prot_E-siliculosus-1a_F_contig11273.847.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig11273.847.1
Unique Nameprot_E-siliculosus-1a_F_contig11273.847.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length120
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig11273.847.1 vs. uniprot
Match: D7FNW9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNW9_ECTSI)

HSP 1 Score: 93.2 bits (230), Expect = 3.500e-21
Identity = 51/52 (98.08%), Postives = 51/52 (98.08%), Query Frame = 0 
Query:   68 RRAGGVEGQSKKRPARRKRSEKPRENSEVGVRVSKRGRVIKKNVTLQDQGYS 119
            RRAGGVEGQSKKRPARRKRSE PRENSEVGVRVSKRGRVIKKNVTLQDQGYS
Sbjct:  156 RRAGGVEGQSKKRPARRKRSEIPRENSEVGVRVSKRGRVIKKNVTLQDQGYS 207
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BLAST of mRNA_E-siliculosus-1a_F_contig11273.847.1 vs. uniprot
Match: A0A6H5K6M3_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6M3_9PHAE)

HSP 1 Score: 65.9 bits (159), Expect = 4.400e-10
Identity = 36/47 (76.60%), Postives = 40/47 (85.11%), Query Frame = 0 
Query:   72 GVEGQSKKRPARRKRSEKPRENSEVGVRVSKRGRVIKKNVTLQDQGY 118
            GVE + KK  ARR+R E PRENSEVGVRV+KRGR+IK NVTLQDQGY
Sbjct: 1283 GVERKRKKGLARRRRCETPRENSEVGVRVNKRGRLIKSNVTLQDQGY 1329
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig11273.847.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FNW9_ECTSI3.500e-2198.08Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K6M3_9PHAE4.400e-1076.60Reverse transcriptase Ty1/copia-type domain-contai... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 46..69

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig11273contigE-siliculosus-1a_F_contig11273:824..1183 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig11273.847.1mRNA_E-siliculosus-1a_F_contig11273.847.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig11273 824..1183 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig11273.847.1 ID=prot_E-siliculosus-1a_F_contig11273.847.1|Name=mRNA_E-siliculosus-1a_F_contig11273.847.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=120bp
DIVERASRSSESEQARTLNYKYTTMNQIEGRARKLSASRDAARLQMFNLR
RLASRMRRKLQEYKKEERRAGGVEGQSKKRPARRKRSEKPRENSEVGVRV
SKRGRVIKKNVTLQDQGYS*
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