prot_E-siliculosus-1a_F_contig1123.821.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1123.821.1
Unique Nameprot_E-siliculosus-1a_F_contig1123.821.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length1448
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1123.821.1 vs. uniprot
Match: D8LFQ9_ECTSI (WW domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFQ9_ECTSI)

HSP 1 Score: 1770 bits (4585), Expect = 0.000e+0
Identity = 1074/1333 (80.57%), Postives = 1098/1333 (82.37%), Query Frame = 0
Query:    1 MEAERRRRSDDRERAAYDGCSPASAAVLGSTTDCLTPPKLDGQGGDRDLALATKPERGVRTAWPDRAAGRATGGYRERSDMGGGGRGGG---RNARRAVSPTLPLEGLHKMEGCFVTPKKISGHVLLGNRGXXXXXXXXXXARRMGVSPSDHEPVRIAPMVCHDRSDDXXXXXCGYDSGGTFYDEDSSGAATSTHTRTAAKQHGNDRAYPLGFSTTEARPVDRGDRRTGST---AVVDDFPRKQTESSRFVVGRSSERMSAAESMGRGGXXXKLGASRGQXXXXXXPPWLGGVAASRHDAAELLTVEHDEWKEARTAEGKIYYYNRRTRVPRWTLPPTATYVPDPSRPAGYRIFALAATVNISIGDKSTAPASAASGSERTSGGVIDPRLGGPGGAGVGGAQEADSSRERFGRDNSGGGGAPLSNAPTLLEVTPMTTSDLESPAASSPTTAATVGDPTTPAAASARVKNGAGTTRFGDEGAATTPKRRFVVHKSGLRAPSSLSAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPPAAAAAWSPRDNDGTVETLTATETAYSVSASPAPPTGCLSADETAFLVDKNHDDDKHPERPVSPTAPRLSRSVGHAMSVPSAGGGAGFEGGATPSGAXXXXXXXXXXXXXXXXXXXXXXSAVGEGKAPRRQVEEGVEVGSTCLTGVLPDEPAAVTTRXXXXXXXADAMRGGERFETEAQLTVDSPTTC-AGGVEADKELEMEAAAAMATGQQALSSQSGGAGQRKEDQRCHVGGWGSPSSQTSSSASLKDFVHYVRVQSGGRGEASLSSPASRSNRTRGGGQGAGAMRSGDAHMSKDKEAFSSERIPGTFHRRPLGPVRRSEEMEHPLSSRS-KPQEHXXXXGPEEPAAVTALWATAAETPTTALAGVPVYETHXXXXX-SSRSRRSAQADTIRYSGSGVGGGKAGGXXXXXXXXXXXXLLPGSSVLRHRVRRQLFSEDSEARPLVFCPFCGEGVVRAGGLRDHLQECYVLDRCRGSETHKQVEVAIKAVSVEHQMHTSATNTHGEGASSRKDGSFQDSSTLLQHALPPFVSKGNGRENVLAPAVASENSELGGVVATGGGRVAAAGEVSGVGSEVSLGGGG--GAEVERCEDCGLTFAPGRLRSHAKACRSVFLERRRPYDPKAMRARGTPLEFFQQPIGAASSDGNPFTSGKGGDGGGTATSRRGVGRNKPSPVGGSSVRREGSSQSGDADRVSPGGLDVSVGAGGGSSRGLGGEVGGSFLRRSKKVTLKTLPAVEGSAHCPFCSSSIPRAKLSAHLLRCKKSRRSQTCPRPEAGPSPRISGTDASNTTTIDED 1322
