prot_E-siliculosus-1a_F_contig1120.806.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1120.806.1
Unique Nameprot_E-siliculosus-1a_F_contig1120.806.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length364
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig1120.806.1 vs. uniprot
Match: A0A6H5KSN1_9PHAE (RRM domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KSN1_9PHAE)

HSP 1 Score: 315 bits (807), Expect = 7.190e-105
Identity = 181/192 (94.27%), Postives = 184/192 (95.83%), Query Frame = 0 
Query:  172 MADEVDFEPEYEEEQPMDDADNGQAXXXXXXXXXXXXXXXXXXXXXXXXXKGGKGRKGGAKGRGHQGGSMEVEDRYEGRGGVFESVDVGSVGGPQRSVEGWILFVRNVHEEAQEDDIMDKFSEYGAVKNLHVNLDRRTGFVKGYCLVEFEKKEEAQAAIDEMDGSQLLEQDISVSWAFMRGGKGAGQPRRRR 363
            MADEVDFEPEYEEEQPMDDADNGQA       XXXXXXXXXXXXXXXXXXKGGKGRKGGAKGRGHQGGSMEVEDRYEGRGGVFESVDVGS GGPQRSVEGWILFVRNVHEEAQEDDIMDKFSEYGAVKNLHVNLDRRTGFVKGYCLVEFEKKEEAQAAIDEMDGSQLL+QDISVSWAF++GGKGAGQPRRRR
Sbjct:    1 MADEVDFEPEYEEEQPMDDADNGQAGGREGQAXXXXXXXXXXXXXXXXXXKGGKGRKGGAKGRGHQGGSMEVEDRYEGRGGVFESVDVGSAGGPQRSVEGWILFVRNVHEEAQEDDIMDKFSEYGAVKNLHVNLDRRTGFVKGYCLVEFEKKEEAQAAIDEMDGSQLLDQDISVSWAFVKGGKGAGQPRRRR 192
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BLAST of mRNA_E-siliculosus-1a_F_contig1120.806.1 vs. uniprot
Match: A0A7S2G621_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G621_9STRA)

HSP 1 Score: 180 bits (456), Expect = 3.770e-52
Identity = 94/140 (67.14%), Postives = 112/140 (80.00%), Query Frame = 0 
Query:  224 GKGRKGGAK--GRGHQGGSMEVEDRYEGRGGVFESVDVGSVGGPQRSVEGWILFVRNVHEEAQEDDIMDKFSEYGAVKNLHVNLDRRTGFVKGYCLVEFEKKEEAQAAIDEMDGSQLLEQDISVSWAFMRGGKGAGQPRR 361
            GKG+ GG K  GRG +GG+ E  +RY+GRGGVFESVD G  GGP +SVEGWILFVRNVHEEAQEDDI+DKFSE G V+N+HVNLDRRTGFVKGY LVEFE +EEA+ AI+ ++G +LL Q ISV WAF+  G G  + R+
Sbjct:   33 GKGKGGGGKQKGRGFKGGNDE--ERYDGRGGVFESVDAGGEGGPLQSVEGWILFVRNVHEEAQEDDILDKFSESGDVRNIHVNLDRRTGFVKGYALVEFESREEAENAIETLNGEELLGQTISVDWAFLDAGSGKKKGRK 170
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BLAST of mRNA_E-siliculosus-1a_F_contig1120.806.1 vs. uniprot
Match: A0A7S2DBP5_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DBP5_9STRA)

HSP 1 Score: 169 bits (429), Expect = 2.800e-48
Identity = 87/133 (65.41%), Postives = 102/133 (76.69%), Query Frame = 0 
Query:  232 KGRGHQGGSMEVEDRYEGRGGVFESVDVGSVGGPQRSVEGWILFVRNVHEEAQEDDIMDKFSEYGAVKNLHVNLDRRTGFVKGYCLVEFEKKEEAQAAIDEMDGSQLLEQDISVSWAFMR-GGKGAGQPRRRR 363
            KGRGH G +M+ EDRY+GRGG+FESV+     GP  SVEGWILF+R VHEEAQEDDI+DKF E G V+N+HVNLDRRTGFVKGY LVE+E  EEA +AI+  +G +LL Q ISV WAF+   GK    PRRRR
Sbjct:   31 KGRGHTGTAMDTEDRYDGRGGIFESVETADGVGPAESVEGWILFIRGVHEEAQEDDILDKFLECGEVRNIHVNLDRRTGFVKGYALVEYESFEEATSAIETFNGQELLGQTISVDWAFLSDSGK---HPRRRR 160
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BLAST of mRNA_E-siliculosus-1a_F_contig1120.806.1 vs. uniprot
Match: A0A7S3GV69_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GV69_9STRA)

