prot_E-siliculosus-1a_F_contig1125.829.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1125.829.1
Unique Nameprot_E-siliculosus-1a_F_contig1125.829.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length324
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1125.829.1 vs. uniprot
Match: D8LCB7_ECTSI (All0748 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCB7_ECTSI)

HSP 1 Score: 502 bits (1293), Expect = 2.180e-177
Identity = 313/323 (96.90%), Postives = 315/323 (97.52%), Query Frame = 0
Query:    1 MGRDSALAAVALAVALLSRQSLGFHIPAASSRRSLQQRSPHSXXXXXXXXXXXPTLPTRSLLRCPLAAEADXXXXXXXXXXXXXXXXXXXXXAAKKAKARGGAGPAVELKKDANKQPQEVSKSVVAEVLGAQAAKEGGATADQVSARKEIERMETEERERIAKRQERIDSVMQAKAATEGDPDAGSIPEIVSNRMLSRMVPFFLLPALGGVGVFVAVYVLSHKYDYTIPAYIVAYATQAPFFVALAGITYAIMSASWDEDREGTFFGFDEAKRNFGNIVEGLRRSSDRMDVEDMLADQERMTMNRRQRRQMRKEDGGDDEPTA 323
            MGRDSALAAVAL VALLSRQSLGFHIPA SSRRSLQQRSPHS XXXXXXXXXXPTLPTRSLLR PLAAEADXXXXXXXXXXXXXXXXXXXXXAAKKAKARGGAGPAVELKK ANKQPQEVSKSVVAEVLGAQAAKEGGATADQVSARKEIERME EERERIAKRQERIDSVMQAKAATEGDPDAGSIPEIVSNRMLSRMVPFF+LPALGGVGVFV VYVLSHKYDYTIPAYIVAYATQAPFFVALAGITYAIMSASWDEDREGTFFGFDEAKRNFGNIVEGLRRSSDRMDVEDMLADQERM+MNRRQRRQMRKEDGGDDEP A
Sbjct:    1 MGRDSALAAVALVVALLSRQSLGFHIPATSSRRSLQQRSPHSAXXXXXXXXXXPTLPTRSLLRFPLAAEADXXXXXXXXXXXXXXXXXXXXXAAKKAKARGGAGPAVELKKAANKQPQEVSKSVVAEVLGAQAAKEGGATADQVSARKEIERMEAEERERIAKRQERIDSVMQAKAATEGDPDAGSIPEIVSNRMLSRMVPFFVLPALGGVGVFVTVYVLSHKYDYTIPAYIVAYATQAPFFVALAGITYAIMSASWDEDREGTFFGFDEAKRNFGNIVEGLRRSSDRMDVEDMLADQERMSMNRRQRRQMRKEDGGDDEPAA 323          
BLAST of mRNA_E-siliculosus-1a_F_contig1125.829.1 vs. uniprot
Match: A0A6H5L0S3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0S3_9PHAE)

HSP 1 Score: 419 bits (1077), Expect = 1.380e-144
Identity = 270/300 (90.00%), Postives = 273/300 (91.00%), Query Frame = 0
Query:    1 MGRDSALAAVALAVALLSRQSLGFHIPAASSRRSLQQRSPHSXXXXXXXXXXXPTLPTRSLLRCPLAAEADXXXXXXXXXXXXXXXXXXXXXAAKKAKARGGAGPAVELKKDANKQPQEVSKSVVAEVLGAQAAKEGGATADQVSARKEIERMETEERERIAKRQERIDSVMQAKAATEGDPDAGSIPEIVSNRMLSRMVPFFLLPALGGVGVFVAVYVLSHKYDYTIPAYIVAYATQAPFFVALAGITYAIMSASWDEDREGTFFGFDEAKRNFGNIVEGLRRSSDRMDVEDMLADQER 300
            MGRDSALAAVA+AVALLSRQ LGFHIPAASSRRSLQQRSPH XXXXXXXXXXX                  XXXXXXXXXXXXXXXXXX   A+KKAKARGGAGPAVELKK ANKQPQEVSKSVVAEVLGAQAAKEGG+TADQVSARK IERME EERERIAKRQERIDSVMQAKAATEGDPDAGSIPEIVSNRMLSRMVPFFLLPALGGVGVFVAVYVLSHKYDYTIPAYIVAYATQAPFFVALAGITYAIMSASWDEDREGTFFGFDEAKRNFGNIVEGLRRSSDRMDVEDMLADQ R
Sbjct:    1 MGRDSALAAVAVAVALLSRQGLGFHIPAASSRRSLQQRSPHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRKASKKAKARGGAGPAVELKKAANKQPQEVSKSVVAEVLGAQAAKEGGSTADQVSARKAIERMEAEERERIAKRQERIDSVMQAKAATEGDPDAGSIPEIVSNRMLSRMVPFFLLPALGGVGVFVAVYVLSHKYDYTIPAYIVAYATQAPFFVALAGITYAIMSASWDEDREGTFFGFDEAKRNFGNIVEGLRRSSDRMDVEDMLADQAR 300          
BLAST of mRNA_E-siliculosus-1a_F_contig1125.829.1 vs. uniprot
Match: A0A835Z7Y5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7Y5_9STRA)