            MEAE RRRSD+RERAAYDG SPASAA+LGSTTDCLTPPKLDGQGGDRDLAL  KPER VRTAWPDRAAGRATGGY ERSD GG         RNAR AVSPTLPLEGLHKMEGCFVTPKKISGHVLLGNRGXXXXXXXX   RRMGVSPSDHEPVRIAPMV HDRSD XXXXX                AATS HTRTAAKQH NDRAY LGFSTTE RPVDRGDR+TGST   AVVDDFP KQTESSRFVVGRSSERMSAAESMGRG XXX        XXXXXX   LGGVAA+ HDAAELLTVEHDEWKEARTAEGKIYYYNRRTRVPRWTLPPTAT+VPDP+RPAGYRIFALAATVNI+IGDKSTAPASA SGSERTSGGVIDP L GPGGAG GGA+EADSSRERFGRDNSGGGGAPL  APTL EVTPMTTSDLESPAASSPTT            ASARVKNG GTT  GD GA TTPKRR                                               APPAAA   SPRDN GTVETLT+TE A++VSASPAPPTG  SADETA LV+K  DDDKHPERPVSPTAPRLS SVGH+MSVPSAGGGAG EGGA P        XXXXXXXXXXXXXXXX SAVGEGK PRRQVE GVEVGS CLT VLPDEPAAVTTR  XXXXX   +R GE FETEAQLTVD+PTT  AG V+ D+ELEMEAAAAMATGQQ LSSQSGGAGQR                   SSASL+DFVHYVRVQSGGRG+ASLSSPASRSNR RGGGQGAGAMRSGDAHMSKDKEAFSSERIPGTFHRRPLGPVRRSEEMEHPLSSRS KPQEH    G EEPAA TALWATAAETPTTALAGVPVY+THXXXXX SSRSRRSAQADT+RYSGSGV GGK G             LLPGSSVLRHRVRRQLFSEDSEARPLVFCPFCGEGVVRAGGLRDHLQECYVLDRCRGSETHKQVEVAI+AVSVEHQMHTSATNTHG+GASS   GSFQDSSTLLQHALPPFVSKGNG ENVLAPAVASENSELGGVVATGGGR AAAGEVSGVG EVSLGGGG  GAE ERC DCG TFAPGRLRSHAKACRSVFLERRRPYDPKAMRARGTPLEFFQQPIGAASSDGNP TSG GGDGGGTA SRRGVGRN PS VGGSSVRREGSSQSG AD VSPG LDVSVG GGGSSRG GGEVGGSFLRRSKKV LKTLPAVEGSAHCPFCS+SIPRAKLSAHLLRCKK RRSQTCPRPEAGPSPRI GTDASNTTTIDED
Sbjct:    1 MEAEHRRRSDERERAAYDGSSPASAALLGSTTDCLTPPKLDGQGGDRDLALVMKPERAVRTAWPDRAAGRATGGYCERSDRGGXXXXXXXXXRNAR-AVSPTLPLEGLHKMEGCFVTPKKISGHVLLGNRGXXXXXXXX---RRMGVSPSDHEPVRIAPMVRHDRSDXXXXXXXXXXXXXXXXXXXX--AATSMHTRTAAKQHENDRAYTLGFSTTETRPVDRGDRKTGSTGATAVVDDFPWKQTESSRFVVGRSSERMSAAESMGRGXXXXXXXXXXXXXXXXXXXXCLGGVAAAGHDAAELLTVEHDEWKEARTAEGKIYYYNRRTRVPRWTLPPTATFVPDPNRPAGYRIFALAATVNINIGDKSTAPASATSGSERTSGGVIDPLLRGPGGAGAGGAREADSSRERFGRDNSGGGGAPLLIAPTLSEVTPMTTSDLESPAASSPTTXXXXXXXXXXXXASARVKNGVGTTGCGDGGAVTTPKRR---------------------------------------------ESAPPAAAR--SPRDNGGTVETLTSTENAHTVSASPAPPTGYFSADETASLVEKTRDDDKHPERPVSPTAPRLSCSVGHSMSVPSAGGGAGIEGGAAPP-------XXXXXXXXXXXXXXXXGSAVGEGKTPRRQVEHGVEVGSACLTEVLPDEPAAVTTRAAXXXXXX--VREGEEFETEAQLTVDAPTTGGAGPVKTDRELEMEAAAAMATGQQGLSSQSGGAGQRXXXXXXXXXXXXXXXXXXXSSASLQDFVHYVRVQSGGRGDASLSSPASRSNRRRGGGQGAGAMRSGDAHMSKDKEAFSSERIPGTFHRRPLGPVRRSEEMEHPLSSRSSKPQEHHSHQGLEEPAADTALWATAAETPTTALAGVPVYQTHXXXXXXSSRSRRSAQADTVRYSGSGVSGGKTGVCDAKGGSSGGRGLLPGSSVLRHRVRRQLFSEDSEARPLVFCPFCGEGVVRAGGLRDHLQECYVLDRCRGSETHKQVEVAIRAVSVEHQMHTSATNTHGKGASSLNGGSFQDSSTLLQHALPPFVSKGNGPENVLAPAVASENSELGGVVATGGGRGAAAGEVSGVGLEVSLGGGGAGGAEEERCGDCGRTFAPGRLRSHAKACRSVFLERRRPYDPKAMRARGTPLEFFQQPIGAASSDGNPSTSGTGGDGGGTAASRRGVGRNNPSSVGGSSVRREGSSQSGGADCVSPGELDVSVGTGGGSSRGAGGEVGGSFLRRSKKVALKTLPAVEGSAHCPFCSTSIPRAKLSAHLLRCKKLRRSQTCPRPEAGPSPRIGGTDASNTTTIDED 1271          
BLAST of mRNA_E-siliculosus-1a_F_contig1123.821.1 vs. uniprot
Match: A0A6H5KQR3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQR3_9PHAE)

HSP 1 Score: 850 bits (2197), Expect = 2.040e-293
Identity = 502/593 (84.65%), Postives = 511/593 (86.17%), Query Frame = 0
Query:  858 LSSRSKPQEHXXXXGPEEPAAVTALWATAAETPTTALAGVPVYETHXXXXXSSRSRRSAQADTIRYSGSGVGGGKAGGXXXXXXXXXXXXLLPGSSVLRHRVRRQLFSEDSEARPLVFCPFCGEGVVRAGGLRDHLQECYVLDRCRGSETHKQVEVAIKAVSVEHQMHTSATNTHGEGASSRKDGSFQDSSTLLQHALPPFVSKGNGRENVLAPAVASENSELGGVVATGGGRVAAAGEVSGVGSEVSLGGGG--GAEVERCEDCGLTFAPGRLRSHAKACRSVFLERRRPYDPKAMRARGTPLEFFQQPIGAASSDGNPFTSGKGGDGGGTATSRRGVGRNKPSPVGGSSVRREGSSQSGDADRVSPGGLDVSVGAGGGSSRGLGGEVGGSFLRRSKKVTLKTLPAVEGSAHCPFCSSSIPRAKLSAHLLRCKKSRRSQTCPRPEAGPSPRISGTDASNTTTIDEDXXXXXXXXXXXXXXXXXXXXX-NPSRKVRCPHCLRGFSPAVAPTHVSICARVENRPKGSGTAKAAAARKDDAQKKVALGVDYTAASPPGGRKGLXXXXXXXXXXXXXXXXXXXXXPEKARVMPPFY 1447
              S SKPQEH    GPEEPAAVTAL A+AAETPTTALAGVP Y+TH     SSRSRRSAQADT+RYSGSGVGGG    XXXXXXX     LLPGSSVLRHRVRRQLFSEDSEARPLVFCPFCGEGVVRA GLRDHLQECYVLDRCRGSETHKQVEVAIKAVSVE+QMHTSATNTHG  ASS  DGSFQDSSTLLQHAL PFVSKGN  ENVLAPAVASENSELG VVATGG R  A GEVSGV SEVS GGGG  GA+ ERCEDCG TFAPGRLRSHAKACRSVFLERRRPYDPKAMRARGTPLEFFQQPIGAASSD NP TSGKGGDGGG A SRRGVGRNKPS VGGSSVRREGSS+SGDADRVSPGGLDVSVG GGGSSRG+GGEVGGSFLRRSKKV LKTLPAVEG AHCPFCSSSIPRAKLSAHLLRCKK RRSQTCPRP+ GPSPRISGTDASN T I ED           XXXXXXXXXX N SRKVRCPHCLRGFSPAVAPTH+SICARVENRPKGSGTAKAAAARKDDAQKKVALGV YT ASPPGGRKGL         XXXXXXXXX   PEKARVMPPFY
