prot_E-siliculosus-1a_F_contig1130.863.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1130.863.1
Unique Nameprot_E-siliculosus-1a_F_contig1130.863.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length309
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1130.863.1 vs. uniprot
Match: D7FNT4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FNT4_ECTSI)

HSP 1 Score: 442 bits (1137), Expect = 2.210e-154
Identity = 228/231 (98.70%), Postives = 229/231 (99.13%), Query Frame = 0
Query:   78 ASDEVEQRSPVAGSLLRALTGPYVSLGVGVGILLAVLANRIATPELVDSQARTDILGVIASGGLVTNGVYLLDLKVKEAEEVTLVGTFVQEYADDLAPGARRDLQWLGESLLLVSPAKSMLVYQDGKTLARVGVMGESADIRDAPILRKCIGEGRDGREQYLAALQTLPGKVEFDYLPENCQAVLMLPVLEGSAVVVVGTNRARAFTPKDIVWMKGLCNQAALSLREAVVA 308
            ASDEVEQRSPVAGSL+RALTGPYVSLGVGVGILLAVLANRIATPELVDSQARTDILGVIASGGLVTNGVYLLDLKVKEAEEVTLVGTFVQEYADDLAPGARRDLQWLGESLLLVSPA SMLVYQDGKTLARVGVMGESADIRDAPILRKCI EGRDGREQYLAALQTLPGKVEFDYLPENCQAVLMLPVLEGSAVVVVGTNRARAFTPKDIVWMKGLCNQAALSLREAVVA
Sbjct:   62 ASDEVEQRSPVAGSLIRALTGPYVSLGVGVGILLAVLANRIATPELVDSQARTDILGVIASGGLVTNGVYLLDLKVKEAEEVTLVGTFVQEYADDLAPGARRDLQWLGESLLLVSPATSMLVYQDGKTLARVGVMGESADIRDAPILRKCISEGRDGREQYLAALQTLPGKVEFDYLPENCQAVLMLPVLEGSAVVVVGTNRARAFTPKDIVWMKGLCNQAALSLREAVVA 292          
BLAST of mRNA_E-siliculosus-1a_F_contig1130.863.1 vs. uniprot
Match: A0A835YLX2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLX2_9STRA)

HSP 1 Score: 207 bits (526), Expect = 1.200e-61
Identity = 118/219 (53.88%), Postives = 145/219 (66.21%), Query Frame = 0
Query:   89 AGSLLRALTGPYVSLGVGVGILLAVLANRIA-TPELVDSQARTDILGVIASGGLVTNGVYLLDLKVKEAEEVTLVGTFVQEYADDLAPGARRDLQWLGESLLLVSPAK-SMLVYQDGKTLARVGVMGESADIRDA--PILRKCIGEG-RDGREQYLAALQTLPGKVEFDYLPENCQAVLMLPVLEGSAVVVVGTNRARAFTPKDIVWMKGLCNQAALSL 302
            +G ++R LTG   SL  G+  L A+L NR+A TP L DSQARTDIL +IASGGL+ NGVYLLDL +K A+ VTLVGTF QE    L+      L+WL ESL+L  PA  S+LV+ DG+T AR GVMG  A   DA  PI+ K + E  R  +E YL  LQ LPGK+EF YLP NCQ V++  VL G   VVVG ++ARA+TP+DI WMK    +A   L
Sbjct:   84 SGGIIRQLTGSNFSLAAGLLGLAAILINRLALTPYLYDSQARTDILALIASGGLIMNGVYLLDLDIKVADSVTLVGTFEQELDPTLSAEQAAQLRWLCESLILAKPATASVLVHVDGRTRARYGVMGGGATTVDAGAPIMAKALREAARSDKEVYLPVLQNLPGKIEFTYLPANCQGVVIQGVLGGRGAVVVGASQARAYTPRDIAWMKAASERATALL 302          
BLAST of mRNA_E-siliculosus-1a_F_contig1130.863.1 vs. uniprot
Match: R1DVS8_EMIHU (Uncharacterized protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1DVS8_EMIHU)

