prot_E-siliculosus-1a_F_contig1134.886.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1134.886.1
Unique Nameprot_E-siliculosus-1a_F_contig1134.886.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length152
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1134.886.1 vs. uniprot
Match: D7FQY4_ECTSI (Copper transport protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQY4_ECTSI)

HSP 1 Score: 297 bits (760), Expect = 7.950e-102
Identity = 147/151 (97.35%), Postives = 149/151 (98.68%), Query Frame = 0
Query:    1 MEMDDDMSSMNMSFSFTCDVGELVFGWWTVNTCWAFYLSCIPVILLSVARHWAFAVATSTATSSKKGSASRNTALLDGNGFENSSGRPPINRWTRLVWTMVSTTGAALSLLSMLVVMTYNSGLFLAVLVGEAIGFWVWGNHSLPEAMRGCH 151
            MEMDDDMSSMNMSFSFTCDVGELVFGWWTVNTCWAFYLSCIPVILLSVARHWAFA+ATSTATSSK+GSASRNTALLDGNGFENSSGRPPINRWTR VWTMVSTTGAALSLLSMLVVMTYNSGLFLAVLVGEAIGF VWGNHSLPEAMRGCH
Sbjct:    1 MEMDDDMSSMNMSFSFTCDVGELVFGWWTVNTCWAFYLSCIPVILLSVARHWAFAIATSTATSSKRGSASRNTALLDGNGFENSSGRPPINRWTRFVWTMVSTTGAALSLLSMLVVMTYNSGLFLAVLVGEAIGFGVWGNHSLPEAMRGCH 151          
BLAST of mRNA_E-siliculosus-1a_F_contig1134.886.1 vs. uniprot
Match: A0A835YT31_9STRA (Copper transport protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YT31_9STRA)

HSP 1 Score: 65.9 bits (159), Expect = 1.630e-10
Identity = 56/166 (33.73%), Postives = 82/166 (49.40%), Query Frame = 0
Query:    6 DMSSMNMSFSFTCDVG-ELVFGWWTVNTCWAFYLSCIPVILLSVARHWAFAVATSTATSSKKGSASRN-------TALLD-GNGF-------ENSSGRPPINRWTRLVWTMVSTTGAALSLLSMLVVMTYNSGLFLAVLVGEAIGFWVWGNHSLPEA----MRGCH 151
            DM  M M+FS   D   ++++ +W V T W + LSC+ ++ L V  H+  +V          G A++        +AL+D G+G           +G PP  R  RL      T G AL+LL MLV MT+NSGLF+A+L G A G W+  +  +  A    +  CH
Sbjct:   11 DMGGMAMTFSSLTDYKVKILWDFWNVTTRWQYALSCLTIVALCVLYHYIRSVEMRYTQELVAGRAAQVQAQQQDLSALMDEGSGVLAAPLLRAAKAGAPPRLRRLRLRLVAAGTAGYALALLLMLVAMTFNSGLFVALLAGWAAGQWLCFDAGVAAAGAARVEHCH 176          
BLAST of mRNA_E-siliculosus-1a_F_contig1134.886.1 vs. uniprot
Match: A0A8J5QNJ0_9ASCO (Copper transport protein n=1 Tax=[Candida] subhashii TaxID=561895 RepID=A0A8J5QNJ0_9ASCO)

HSP 1 Score: 60.8 bits (146), Expect = 7.770e-9
Identity = 53/157 (33.76%), Postives = 73/157 (46.50%), Query Frame = 0
Query:    3 MDDDMSSMNMSFSFTCDVGELVFGWWTVNTCWAFYLSCIPVILLSVARHWAFAVATST----ATSSKKGSASRNTALLDG--NGFENSSGRPPINRWTRLVWTMVSTTGAALSLLSMLVVMTYNSGLFLAVLVGEAIGFWVWGNHSLPEAMR--GCH 151
            MDDDM SMNM F++      +VF WW + T + F LS   V+LL +   +  A   +     A++  +    R   L  G   GF+              VW          S + MLV MTYN  L +AV VG AIG ++WG+ S  E++R   CH
Sbjct:   16 MDDDMCSMNMIFTWDWKNTCVVFRWWHIKTYFGFVLSMFAVVLLGMGYEYVRAFFANWEREHASTVVQPGQDRRFKLRRGILYGFQ--------------VWY---------SFMLMLVFMTYNGWLMIAVAVGAAIGNYIWGSSSQQESVRIMACH 149          
BLAST of mRNA_E-siliculosus-1a_F_contig1134.886.1 vs. uniprot
Match: A0A068RK52_9FUNG (Copper transport protein n=1 Tax=Lichtheimia corymbifera JMRC:FSU:9682 TaxID=1263082 RepID=A0A068RK52_9FUNG)