HSP 1 Score: 164 bits (416), Expect = 1.950e-45
Identity = 87/176 (49.43%), Postives = 133/176 (75.57%), Query Frame = 0
Query:  145 SARKEIERMETEERERIAKRQERIDSVMQAKAATEGDPDAGSIPEIVSNRMLSRMVPFFLLPALGGVGVFVAVYVLSHKYDYTIPAYIVAYATQAPFFVALAGITYAIMSASWDEDREGTFFGFDEAKRNFGNIVEGLRRSSDRMDVEDMLADQERMTMNRRQRRQMRKEDGGDDE 320
            +A++++ RM+ E   R+  +++R+  +  A+A T+ +PDAG IP++V+NRML+RM+PFF+LP L GVGVFV  +VL+ +YD +    +VA+ATQAPF ++L GITYAI+SASWD +REG+  GFDE + N G I+EGLRRSS+R ++++ L +QE+  +NR +RR  R++ GG D+
Sbjct:   94 AAKEDLARMKEERERRVQAQKQRMADIKAAQAITKDNPDAGVIPDLVANRMLARMIPFFVLPVLAGVGVFVYFFVLAKRYDTSFQPGMVAFATQAPFAISLVGITYAILSASWDPEREGSALGFDEFRSNAGAILEGLRRSSERQELDEQLEEQEKR-VNRAERR--RQKGGGSDD 266          
BLAST of mRNA_E-siliculosus-1a_F_contig1125.829.1 vs. uniprot
Match: A0A6U0UN43_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A6U0UN43_9STRA)

HSP 1 Score: 127 bits (320), Expect = 2.040e-31
Identity = 70/179 (39.11%), Postives = 110/179 (61.45%), Query Frame = 0
Query:  117 PQEVSKSVVAEVLGAQAAKEGGATADQVSARKEIERMETEERERIAKRQERIDSVMQAKAATEGDPDAGSIPEIVSNRMLSRMVPFFLLPALGGVGVFVAVYVLSHKYDYTIPAYIVAYATQAPFFVALAGITYAIMSASWDEDREGTFFGFDEAKRNFGNIVEGLRRSSDRMDVEDML 295
            PQE++     EV  AQ++     TA Q    +E++++      + A+R  ++D  ++ +A    +P AG IP+ VS RML RMVP F LP + G+  FVA Y    K    +   +VAY+TQAPFF+ L G++Y ++SASWDED EG+F G +E + N G + +G++R+++R D+ED +
Sbjct:   68 PQEINVGAAEEVNLAQSSARDNLTAGQ----QELQQLRQARASKDAERAAKVDMYVEERAEIRKNPRAGVIPDAVSKRMLGRMVPLFSLPFVLGIAAFVAFYFYGQKTGNQMQPTVVAYSTQAPFFLGLVGLSYGVLSASWDEDEEGSFLGIEEFQTNVGRLFDGVQRAAERRDLEDEI 242          
BLAST of mRNA_E-siliculosus-1a_F_contig1125.829.1 vs. uniprot
Match: A0A7S2STX2_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2STX2_9STRA)

HSP 1 Score: 116 bits (291), Expect = 2.220e-27
Identity = 55/123 (44.72%), Postives = 81/123 (65.85%), Query Frame = 0
Query:  165 QERIDSVMQAKAATEGDPDAGSIPEIVSNRMLSRMVPFFLLPALGGVGVFVAVYVLSHKYDYTIPAYIVAYATQAPFFVALAGITYAIMSASWDEDREGTFFGFDEAKRNFGNIVEGLRRSSD 287
            Q R++ + + +     +PDAG IPE+V+ RML RM+P   +P  GG+ +FV  Y+ + K+D  I   +VAYAT AP+ + LAG+TY I+SASWD + EG+F G +E K N   I +GLRR+ +
Sbjct:   98 QRRLEDMKEVEKVLRENPDAGVIPEVVAQRMLGRMLPLAAVPIFGGIALFVGFYIAATKWDLEIQPTVVAYATTAPWLLGLAGLTYGILSASWDPEVEGSFLGTEEVKLNLSRIADGLRRAGE 220          
BLAST of mRNA_E-siliculosus-1a_F_contig1125.829.1 vs. uniprot
Match: A0A0G4F121_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4F121_VITBC)