HSP 1 Score: 145 bits (365), Expect = 3.900e-38
Identity = 91/243 (37.45%), Postives = 136/243 (55.97%), Query Frame = 0
Query:   70 PPPPCNFQASDEVEQR--SPVAGSLLRALTGPYVSLGVGVGILLAVLANRIATPELVDSQARTDILGVIASGGLVTNGVYLLDLKVKEAEEVTLVGTFVQEYADDLAPG-ARRDLQWLGESLLLVSPAKSMLVYQ-DGKTLARVGVM------GESADIRDAPILRKCIGEGRDGREQYLAALQTLPGKVEFDYLPENCQAVLMLPVLEGSAVVVVGTNRARAFTPKDIVWMKGLCNQAALSL 302
            PPPP        +  R  SP A  LLR L  P VSL  G  +LLA++ NR+AT EL++SQ+R D++  +    L+ +G+  L +   E E V+L G    ++ D +  G ARR+L W  ++L     A S+ +++  G TLA  G++        +A +   P+L+KC G    G  +YL ALQ LPG+VEF Y PE  QA+LM+P+   S VVV+G +R RAF  +D+ W + +  +   +L
Sbjct:   14 PPPPIARPCGVALTPRCGSPHASGLLRRLRSPEVSLVAGGSLLLALVVNRLATEELLNSQSRADLIATVGPVLLMLDGLSNLAITPAEPEPVSLAGGVAVDWLDPVVSGDARRELAWATDALGAGLGASSVAIWRAGGGTLAACGLLTPRAAASPAAAVVPGPLLQKCAGSAT-GAPEYLPALQLLPGRVEFSYFPEATQALLMVPLGGRSGVVVLGADRKRAFGAEDVAWARAIAGRLGAAL 255          
BLAST of mRNA_E-siliculosus-1a_F_contig1130.863.1 vs. uniprot
Match: UPI0019F7C38E (Cofactor assembly of complex C subunit B n=1 Tax=Pleurocapsales cyanobacterium LEGE 10410 TaxID=1828828 RepID=UPI0019F7C38E)

HSP 1 Score: 141 bits (355), Expect = 3.320e-37
Identity = 79/211 (37.44%), Postives = 127/211 (60.19%), Query Frame = 0
Query:   92 LLRALTGPYVSLGVGVGILLAVLANRIATPELVDSQARTDILGVIASGGLVTNGVYLLDLKVKEAEEVTLVGTFVQEYADDLAPGARRDLQWLGESLLLVSPAKSMLVYQDGKTLARVGVMGESADIRDAPILRKCIGEGRDGREQYLAALQTLPGKVEFDYLPENCQAVLMLPVLEGSAVVVVGTNRARAFTPKDIVWMKGLCNQAALSL 302
            +LR L  P+ + G+G G LL  L NR+ T ++ DSQAR+D LGVI    L+  G+    ++ K  + VTL+G    E+A +L+  A+ +L W    LL  +  +S++VY DG T+ R GV+G+++ ++   IL + + + +     YL  L   PGKVEFDYLPEN Q V+  P+     V+++G N  R++T KD  W++G+ ++ A++L
Sbjct:    9 ILRLL--PFFAGGLG-GFLL--LINRLLTAQITDSQARSDALGVIEGAVLILVGLLWQQIQAKTPDTVTLIGETGLEFASELSEVAKTELAWASHLLLTNTVTRSLVVYYDGITMLRRGVLGKNSQVKPGAILERALSKAKP---VYLVNLNLYPGKVEFDYLPENTQGVICQPI-GNKGVLILGANAPRSYTKKDEQWIEGIADKLAVTL 210          
BLAST of mRNA_E-siliculosus-1a_F_contig1130.863.1 vs. uniprot
Match: L8LI26_9CHRO (Uncharacterized protein n=1 Tax=Gloeocapsa sp. PCC 73106 TaxID=102232 RepID=L8LI26_9CHRO)