HSP 1 Score: 60.5 bits (145), Expect = 1.620e-8
Identity = 55/169 (32.54%), Postives = 85/169 (50.30%), Query Frame = 0
Query:    1 MEMDDDMSSMNMSFSFTCDVGELVFGWWTVNTCWAFYLSCIPVILLSVARHWAFAVATSTA-------TSSKK---------GSASRNTALLDGNGFENSSGRPPINRWTRLVWTMVSTTGAALSLLSMLVVMTYNSGLFLAVLVGEAIGFWVWGNHSLPEAMRG--CH 151
            M MDDDM SMNM F++      +VF WW +    +  +SC+ V   ++A  + +  A S+A        ++KK          +A+ +T LL  +G    SG P ++R   +  +++     A+S   MLV MTYN  L LAV++G  +G + +GN  L  A R   CH
Sbjct:   10 MPMDDDMCSMNMIFNWQIKDVCVVFEWWHIRGIPSLLISCLAVF--AIAACFEYVRARSSALEQTWLNVNAKKRQDDEEITTNNANESTTLLQPSG----SGNPRLSRHQHMALSVIYAFLVAISFWLMLVFMTYNGFLMLAVVLGAGVGHYFFGNGYLT-ANRSIQCH 171          
BLAST of mRNA_E-siliculosus-1a_F_contig1134.886.1 vs. uniprot
Match: Q6FQY3_CANGA (Copper transport protein n=2 Tax=Candida glabrata TaxID=5478 RepID=Q6FQY3_CANGA)

HSP 1 Score: 57.8 bits (138), Expect = 1.780e-7
Identity = 53/160 (33.12%), Postives = 72/160 (45.00%), Query Frame = 0
Query:    4 DDDMSSMNMSFSFTCDVGELVFGWWTVNTCWAFYLSCIPVILLS---------VARHWAFAVATSTATSSKKGSASRNTALLDGNGFENSSGRPPINRW--TRLVWTMVSTTGAALSLLSMLVVMTYNSGLFLAVLVGEAIGFWVWGNHSLPEA-MRGCH 151
            DDDM +M+M F++      +VF WW + T     LSCI + L++         + R    + A  T+TS+  GS +              S  P   R+  +R +W  V       S L MLV MTYN  L LAV+VG   G + WG    PEA    CH
Sbjct:   33 DDDMCAMSMVFTWNYKNTCVVFNWWKIKTLHGLLLSCIAIALITGFYEYLKFYLYRKNRDSEAVVTSTSATNGSLN--------------SPSPLTKRYAVSRSLWYGVQ---VGYSFLLMLVFMTYNGWLMLAVVVGAIWGHYHWGIRCTPEAGTLACH 175          
BLAST of mRNA_E-siliculosus-1a_F_contig1134.886.1 vs. uniprot
Match: A0A1D1YNN7_9ARAE (Copper transport protein n=1 Tax=Anthurium amnicola TaxID=1678845 RepID=A0A1D1YNN7_9ARAE)

HSP 1 Score: 56.6 bits (135), Expect = 5.240e-7
Identity = 43/153 (28.10%), Postives = 73/153 (47.71%), Query Frame = 0
Query:    9 SMNMSFSFTCDVGELVFGWWTVNTCWAFYLSCIPVILLS--------VARHWAFAVATSTATSSKKGSASRNTALLDGNGFENSSGRPPINRWTRLVWTMVSTTGAALSLLSMLVVMTYNSGLFLAVLVGEAIGFWVWGNHSLPEAMRG--CH 151
            SMNM F++  +   ++F WW+VN+     LSC+ VI L+        V R +   + TS+ +  ++G  +    +   N          I     LV T + T    LS   ML+ MTYN  L ++V++G A+G++V+   ++    +   CH
Sbjct:   35 SMNMLFNWDTERLCIIFSWWSVNSIGFLILSCLVVIFLAASFEFLKLVLRKYDSKIYTSSHSQLQEGRDTNPEEVASQNNVIR------ITYTQHLVRTFIHTAQVFLSFFLMLIFMTYNGFLMISVIIGAAVGYFVFAKQTIESGGKSLACH 181          
BLAST of mRNA_E-siliculosus-1a_F_contig1134.886.1 vs. uniprot
Match: A0A8H2ZHV1_9SACH (Copper transport protein n=1 Tax=Kazachstania barnettii TaxID=61262 RepID=A0A8H2ZHV1_9SACH)

