYDQYFGINDPDKGGSFYLQSKVFR
AKEALDEQLALQAKQASEEAALKAKAAAGGKGGAGGAKARPAEGGARRPS
ANRRR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005341Tim16
IPR036869J_dom_sf