HSP 1 Score: 140 bits (354), Expect = 4.290e-37
Identity = 76/213 (35.68%), Postives = 128/213 (60.09%), Query Frame = 0
Query:   92 LLRALTGPYVSLGVGVGILLAVLANRIATPELVDSQARTDILGVIASGGLVTNGVYLLDLKVKEAEEVTLVGTFVQEYADDLAPGARRDLQWLGESLLLVSPAKSMLVYQDGKTLARVGVMGESADIRDAPILRKCIGEGRDGREQYLAALQTLPGKVEFDYLPENCQAVLMLPVLEGSAVVVVGTNRARAFTPKDIVWMKGLCNQAALSLRE 304
            +LR L  P VS G+G  +LL    NR++T EL +SQAR+D+LGVI S  L+  G+    ++ +  E VTL+G    E    L    + +L W    LL  +  +S+++Y +G+ L R G++G++A ++  PI+ +C+   +  +  YL +L+  PG +EFDYLPEN Q V+  P L    V+++G N  R++T +D  W++G+ ++ A++L +
Sbjct:    9 ILRLL--PLVSGGLGGALLLF---NRLSTLELTNSQARSDVLGVILSALLILVGLLWQQIQSRNPESVTLIGEEGFELDPQLPDSVKTELAWASHLLLTNTVTRSVVIYYEGRVLLRRGILGKTAQVKPGPIIHRCL---KTSKPVYLVSLKLYPGGIEFDYLPENTQGVICQP-LGKEGVMILGANAPRSYTKQDETWIEGIADKLAITLAQ 212          
BLAST of mRNA_E-siliculosus-1a_F_contig1130.863.1 vs. uniprot
Match: A0A8J6RIB7_9CYAN (Cofactor assembly of complex C subunit B n=2 Tax=Cyanobacteria/Melainabacteria group TaxID=1798711 RepID=A0A8J6RIB7_9CYAN)

HSP 1 Score: 140 bits (353), Expect = 9.140e-37
Identity = 80/206 (38.83%), Postives = 121/206 (58.74%), Query Frame = 0
Query:   99 PYVSLGVGVGILLAVLANRIATPELVDSQARTDILGVIASGGLVTNGVYLLDLKVKEAEEVTLVGTFVQEYADDLAPGARRDLQWLGESLLLVSPAKSMLVYQDGKTLARVGVMGESADIRDAPILRKCIGEGRDGREQYLAALQTLPGKVEFDYLPENCQAVLMLPVLEGSAVVVVGTNRARAFTPKDIVWMKGLCNQAALSLRE 304
            P V+ G+G G LL  L NR+ TP L +SQAR+D++GVI S  L+  G+    ++    E VTL+G    E  D L   A+ +L W    LL  +  +S++VY+ GKTL R G++   A++   PILR+ +     G+  YL  L   PG+VEFDYLPEN Q V+  P+ +G A+++   N  R++T +D  W++G+ ++   SL E
Sbjct:   14 PLVTGGLG-GTLL--LINRVLTPALTESQARSDVMGVILSALLILTGLLWQRVQPTLPEAVTLIGAEGLELDDALPDAAKTELAWASHLLLTNTVTRSVVVYRQGKTLLRRGILAPKAEVTPGPILRRVL---ETGKAVYLVKLSIYPGRVEFDYLPENTQGVICQPMGQGGALILAA-NAPRSYTRQDEAWIEGIADKLGHSLGE 212          
BLAST of mRNA_E-siliculosus-1a_F_contig1130.863.1 vs. uniprot
Match: A0A1Z4RSL5_9CHRO (Uncharacterized protein n=1 Tax=Chondrocystis sp. NIES-4102 TaxID=2005460 RepID=A0A1Z4RSL5_9CHRO)

HSP 1 Score: 138 bits (348), Expect = 3.820e-36
Identity = 80/213 (37.56%), Postives = 130/213 (61.03%), Query Frame = 0
Query:   92 LLRALTGPYVSLGVGVGILLAVLANRIATPELVDSQARTDILGVIASGGLVTNGVYLLDLKVKEAEEVTLVGTFVQEYADDLAPGARRDLQWLGESLLLVSPAKSMLVYQDGKTLARVGVMGESADIRDAPILRKCIGEGRDGREQYLAALQTLPGKVEFDYLPENCQAVLMLPVLEGS-AVVVVGTNRARAFTPKDIVWMKGLCNQAALSLR 303
            +LR L  P+ + GV  G+LL  L NR+ T +L DSQAR+D LGVI    L+  G+    ++ K  + VTL+G    E   +L   A+ +L W    L+  +  +S++VY  GKT+ R GV+G+++ ++   I+++ + +G+     YL  L   PGKVEFDYLPEN Q V+  P+  GS  V+++G N  R++T +D VW++G+ ++ A++L+
Sbjct:    9 ILRLL--PFFAGGVS-GLLL--LVNRLLTTQLTDSQARSDALGVIEGAVLILVGLLWQQIQAKPPDTVTLIGETGLELDSELPQTAKLELAWASHLLITNTVTRSLVVYYAGKTILRRGVLGKNSQVKPGAIVQRVLTQGKP---VYLVNLNLYPGKVEFDYLPENTQGVICQPI--GSLGVLILGANAPRSYTKQDEVWIEGIADKLAVTLK 211          
BLAST of mRNA_E-siliculosus-1a_F_contig1130.863.1 vs. uniprot
Match: UPI0016848F88 (cofactor assembly of complex C subunit B n=1 Tax=Richelia sinica TaxID=1357545 RepID=UPI0016848F88)