HSP 1 Score: 55.8 bits (133), Expect = 7.840e-7
Identity = 45/147 (30.61%), Postives = 74/147 (50.34%), Query Frame = 0
Query:    9 SMNMSFSFTCDVGELVFGWWTVNTCWAFYLSCIPVILLSVARHWAFAVATSTATSSKKGSASRNTALLDGNGFENSSGRPPINRWTRLVWTMVSTTGAALSLLSMLVVMTYNSGLFLAVLVGEAIGFWVWGNH--SLPEAMRG--CH 151
            SMNM F+++     +VF WW + T   F +SC+  I++ +A ++ +        +S+  +++R +   +G+G    + R    R      T+        S + MLV MTYN  L LAV+VG A+G++ W +   SLP   R   CH
Sbjct:   26 SMNMLFTWSYKDTCVVFNWWHIRTRLQFIISCL--IVVGLATYYEYLKFRFVKYASETTASNRVSTTTNGSGVSQIARREKFYR------TIHYGIQVGFSFMLMLVFMTYNGWLMLAVVVGAALGYYRWNDSLVSLPMEQRSLACH 164          
BLAST of mRNA_E-siliculosus-1a_F_contig1134.886.1 vs. uniprot
Match: A0A1X7R593_9SACH (Copper transport protein n=1 Tax=Kazachstania saulgeensis TaxID=1789683 RepID=A0A1X7R593_9SACH)

HSP 1 Score: 55.1 bits (131), Expect = 1.520e-6
Identity = 44/147 (29.93%), Postives = 72/147 (48.98%), Query Frame = 0
Query:    9 SMNMSFSFTCDVGELVFGWWTVNTCWAFYLSCIPVILLSVARHWAFAVATSTATSSKKGSASRNTALLDGNGFENSSGRPPINRWTRLVWTMVSTTGAALSLLSMLVVMTYNSGLFLAVLVGEAIGFWVWGNH--SLPEAMRG--CH 151
            SMNMSF+++     +VF WW + T + F +SC+  I+ S+A ++ +        +S+   ++R +   + N          I R  +L  T         S + ML+ MTYN  L LAV++G A G++ W +   +LP   R   CH
Sbjct:   26 SMNMSFTWSYKDTCVVFNWWHIKTKFQFVISCL--IVASLATYYEYLRFKFVKYASETTGSNRVSITTNNNSISQ------IARREKLCRTFHYGIQVGFSFMLMLIFMTYNGWLMLAVVIGAAFGYYRWNDSLVALPMEQRSLACH 164          
BLAST of mRNA_E-siliculosus-1a_F_contig1134.886.1 vs. uniprot
Match: A0A015L4R1_RHIIW (Copper transport protein n=8 Tax=Rhizophagus TaxID=1129544 RepID=A0A015L4R1_RHIIW)

HSP 1 Score: 52.8 bits (125), Expect = 1.200e-5
Identity = 47/153 (30.72%), Postives = 78/153 (50.98%), Query Frame = 0
Query:    4 DDDMSSMNMSFSFTCDVGELVFGWWTVNTCWAFYLSCIPVILLSVARHWAFAVATSTATSSKKGSASRNTALLDGNGFENSSGRPPINRWT---RLVWTMVSTTGAALSLLSMLVVMTYNSGLFLAVLVGEAIGFWVWGNHSLPEAMRG--CH 151
            D D  +M M F++  +   ++F WW VN+     LSC  +ILL+ +  +    A     +  + S S+     D N  E ++ +   NR T   +LV T++ T+   LS   MLV MTYN  L ++V++G AIG++V+ +  +    +   CH
Sbjct:   20 DSDACNMQMLFNWDTEKLCIIFTWWRVNSIGFLILSCFIIILLATSFEF-LRFALRKYDTKIQVSYSQLQEGRDANSEEVAT-QSNANRITYVQQLVRTLIHTSQVFLSFFLMLVFMTYNGFLMISVIIGAAIGYFVFSSSVIDFGGKSITCH 170          
BLAST of mRNA_E-siliculosus-1a_F_contig1134.886.1 vs. uniprot
Match: G3ATD1_SPAPN (Copper transport protein n=1 Tax=Spathaspora passalidarum (strain NRRL Y-27907 / 11-Y1) TaxID=619300 RepID=G3ATD1_SPAPN)