HSP 1 Score: 166 bits (419), Expect = 8.160e-47
Identity = 81/121 (66.94%), Postives = 97/121 (80.17%), Query Frame = 0 
Query:  232 KGRGHQGG-SMEVEDRYEGRGGVFESVDVGSVGGPQRSVEGWILFVRNVHEEAQEDDIMDKFSEYGAVKNLHVNLDRRTGFVKGYCLVEFEKKEEAQAAIDEMDGSQLLEQDISVSWAFMR 351
            KGRGH  G   +  DRY GRGGVFE++  GS  GP +S+EGWI+FV NVH+EAQEDDI+DKFSEYG VKN+HVNLDRRTGFVKGY LVEFE+ ++AQAAI  +DG +LL+Q I V WAF +
Sbjct:   39 KGRGHNSGHDGDDGDRYNGRGGVFENIQRGSGAGPLQSIEGWIVFVTNVHQEAQEDDILDKFSEYGTVKNIHVNLDRRTGFVKGYALVEFEELKDAQAAIQGLDGKKLLDQVIQVDWAFKK 159
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BLAST of mRNA_E-siliculosus-1a_F_contig1120.806.1 vs. uniprot
Match: A0A7S2S198_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S198_9STRA)

HSP 1 Score: 155 bits (391), Expect = 1.630e-42
Identity = 75/123 (60.98%), Postives = 97/123 (78.86%), Query Frame = 0 
Query:  232 KGRGHQGGSMEVEDRYEGRGGVFESVDVGSVGGPQRSVEGWILFVRNVHEEAQEDDIMDKFSEYGAVKNLHVNLDRRTGFVKGYCLVEFEKKEEAQAAIDEMDGSQLLEQDISVSWAFMRGGK 354
            KGRGH   +M+ E+RYEGRGGVF+S+  G   GP +SVEGWILFVR VHEEAQEDDI+DKF+++G V+N+ VNLDRRTGFVKGY L+E+ + +EA  A++ M+G ++L Q ISV WAF+   K
Sbjct:   39 KGRGHVA-AMDAEERYEGRGGVFDSI-AGDGPGPAKSVEGWILFVRGVHEEAQEDDILDKFADFGEVRNIAVNLDRRTGFVKGYALIEYAEHDEAAKALEAMNGDEILGQTISVDWAFLESSK 159
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BLAST of mRNA_E-siliculosus-1a_F_contig1120.806.1 vs. uniprot
Match: A0A7S0E2Z3_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0E2Z3_9CRYP)

HSP 1 Score: 151 bits (381), Expect = 3.460e-41
Identity = 74/121 (61.16%), Postives = 92/121 (76.03%), Query Frame = 0 
Query:  232 KGRGHQGGSMEVEDRYEGRGGVFESVDVGSVGGPQRSVEGWILFVRNVHEEAQEDDIMDKFSEYGAVKNLHVNLDRRTGFVKGYCLVEFEKKEEAQAAIDEMDGSQLLEQDISVSWAFMRG 352
            KGRG   GS   EDRY G+ G FESVD     GP +SVEGWI+FV  +HEEA E+DI DKFSEYG +K + + LDRRTGFVKGY LVE+EKK EAQ AI++M+G++L+EQ ++V WAF +G
Sbjct:   26 KGRGTGDGSTR-EDRYAGKSGQFESVDTEGGPGPSKSVEGWIVFVMGIHEEANEEDIYDKFSEYGEIKQMQLPLDRRTGFVKGYALVEYEKKSEAQKAIEQMNGAELMEQTLTVDWAFSKG 145
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BLAST of mRNA_E-siliculosus-1a_F_contig1120.806.1 vs. uniprot
Match: A0A7S0WPK5_9CHLO (Hypothetical protein n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0WPK5_9CHLO)