HSP 1 Score: 137 bits (346), Expect = 7.160e-36
Identity = 79/218 (36.24%), Postives = 123/218 (56.42%), Query Frame = 0
Query:   85 RSPVAGSLLRALTGPYVSLGVGVGILLAVLANRIATPELVDSQARTDILGVIASGGLVTNGVYLLDLKVKEAEEVTLVGTFVQEYADDLAPGARRDLQWLGESLLLVSPAKSMLVYQDGKTLARVGVMGESADIRDAPILRKCIGEGRDGREQYLAALQTLPGKVEFDYLPENCQAVLMLPVLEGSAVVVVGTNRARAFTPKDIVWMKGLCNQAALSL 302
            + P    +LR L  P    G+G  +LL    NR+ TPEL DSQAR D+LGVI S  L+  G+    ++ +  E V L+G      A++L    + +L W    LL  +  +S++VY  GK L R G++G  ++I   PI+++ +   +     YL ALQ  PGK+EFDYLPEN Q V+  P+ E   V+++G N  R++T +D  W+  + ++ A++L
Sbjct:    2 KKPDPNGVLRLL--PLAVGGLGATLLLV---NRLLTPELTDSQARGDVLGVILSAVLILTGLIWQQVQPRSPEVVELMGEEGFFLAENLPEAVKTELAWASHILLTNTVTRSLVVYYQGKVLLRRGILGSKSEITPGPIVQRVLATKKP---VYLVALQIYPGKIEFDYLPENTQGVICQPIGE-QGVIILGANAPRSYTKQDENWISAISDKLAVTL 210          
BLAST of mRNA_E-siliculosus-1a_F_contig1130.863.1 vs. uniprot
Match: A0A2T1CRW1_9CYAN (Cofactor assembly of complex C subunit B n=1 Tax=Pleurocapsa sp. CCALA 161 TaxID=2107688 RepID=A0A2T1CRW1_9CYAN)

HSP 1 Score: 137 bits (345), Expect = 9.800e-36
Identity = 80/214 (37.38%), Postives = 125/214 (58.41%), Query Frame = 0
Query:   89 AGSLLRALTGPYVSLGVGVGILLAVLANRIATPELVDSQARTDILGVIASGGLVTNGVYLLDLKVKEAEEVTLVGTFVQEYADDLAPGARRDLQWLGESLLLVSPAKSMLVYQDGKTLARVGVMGESADIRDAPILRKCIGEGRDGREQYLAALQTLPGKVEFDYLPENCQAVLMLPVLEGSAVVVVGTNRARAFTPKDIVWMKGLCNQAALSL 302
            A  +LR L  P+ + G+G G LL  L NR+ T ++ DSQAR+D LGVI    L+  G+    ++ +  + V L+G    E  + L+  A+ +L W    LL  +  +S+LVY DGKT+ R GV G+++ ++   IL + I +G+     YL  L   PGK+EFDYLPEN Q V+  P+    A+++ G N  R++T KD  W+ G+ ++ A++L
Sbjct:    6 ANRILRLL--PFFAGGLG-GFLL--LINRLLTAQITDSQARSDALGVIEGAVLILVGLLWQQIQGRTPDTVDLIGETGLELDESLSESAQTELAWASHLLLTNTVTRSLLVYYDGKTILRRGVFGKNSQVKPGAILERAIAKGKP---VYLVNLSLYPGKLEFDYLPENTQGVICQPIGTQGALIL-GANAPRSYTKKDEQWIAGIADKLAVTL 210          
BLAST of mRNA_E-siliculosus-1a_F_contig1130.863.1 vs. uniprot
Match: UPI00034BD926 (cofactor assembly of complex C subunit B n=1 Tax=Pleurocapsa sp. PCC 7319 TaxID=118161 RepID=UPI00034BD926)

