prot_E-siliculosus-1a_F_contig11302.866.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig11302.866.1
Unique Nameprot_E-siliculosus-1a_F_contig11302.866.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length38
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig11302.866.1 vs. uniprot
Match: D7G557_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G557_ECTSI)

HSP 1 Score: 52.8 bits (125), Expect = 6.560e-7
Identity = 20/29 (68.97%), Postives = 23/29 (79.31%), Query Frame = 0 
Query:   10 AHAGGCGTRPIWGYWADGKGTVCAKHKGD 38
            +H  GC +RP WGYWADGK +VC KHKGD
Sbjct:  158 SHGEGCTSRPGWGYWADGKASVCGKHKGD 186
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig11302.866.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G557_ECTSI6.560e-768.97EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig11302contigE-siliculosus-1a_F_contig11302:88..201 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig11302.866.1mRNA_E-siliculosus-1a_F_contig11302.866.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig11302 88..392 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig11302.866.1 ID=prot_E-siliculosus-1a_F_contig11302.866.1|Name=mRNA_E-siliculosus-1a_F_contig11302.866.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=38bp
MVDVHSKRCAHAGGCGTRPIWGYWADGKGTVCAKHKGD
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