HSP 1 Score: 52.4 bits (124), Expect = 1.420e-5
Identity = 50/160 (31.25%), Postives = 69/160 (43.12%), Query Frame = 0
Query:    5 DDMSSMNMSFSFTCDVGELVFGWWTVNTCWAFYLSCIPVILLSVARH--------WAFAVATSTATSSKKGSAS-RNTALLDG--NGFENSSGRPPINRWTRLVWTMVSTTGAALSLLSMLVVMTYNSGLFLAVLVGEAIGFWVWGNHSLPEAMRG--CH 151
            DDM SMNM F++      +VF WW + T + F  +   ++LL +           W  A     AT + + S S RN  L  G   GF+              VW          S + MLV MTYN  L +AV VG  IG ++WG  +   ++R   CH
Sbjct:   23 DDMCSMNMIFTWDWKNTCVVFNWWHIKTYYGFIFTLFAIVLLGMGYEFVRAWFSCWEKAYFARLATPTNQTSQSLRNFRLSRGVLYGFQ--------------VWY---------SFMLMLVFMTYNGWLMIAVAVGAGIGNYLWGTTTESGSVRAMSCH 159          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1134.886.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 12
Match NameE-valueIdentityDescription
D7FQY4_ECTSI7.950e-10297.35Copper transport protein n=2 Tax=Ectocarpus TaxID=... [more]
A0A835YT31_9STRA1.630e-1033.73Copper transport protein n=1 Tax=Tribonema minus T... [more]
A0A8J5QNJ0_9ASCO7.770e-933.76Copper transport protein n=1 Tax=[Candida] subhash... [more]
A0A068RK52_9FUNG1.620e-832.54Copper transport protein n=1 Tax=Lichtheimia corym... [more]
Q6FQY3_CANGA1.780e-733.13Copper transport protein n=2 Tax=Candida glabrata ... [more]
A0A1D1YNN7_9ARAE5.240e-728.10Copper transport protein n=1 Tax=Anthurium amnicol... [more]
A0A8H2ZHV1_9SACH7.840e-730.61Copper transport protein n=1 Tax=Kazachstania barn... [more]
A0A1X7R593_9SACH1.520e-629.93Copper transport protein n=1 Tax=Kazachstania saul... [more]
A0A015L4R1_RHIIW1.200e-530.72Copper transport protein n=8 Tax=Rhizophagus TaxID... [more]
G3ATD1_SPAPN1.420e-531.25Copper transport protein n=1 Tax=Spathaspora passa... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007274Ctr copper transporterPFAMPF04145Ctrcoord: 12..138
e-value: 1.2E-13
score: 51.9
IPR007274Ctr copper transporterPANTHERPTHR12483SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERScoord: 2..148
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..30
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 96..116
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 58..95
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 36..57
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 140..151
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 31..35
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..11
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 122..139
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 117..121
NoneNo IPR availableTMHMMTMhelixcoord: 122..139
NoneNo IPR availableTMHMMTMhelixcoord: 96..118
NoneNo IPR availableTMHMMTMhelixcoord: 24..46

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1134contigE-siliculosus-1a_F_contig1134:11385..16256 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1134.886.1mRNA_E-siliculosus-1a_F_contig1134.886.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1134 11317..17342 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1134.886.1 ID=prot_E-siliculosus-1a_F_contig1134.886.1|Name=mRNA_E-siliculosus-1a_F_contig1134.886.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=152bp
MEMDDDMSSMNMSFSFTCDVGELVFGWWTVNTCWAFYLSCIPVILLSVAR
HWAFAVATSTATSSKKGSASRNTALLDGNGFENSSGRPPINRWTRLVWTM
VSTTGAALSLLSMLVVMTYNSGLFLAVLVGEAIGFWVWGNHSLPEAMRGC
H*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007274Cop_transporter