HSP 1 Score: 137 bits (345), Expect = 1.040e-35
Identity = 78/214 (36.45%), Postives = 131/214 (61.21%), Query Frame = 0
Query:   89 AGSLLRALTGPYVSLGVGVGILLAVLANRIATPELVDSQARTDILGVIASGGLVTNGVYLLDLKVKEAEEVTLVGTFVQEYADDLAPGARRDLQWLGESLLLVSPAKSMLVYQDGKTLARVGVMGESADIRDAPILRKCIGEGRDGREQYLAALQTLPGKVEFDYLPENCQAVLMLPVLEGSAVVVVGTNRARAFTPKDIVWMKGLCNQAALSL 302
            A  +LR L  P  + G+G G+LL  L NR+ T +L DSQAR+D LG+I    L+  G+    ++ +  + VTLVG    E+A +L+  A+ +L W  + LL  +  +S++VY D +T+ R GV+GE++ ++   I+++ I + +     YL  L   PGKVEFDYLPEN Q ++  P+ +   V+++G N  R++T +D  W++G+ ++ A++L
Sbjct:    6 ANYILRLL--PIFAGGLG-GLLL--LINRLLTIQLTDSQARSDALGIIEGAVLILVGLLWQQIQARTPDTVTLVGETGLEFAPELSEVAKTELAWASQLLLTNTVTRSLVVYYDDQTILRRGVLGENSQVKPGAIVQRVISKNKP---VYLVNLNLYPGKVEFDYLPENTQGLICQPIGD-RGVLILGANAPRSYTKQDEKWIEGIADKLAVTL 210          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1130.863.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FNT4_ECTSI2.210e-15498.70Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YLX2_9STRA1.200e-6153.88Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
R1DVS8_EMIHU3.900e-3837.45Uncharacterized protein n=1 Tax=Emiliania huxleyi ... [more]
UPI0019F7C38E3.320e-3737.44Cofactor assembly of complex C subunit B n=1 Tax=P... [more]
L8LI26_9CHRO4.290e-3735.68Uncharacterized protein n=1 Tax=Gloeocapsa sp. PCC... [more]
A0A8J6RIB7_9CYAN9.140e-3738.83Cofactor assembly of complex C subunit B n=2 Tax=C... [more]
A0A1Z4RSL5_9CHRO3.820e-3637.56Uncharacterized protein n=1 Tax=Chondrocystis sp. ... [more]
UPI0016848F887.160e-3636.24cofactor assembly of complex C subunit B n=1 Tax=R... [more]
A0A2T1CRW1_9CYAN9.800e-3637.38Cofactor assembly of complex C subunit B n=1 Tax=P... [more]
UPI00034BD9261.040e-3536.45cofactor assembly of complex C subunit B n=1 Tax=P... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021325Cofactor assembly of complex C subunit B, CCB2/CCB4PFAMPF11152CCB2_CCB4coord: 102..297
e-value: 3.5E-52
score: 176.6
NoneNo IPR availablePANTHERPTHR34943:SF1coord: 103..306
NoneNo IPR availablePANTHERPTHR34943FAMILY NOT NAMEDcoord: 103..306
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..23
score: 0.496

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1130contigE-siliculosus-1a_F_contig1130:14459..17026 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1130.863.1mRNA_E-siliculosus-1a_F_contig1130.863.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1130 12114..17782 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1130.863.1 ID=prot_E-siliculosus-1a_F_contig1130.863.1|Name=mRNA_E-siliculosus-1a_F_contig1130.863.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=309bp
MFPTTALWKLLPGLLLAPYPGEQKMVCSASVLQLHSLNARVFSNGWLPCV
SPTMPMDNFRSTVNLSLSLPPPPCNFQASDEVEQRSPVAGSLLRALTGPY
VSLGVGVGILLAVLANRIATPELVDSQARTDILGVIASGGLVTNGVYLLD
LKVKEAEEVTLVGTFVQEYADDLAPGARRDLQWLGESLLLVSPAKSMLVY
QDGKTLARVGVMGESADIRDAPILRKCIGEGRDGREQYLAALQTLPGKVE
FDYLPENCQAVLMLPVLEGSAVVVVGTNRARAFTPKDIVWMKGLCNQAAL
SLREAVVA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR021325CCB2/CCB4