HSP 1 Score: 150 bits (379), Expect = 9.870e-41
Identity = 75/132 (56.82%), Postives = 102/132 (77.27%), Query Frame = 0 
Query:  232 KGRGHQGGSMEVEDRYEGRGGVFESVDVGSVGGPQRSVEGWILFVRNVHEEAQEDDIMDKFSEYGAVKNLHVNLDRRTGFVKGYCLVEFEKKEEAQAAIDEMDGSQLLEQDISVSWAFMRGGKGAGQPRRRR 363
            KGRG +  +M+VE R+ G+   +ES++ G+  GP +SVEGWI+ V  VHEEAQEDD+ + F+EYG ++NLH+NLDRRTGFVKGY ++E+E K+EAQAAID ++G+QLL+Q ISV+WAF +G    G P  RR
Sbjct:   40 KGRGFKD-AMDVEQRFTGK---YESLESGTGPGPAKSVEGWIVMVTGVHEEAQEDDLHEAFAEYGEIQNLHLNLDRRTGFVKGYAMLEYESKKEAQAAIDSLNGTQLLDQTISVTWAFSKGPLKKGGPAARR 167
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BLAST of mRNA_E-siliculosus-1a_F_contig1120.806.1 vs. uniprot
Match: A0A0G4H5U6_9ALVE (RRM domain-containing protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4H5U6_9ALVE)

HSP 1 Score: 149 bits (377), Expect = 1.090e-40
Identity = 75/123 (60.98%), Postives = 93/123 (75.61%), Query Frame = 0 
Query:  232 KGRGHQGGS---MEVEDRYEGRGGVFESVDVGSVGGPQRSVEGWILFVRNVHEEAQEDDIMDKFSEYGAVKNLHVNLDRRTGFVKGYCLVEFEKKEEAQAAIDEMDGSQLLEQDISVSWAFMR 351
            KGRG +GG    M   +RYEG+GGVFES+   + G   +SVEGWI+ VR +HEEAQEDDI D FS YG +KNLH+NLDRRTGFVKGY L+E+E+ +EAQAAI  M+G +LL Q + V WAF+R
Sbjct:   23 KGRGGRGGGDADMTDVERYEGQGGVFESLSHDASGTAAKSVEGWIVIVRGLHEEAQEDDIHDSFSGYGEIKNLHLNLDRRTGFVKGYALIEYEQFDEAQAAIHAMNGKELLSQPVHVDWAFVR 145
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BLAST of mRNA_E-siliculosus-1a_F_contig1120.806.1 vs. uniprot
Match: B3RRM4_TRIAD (RNA-binding protein 8A n=2 Tax=Trichoplax TaxID=10227 RepID=B3RRM4_TRIAD)

HSP 1 Score: 150 bits (378), Expect = 1.390e-40
Identity = 79/133 (59.40%), Postives = 98/133 (73.68%), Query Frame = 0 
Query:  232 KGRGHQGGSMEVEDRYEGRGG--VFESVDVGS--VGGPQRSVEGWILFVRNVHEEAQEDDIMDKFSEYGAVKNLHVNLDRRTGFVKGYCLVEFEKKEEAQAAIDEMDGSQLLEQDISVSWAFMRGGKGAGQPR 360
            KGRG Q      +D  E +G    +ES+DV      GPQRSVEGWI+FV N+HEEAQEDD+ +KF+EYG VKNLH+NLDRRTGF+KGY LVEFE K+EAQAAID ++G+ LLEQ I V W F++G + +G  R
Sbjct:   36 KGRGFQ------DDGEEAKGSNLQYESMDVDGDYATGPQRSVEGWIVFVANIHEEAQEDDVYEKFAEYGDVKNLHLNLDRRTGFIKGYALVEFETKKEAQAAIDNLNGTNLLEQTIKVDWCFVKGPQTSGLKR 162
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BLAST of mRNA_E-siliculosus-1a_F_contig1120.806.1 vs. uniprot
Match: A0A7S2V458_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V458_9STRA)

