prot_E-siliculosus-1a_F_contig1123.822.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1123.822.1
Unique Nameprot_E-siliculosus-1a_F_contig1123.822.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length492
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig1123.822.1 vs. uniprot
Match: D8LFQ8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFQ8_ECTSI)

HSP 1 Score: 644 bits (1661), Expect = 1.290e-229
Identity = 364/491 (74.13%), Postives = 368/491 (74.95%), Query Frame = 0 
Query:    1 MSALRVLVASLVSCLTITYIIGGNSQTWPSPDAAAATAIASSDFLFSVDVVLDESAAAVPLGIRDGQTVAEAALGFCHEQGLDGAMQSALMPQLMKVLEDGIAEVVGPPLPVGDEASIPSSDAGRAASDAQRDVPEDSKLVDPVLTLGISIDGNEERPLFYYTGQASMSFSNTIRTIHSNPEKVAVAFCTENLVSESLPEDLARCSGAVSAHITETLGTTDEPLRHDTLPKQHQQXXXXXXXXXXXXGQEHLETHGSLEESDPSSADGVAVEGLLMTVPLNVNGVETVLQIFRDSNAKDLASDFCRRAEFGLEGSFLESCFSQMVDIVHRAVATYERQDDQNGEPPERTPFTFKVPVTLAGLQLHAEFTTTETPRTSARRFCTLNLPVIESALGLDAYEGEDEGRDEEGAAGVGFFMSEGRKSLREACTVVVEDAINAVLLGMRERVLEAELTQANSTDSSSYDDSSDGWPQEGSARGAWAASQIAADTMA 491
            MSALRVLVASLVSCLTITYIIGGNSQTWPS DAAAATAIASSDFLFSVDVVLDESA AVPLGIRDGQTVAEAALGFCHEQGLDGAMQSALMPQLMKVLEDGI EVVGPP PVGDEASIPSSDA R ASDAQRDVP+DSKL DPVLTLGISIDGNEERPLFYYTGQ                                                                                                           GLLMTVPLNVNGVETVLQIFRDSNAKDLASDFCRR EFGLEGSFLESC SQMVDIVHRAVATYERQDDQ+GEPPERTPFTFKVPVTLAGLQLHAEF TTETPRTSARRFCT NLPVIESALGLDAYEGEDEGR EE + GVGFF+SEGRKSLREACTVVVEDAINAVLLGMRERVLEAELTQANST SSSYDDSSDGWPQEGSARGAWAASQIAADT A
Sbjct:    1 MSALRVLVASLVSCLTITYIIGGNSQTWPS-DAAAATAIASSDFLFSVDVVLDESAVAVPLGIRDGQTVAEAALGFCHEQGLDGAMQSALMPQLMKVLEDGITEVVGPPFPVGDEASIPSSDAERVASDAQRDVPDDSKLADPVLTLGISIDGNEERPLFYYTGQ-----------------------------------------------------------------------------------------------------------GLLMTVPLNVNGVETVLQIFRDSNAKDLASDFCRREEFGLEGSFLESCSSQMVDIVHRAVATYERQDDQSGEPPERTPFTFKVPVTLAGLQLHAEFKTTETPRTSARRFCTPNLPVIESALGLDAYEGEDEGRGEEESTGVGFFLSEGRKSLREACTVVVEDAINAVLLGMRERVLEAELTQANSTYSSSYDDSSDGWPQEGSARGAWAASQIAADTTA 383
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BLAST of mRNA_E-siliculosus-1a_F_contig1123.822.1 vs. uniprot
Match: A0A6H5KRC8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRC8_9PHAE)

HSP 1 Score: 311 bits (796), Expect = 2.360e-101
Identity = 158/173 (91.33%), Postives = 164/173 (94.80%), Query Frame = 0 
Query:  276 MTVPLNVNGVETVLQIFRDSNAKDLASDFCRRAEFGLEGSFLESCFSQMVDIVHRAVATYERQDDQNGEPPERTPFTFKVPVTLAGLQLHAEFTTTETPRTSARRFCTLNLPVIESALGLDAYEGEDEGRDEEGAAGVGFFMSEGRKSLREACTVVVEDAINAVLLGMRERVL 448
            MTVPLNVNGVETVLQIFR SNAK+LASDFCRRAEF LEGSFLESC SQMVDIVHRAVATYERQDDQNGEPPE+TPFTFKVPVTLAGLQLHAEF TTETPRTSARRFCT NLPVIESALG+DA+E   EGRDEEG+ GVGFFMSEGRKSLREACTVVVEDAINAVLLGMRER+L
Sbjct:    1 MTVPLNVNGVETVLQIFRGSNAKELASDFCRRAEFRLEGSFLESCCSQMVDIVHRAVATYERQDDQNGEPPEQTPFTFKVPVTLAGLQLHAEFKTTETPRTSARRFCTPNLPVIESALGIDAFEEAGEGRDEEGSTGVGFFMSEGRKSLREACTVVVEDAINAVLLGMRERLL 173
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1123.822.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LFQ8_ECTSI1.290e-22974.13Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KRC8_9PHAE2.360e-10191.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 36..491
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..35
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..35

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1123contigE-siliculosus-1a_F_contig1123:18921..22754 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1123.822.1mRNA_E-siliculosus-1a_F_contig1123.822.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1123 18921..22754 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1123.822.1 ID=prot_E-siliculosus-1a_F_contig1123.822.1|Name=mRNA_E-siliculosus-1a_F_contig1123.822.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=492bp
MSALRVLVASLVSCLTITYIIGGNSQTWPSPDAAAATAIASSDFLFSVDV
VLDESAAAVPLGIRDGQTVAEAALGFCHEQGLDGAMQSALMPQLMKVLED
GIAEVVGPPLPVGDEASIPSSDAGRAASDAQRDVPEDSKLVDPVLTLGIS
IDGNEERPLFYYTGQASMSFSNTIRTIHSNPEKVAVAFCTENLVSESLPE
DLARCSGAVSAHITETLGTTDEPLRHDTLPKQHQQQHQQQHQQQLQQGQE
HLETHGSLEESDPSSADGVAVEGLLMTVPLNVNGVETVLQIFRDSNAKDL
ASDFCRRAEFGLEGSFLESCFSQMVDIVHRAVATYERQDDQNGEPPERTP
FTFKVPVTLAGLQLHAEFTTTETPRTSARRFCTLNLPVIESALGLDAYEG
EDEGRDEEGAAGVGFFMSEGRKSLREACTVVVEDAINAVLLGMRERVLEA
ELTQANSTDSSSYDDSSDGWPQEGSARGAWAASQIAADTMA*
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