HSP 1 Score: 107 bits (268), Expect = 7.190e-24
Identity = 57/142 (40.14%), Postives = 88/142 (61.97%), Query Frame = 0
Query:  181 DPDAGSIPEIVSNRMLSRMVPFFLLPALGGVGVFVAVYVLSHKYDYTIPAYIVAYATQAPFFVALAGITYAIMSASWDEDREGTFFGFDEAKRNFGNIVEGLRRSSDRMDVEDMLADQERMTMNRRQRRQ----MRKEDGGD 318
            D +AG++PE+VS R++SR+VPFFL P       F+  ++L  ++DY I   I+AY TQ  F +AL G++Y I+S+SW+EDREG+F+G DE KRN   +  G+R++    +    +  +  M +  RQ +Q    +R   GGD
Sbjct:  113 DGNAGTMPEVVSQRIISRIVPFFLTPLAFAFSTFIGGFLLYSQFDYRIEPSIIAYITQFSFLLALGGVSYGILSSSWEEDREGSFWGADEFKRNIKRVASGVRQTVKDTETRQRMETRRDMVIKYRQDQQAMDDIRGRGGGD 254          
BLAST of mRNA_E-siliculosus-1a_F_contig1125.829.1 vs. uniprot
Match: A0A7S2BKL3_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BKL3_9STRA)

HSP 1 Score: 103 bits (257), Expect = 2.340e-22
Identity = 62/164 (37.80%), Postives = 92/164 (56.10%), Query Frame = 0
Query:  150 IERMETEERERIAKRQERIDSVMQAKAATEGDPDAGSIPEIVSNRMLSRMVPFFLLPALGGVGVFVAVYVLSHKYDYTIPAYIVAYATQAPFFVALAGITYAIMSASWDEDREGTFFGFDEAKRNFGNIVEGLRRSSDRMDVEDMLADQERMT---MNRRQRRQ 310
            + ++  +  E +AK  ER   + + + A + +P AG IPE V+NRML RM+     P  GG+G+FV  Y+ + ++D  +   IVA AT  P+ + LAG+TY ++SASWD + EG+  G DE K N   I  G+ RS    +  +    Q+R      NR QRRQ
Sbjct:   81 LTKLRAQREEDLAKADERYAELSEVQEALKENPAAGVIPEAVANRMLKRMLTLAAPPIFGGIGLFVVFYISATQWDTDVAPPIVAAATTVPWLLGLAGLTYGVLSASWDPEVEGSALGLDEFKENLKIIGAGVLRSGQDSEFREQYEYQQRKNNAPANREQRRQ 244          
BLAST of mRNA_E-siliculosus-1a_F_contig1125.829.1 vs. uniprot
Match: A0A7S2NSH2_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2NSH2_9EUKA)

HSP 1 Score: 103 bits (257), Expect = 4.420e-22
Identity = 50/95 (52.63%), Postives = 64/95 (67.37%), Query Frame = 0
Query:  181 DPDAGSIPEIVSNRMLSRMVPFFLLPALGGVGVFVAVYVLSHKYDYTIPAYIVAYATQAPFFVALAGITYAIMSASWDEDREGTFFGFDEAKRNF 275
            DP AG +PE+VS RML+R+VPF  LP  GG  VFV  Y  + + +  +P  IVAYATQ    ++ AGITY +MS SWDE++EGT  G +  KRNF
Sbjct:  139 DPSAGVMPEVVSQRMLNRVVPFAALPVFGGALVFVGFYYANTQLELDVPPMIVAYATQVLLLLSFAGITYGVMSTSWDEEKEGTLLGTENLKRNF 233          
BLAST of mRNA_E-siliculosus-1a_F_contig1125.829.1 vs. uniprot
Match: R1FQ09_EMIHU (Uncharacterized protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1FQ09_EMIHU)