HSP 1 Score: 148 bits (373), Expect = 2.090e-39
Identity = 80/144 (55.56%), Postives = 98/144 (68.06%), Query Frame = 0 
Query:  232 KGRGHQGGSMEVEDRYEGRGGVFESVDVG-------------SVGGPQRSVEGWILFVRNVHEEAQEDDIMDKFSEYGAVKNLHVNLDRRTGFVKGYCLVEFEKKEEAQAAIDEMDGSQLLEQDISVSWAFMRGGKGAGQPRRR 362
            KGRGH G   + ++RY G  G F+++  G             +    QRSVEGWI+FVR VHEEAQEDDI+D FSE+G VKN+HVNLDRRTGFVKGY LVE+E+  EAQAAI EM G +LL Q+++V WAF + G  A   RRR
Sbjct:   61 KGRGHVG--AQTDERYGGASGEFDALGEGVAEAGESTSSTKLAAVAAQRSVEGWIVFVRGVHEEAQEDDILDVFSEFGDVKNIHVNLDRRTGFVKGYALVEYEQLAEAQAAIQEMSGKELLGQEVTVDWAFTKPGGSARGSRRR 202
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1120.806.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KSN1_9PHAE7.190e-10594.27RRM domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A7S2G621_9STRA3.770e-5267.14Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S2DBP5_9STRA2.800e-4865.41Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S3GV69_9STRA8.160e-4766.94Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A7S2S198_9STRA1.630e-4260.98Hypothetical protein n=2 Tax=Rhizochromulina marin... [more]
A0A7S0E2Z3_9CRYP3.460e-4161.16Hypothetical protein n=1 Tax=Hanusia phi TaxID=303... [more]
A0A7S0WPK5_9CHLO9.870e-4156.82Hypothetical protein n=1 Tax=Pyramimonas obovata T... [more]
A0A0G4H5U6_9ALVE1.090e-4060.98RRM domain-containing protein n=1 Tax=Chromera vel... [more]
B3RRM4_TRIAD1.390e-4059.40RNA-binding protein 8A n=2 Tax=Trichoplax TaxID=10... [more]
A0A7S2V458_9STRA2.090e-3955.56Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008111RNA-binding motif protein 8PRINTSPR01738RNABINDINGM8coord: 319..335
score: 45.88
coord: 337..349
score: 50.0
coord: 225..237
score: 36.15
coord: 263..277
score: 84.67
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 273..346
e-value: 7.7E-19
score: 78.6
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 274..341
e-value: 7.5E-18
score: 64.1
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 272..350
score: 15.92
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 172..356
e-value: 2.5E-28
score: 101.0
NoneNo IPR availablePANTHERPTHR45894FAMILY NOT NAMEDcoord: 173..357
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 20..363
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 265..361

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1120contigE-siliculosus-1a_F_contig1120:26928..35299 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1120.806.1mRNA_E-siliculosus-1a_F_contig1120.806.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1120 26928..35649 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1120.806.1 ID=prot_E-siliculosus-1a_F_contig1120.806.1|Name=mRNA_E-siliculosus-1a_F_contig1120.806.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=364bp
MAELARSALISALSPPSSGGERTPAQRSTCRNPPPVKYVSSGSQFETAAS
VHYGVSLRPLSAWHAHSKVLSIPLSLASVGEDTTCGSCGGSWPLDGTPSL
CHTCQIPKCVCPAWRAGRGSRGCCVLLHTTAETASIGSSSESNKPGTAVV
PVRAAGTTTTTTTTTTTTTTNMADEVDFEPEYEEEQPMDDADNGQAGGGE
GQAAGGEDDEEMVGNGGAAAAKGGKGRKGGAKGRGHQGGSMEVEDRYEGR
GGVFESVDVGSVGGPQRSVEGWILFVRNVHEEAQEDDIMDKFSEYGAVKN
LHVNLDRRTGFVKGYCLVEFEKKEEAQAAIDEMDGSQLLEQDISVSWAFM
RGGKGAGQPRRRR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR035979RBD_domain_sf
IPR012677Nucleotide-bd_a/b_plait_sf
IPR000504RRM_dom
IPR008111RNA-bd_8