Sbjct:    8 FESSSKPQEHHPHLGPEEPAAVTALGASAAETPTTALAGVPGYQTHHHHP-SSRSRRSAQADTVRYSGSGVGGGNXXXXXXXXXXSEGRGLLPGSSVLRHRVRRQLFSEDSEARPLVFCPFCGEGVVRARGLRDHLQECYVLDRCRGSETHKQVEVAIKAVSVENQMHTSATNTHGRRASSLNDGSFQDSSTLLQHALSPFVSKGNDPENVLAPAVASENSELGRVVATGGLRGTAGGEVSGVSSEVSSGGGGAGGAKFERCEDCGRTFAPGRLRSHAKACRSVFLERRRPYDPKAMRARGTPLEFFQQPIGAASSD-NPTTSGKGGDGGGNAASRRGVGRNKPSSVGGSSVRREGSSESGDADRVSPGGLDVSVGTGGGSSRGVGGEVGGSFLRRSKKVALKTLPAVEGRAHCPFCSSSIPRAKLSAHLLRCKKLRRSQTCPRPKTGPSPRISGTDASNATVIHEDDKARTATYNGGXXXXXXXXXXXNASRKVRCPHCLRGFSPAVAPTHISICARVENRPKGSGTAKAAAARKDDAQKKVALGVGYTDASPPGGRKGLAASHGSSGAXXXXXXXXX---PEKARVMPPFY 595          
BLAST of mRNA_E-siliculosus-1a_F_contig1123.821.1 vs. uniprot
Match: A0A835Z7V0_9STRA (WW domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7V0_9STRA)

HSP 1 Score: 63.9 bits (154), Expect = 2.660e-6
Identity = 32/65 (49.23%), Postives = 40/65 (61.54%), Query Frame = 0
Query:  953 SVLRHRVRRQLFSEDSEARPLVFCPFCGEGVVRAGGLRDHLQECYVLDRCRGSETHKQVEVAIKA 1017
            S +RH  RRQLFSE + A+P V+CP+CGE    A  L  HL  C VL+R RG    + VE A+ A
Sbjct:  683 SAVRHGPRRQLFSEGAPAQPSVYCPYCGER-EDAAALAAHLAACVVLERARGGPAQRSVEAALLA 746          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1123.821.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LFQ9_ECTSI0.000e+080.57WW domain-containing protein n=1 Tax=Ectocarpus si... [more]
A0A6H5KQR3_9PHAE2.040e-29384.65Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835Z7V0_9STRA2.660e-649.23WW domain-containing protein n=1 Tax=Tribonema min... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001202WW domainSMARTSM00456ww_5coord: 300..332
e-value: 6.2E-4
score: 29.1
IPR001202WW domainPFAMPF00397WWcoord: 303..330
e-value: 1.3E-6
score: 28.3
IPR001202WW domainPROSITEPS50020WW_DOMAIN_2coord: 305..332
score: 10.955
NoneNo IPR availableGENE3D2.20.70.10coord: 303..332
e-value: 3.7E-9
score: 37.8
IPR026104Zinc finger C2HC domain-containing protein 1CPANTHERPTHR14649FAMILY NOT NAMEDcoord: 1349..1378
coord: 1114..1178
IPR036020WW domain superfamilySUPERFAMILY51045WW domaincoord: 304..333

