prot_E-siliculosus-1a_F_contig1124.827.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1124.827.1
Unique Nameprot_E-siliculosus-1a_F_contig1124.827.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length111
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig1124.827.1 vs. uniprot
Match: D7FTN2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTN2_ECTSI)

HSP 1 Score: 146 bits (368), Expect = 5.860e-43
Identity = 80/108 (74.07%), Postives = 86/108 (79.63%), Query Frame = 0 
Query:    1 RAHTPLVRRVESVRQALQDLVWSLLRVPNVLNHDAWECVSMFLVSEDED---SDLADYLERNTFIDCSALRTRAGVPQTTKSKTRQDGSSRNSKKRFVESVKSHFWTA 105
            R  +PLV R E+V QALQDL+WSLLRVP VL+H  WE  S  LV  DE    SDLAD LERNTFIDCSALRTRAGVPQTTKSK+R  GSSRNSKKRFVESV SHFWT+
Sbjct:   28 RPRSPLVCRGETVHQALQDLLWSLLRVPYVLSHPCWETASEVLVPADEGQRRSDLADILERNTFIDCSALRTRAGVPQTTKSKSRSPGSSRNSKKRFVESVTSHFWTS 135
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1124.827.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FTN2_ECTSI5.860e-4374.07Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1124contigE-siliculosus-1a_F_contig1124:27125..28709 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1124.827.1mRNA_E-siliculosus-1a_F_contig1124.827.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1124 27124..28709 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1124.827.1 ID=prot_E-siliculosus-1a_F_contig1124.827.1|Name=mRNA_E-siliculosus-1a_F_contig1124.827.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=111bp
RAHTPLVRRVESVRQALQDLVWSLLRVPNVLNHDAWECVSMFLVSEDEDS
DLADYLERNTFIDCSALRTRAGVPQTTKSKTRQDGSSRNSKKRFVESVKS
HFWTAYWRAST
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