HSP 1 Score: 102 bits (253), Expect = 1.090e-21
Identity = 49/104 (47.12%), Postives = 69/104 (66.35%), Query Frame = 0
Query:  181 DPDAGSIPEIVSNRMLSRMVPFFLLPALGGVGVFVAVYVLSHKYDYTIPAYIVAYATQAPFFVALAGITYAIMSASWDEDREGTFFGFDEAKRNFGNIVEGLRR 284
            DP AG +PE+VSNRMLSR+VPF  LP  G   VFV  Y  + + D  +P  ++AYATQA F ++ AGIT+ ++S SWDE+ EG+  G ++  RN   + +G+ R
Sbjct:  113 DPSAGVMPEVVSNRMLSRVVPFAGLPVFGSFLVFVGAYYANTQLDLDVPPQVIAYATQACFALSFAGITWGVLSTSWDEETEGSLLGTEQVGRNVAMMRDGMAR 216          
BLAST of mRNA_E-siliculosus-1a_F_contig1125.829.1 vs. uniprot
Match: W7TZB0_9STRA (Uncharacterized protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TZB0_9STRA)

HSP 1 Score: 100 bits (250), Expect = 6.270e-21
Identity = 47/101 (46.53%), Postives = 69/101 (68.32%), Query Frame = 0
Query:  185 GSIPEIVSNRMLSRMVPFFLLPALGGVGVFVAVYVLSHKYDYTIPAYIVAYATQAPFFVALAGITYAIMSASWDEDREGTFFGFDEAKRNFGNIVEGLRRS 285
            G +PE +SNRML R++PF L P LGG+G+F     L+   +  +P   VA++TQ PF  AL GITY+IMS SW+ + EG+F+GF E K N  N+++ L+++
Sbjct:  171 GYLPERISNRMLKRLLPFILFPVLGGIGLFGFYLYLAKNTEIDVPPAFVAFSTQVPFLAALVGITYSIMSTSWEPEVEGSFWGFTEFKANVLNLLDSLQKT 271          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1125.829.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LCB7_ECTSI2.180e-17796.90All0748 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
A0A6H5L0S3_9PHAE1.380e-14490.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835Z7Y5_9STRA1.950e-4549.43Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6U0UN43_9STRA2.040e-3139.11Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7S2STX2_9STRA2.220e-2744.72Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A0G4F121_VITBC7.190e-2440.14Uncharacterized protein n=1 Tax=Vitrella brassicaf... [more]
A0A7S2BKL3_9STRA2.340e-2237.80Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S2NSH2_9EUKA4.420e-2252.63Hypothetical protein n=1 Tax=Haptolina brevifila T... [more]
R1FQ09_EMIHU1.090e-2147.12Uncharacterized protein n=2 Tax=Emiliania huxleyi ... [more]
W7TZB0_9STRA6.270e-2146.53Uncharacterized protein n=3 Tax=Monodopsidaceae Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021855PAM68-likePFAMPF11947DUF3464coord: 151..284
e-value: 2.4E-31
score: 108.5
IPR021855PAM68-likePANTHERPTHR34575FAMILY NOT NAMEDcoord: 158..287
NoneNo IPR availablePANTHERPTHR34575:SF1PROTEIN PAM68, CHLOROPLASTICcoord: 158..287
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..23
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 221..231
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 199..220
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 232..253
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 24..198
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 254..323
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..17
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..23
score: 0.626
NoneNo IPR availableTMHMMTMhelixcoord: 232..254
NoneNo IPR availableTMHMMTMhelixcoord: 200..222

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1125contigE-siliculosus-1a_F_contig1125:2487..7379 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1125.829.1mRNA_E-siliculosus-1a_F_contig1125.829.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1125 1455..7435 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1125.829.1 ID=prot_E-siliculosus-1a_F_contig1125.829.1|Name=mRNA_E-siliculosus-1a_F_contig1125.829.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=324bp
MGRDSALAAVALAVALLSRQSLGFHIPAASSRRSLQQRSPHSAASPPPNQ
QRRPTLPTRSLLRCPLAAEADDGGGGGGFSSAAAGGEKRSRKAAKKAKAR
GGAGPAVELKKDANKQPQEVSKSVVAEVLGAQAAKEGGATADQVSARKEI
ERMETEERERIAKRQERIDSVMQAKAATEGDPDAGSIPEIVSNRMLSRMV
PFFLLPALGGVGVFVAVYVLSHKYDYTIPAYIVAYATQAPFFVALAGITY
AIMSASWDEDREGTFFGFDEAKRNFGNIVEGLRRSSDRMDVEDMLADQER
MTMNRRQRRQMRKEDGGDDEPTA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR021855PAM68-like