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1123contigE-siliculosus-1a_F_contig1123:3005..16849 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1123.821.1mRNA_E-siliculosus-1a_F_contig1123.821.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1123 1682..17553 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1123.821.1 ID=prot_E-siliculosus-1a_F_contig1123.821.1|Name=mRNA_E-siliculosus-1a_F_contig1123.821.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=1448bp
MEAERRRRSDDRERAAYDGCSPASAAVLGSTTDCLTPPKLDGQGGDRDLA
LATKPERGVRTAWPDRAAGRATGGYRERSDMGGGGRGGGRNARRAVSPTL
PLEGLHKMEGCFVTPKKISGHVLLGNRGGGGGGGGGGGARRMGVSPSDHE
PVRIAPMVCHDRSDDDDNNNCGYDSGGTFYDEDSSGAATSTHTRTAAKQH
GNDRAYPLGFSTTEARPVDRGDRRTGSTAVVDDFPRKQTESSRFVVGRSS
ERMSAAESMGRGGGGGKLGASRGQAAAGGGPPWLGGVAASRHDAAELLTV
EHDEWKEARTAEGKIYYYNRRTRVPRWTLPPTATYVPDPSRPAGYRIFAL
AATVNISIGDKSTAPASAASGSERTSGGVIDPRLGGPGGAGVGGAQEADS
SRERFGRDNSGGGGAPLSNAPTLLEVTPMTTSDLESPAASSPTTAATVGD
PTTPAAASARVKNGAGTTRFGDEGAATTPKRRFVVHKSGLRAPSSLSAAT
AAAAAATTSTLPETPTTATTDDADDQKNDAPPAAAAAWSPRDNDGTVETL
TATETAYSVSASPAPPTGCLSADETAFLVDKNHDDDKHPERPVSPTAPRL
SRSVGHAMSVPSAGGGAGFEGGATPSGAGSSTGGQAAAVGGRGPTVSGRG
SAVGEGKAPRRQVEEGVEVGSTCLTGVLPDEPAAVTTRAAAAAAAADAMR
GGERFETEAQLTVDSPTTCAGGVEADKELEMEAAAAMATGQQALSSQSGG
AGQRKEDQRCHVGGWGSPSSQTSSSASLKDFVHYVRVQSGGRGEASLSSP
ASRSNRTRGGGQGAGAMRSGDAHMSKDKEAFSSERIPGTFHRRPLGPVRR
SEEMEHPLSSRSKPQEHHHHQGPEEPAAVTALWATAAETPTTALAGVPVY
ETHHHHHLSSRSRRSAQADTIRYSGSGVGGGKAGGGDTKGSSSAGGGLLP
GSSVLRHRVRRQLFSEDSEARPLVFCPFCGEGVVRAGGLRDHLQECYVLD
RCRGSETHKQVEVAIKAVSVEHQMHTSATNTHGEGASSRKDGSFQDSSTL
LQHALPPFVSKGNGRENVLAPAVASENSELGGVVATGGGRVAAAGEVSGV
GSEVSLGGGGGAEVERCEDCGLTFAPGRLRSHAKACRSVFLERRRPYDPK
AMRARGTPLEFFQQPIGAASSDGNPFTSGKGGDGGGTATSRRGVGRNKPS
PVGGSSVRREGSSQSGDADRVSPGGLDVSVGAGGGSSRGLGGEVGGSFLR
RSKKVTLKTLPAVEGSAHCPFCSSSIPRAKLSAHLLRCKKSRRSQTCPRP
EAGPSPRISGTDASNTTTIDEDDKARTATYNGGGIANNNSSSSNPSRKVR
CPHCLRGFSPAVAPTHVSICARVENRPKGSGTAKAAAARKDDAQKKVALG
VDYTAASPPGGRKGLAASHGSSGARRWQQQQQQQQQPEKARVMPPFY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036020WW_dom_sf
IPR026104ZNF_C2HC_dom_1C
IPR001202WW_dom